Data search
Results for MligTC455_40033
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40033 | 407 | 8.47 | Mlig455_052878 | Neo: - Age: - |
TYW1 | Mlig455_052878 {REF} {Length: 3106} {TRANSSPLICED} {Pfam: Wyosine base formation [PF08608.14, score=95.4]; Radical SAM superfamily [PF04055.23, score=92.2]; Flavodoxin [PF00258.27, score=55.2]} {Human: ENSG00000198874, TYW1, tRNA-yW synthesizing protein 1 homolog, [RH, Score=663, Expect=0.0]} {Mouse: ENSMUSG00000056310, Tyw1, tRNA-yW synthesizing protein 1 homolog (S. cerevisiae), [RH, Score=660, Expect=0.0]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=66.6, Expect=4e-11]} {Celegans: WBGene00001262, emb-8, NADPH--cytochrome P450 reductase, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_6762_0_1, dd_Smed_v6_6762_0_1, [RH, Score=708, Expect=0.0]} {RNA1509_12148, RNA1509_18202, RNA1509_32513} {RNA1310_7148, RNA1509_18202, RNA1509_32513} {RNA1509_18202, RNA1509_32513, RNA815_5474.1} |
Cumulative graph for MligTC455_40033
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.088 | 3.593 | 0.04261 | 0.49969 | |
| RegionR2 | 1.003 | 3.593 | 0.26816 | 0.65121 | |
| RegionR3 | 1.259 | 3.593 | 0.07250 | 0.47777 | |
| RegionR4 | 0.686 | 3.593 | 0.45964 | 0.78762 | |
| RegionR5 | 1.357 | 3.593 | 0.03079 | 0.13206 | |
| RegionR6 | 0.667 | 3.593 | 0.43908 | 0.99915 | |
| RegionR7 | 1.363 | 3.593 | 0.08667 | 0.56607 | |
| RegionR8 | 0.753 | 3.593 | 0.46093 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.659 | 3.593 | 0.99978 | 1.00000 | |
| RegenerationR2 | 0.301 | 3.593 | 0.53716 | 0.88691 | |
| RegenerationR3 | -0.164 | 3.593 | 0.75871 | 0.96710 | |
| RegenerationR4 | -0.054 | 3.593 | 0.92471 | 1.00000 | |
| RegenerationR5 | 0.111 | 3.593 | 0.79670 | 0.98767 | |
| RegenerationR6 | 0.968 | 3.593 | 0.06866 | 0.32851 | |
| RegenerationBL | -0.496 | 3.593 | 0.53856 | 0.89782 | |
| RegenerationTP | -1.064 | 3.593 | 0.17414 | 0.60751 |
Genes with expression patterns similar to MligTC455_40033
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40033 | 407 | 8.47 | Mlig455_052878 | Neo: - Age: - |
TYW1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052878 {REF} {Length: 3106} {TRANSSPLICED} {Pfam: Wyosine base formation [PF08608.14, score=95.4]; Radical SAM superfamily [PF04055.23, score=92.2]; Flavodoxin [PF00258.27, score=55.2]} {Human: ENSG00000198874, TYW1, tRNA-yW synthesizing protein 1 homolog, [RH, Score=663, Expect=0.0]} {Mouse: ENSMUSG00000056310, Tyw1, tRNA-yW synthesizing protein 1 homolog (S. cerevisiae), [RH, Score=660, Expect=0.0]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=66.6, Expect=4e-11]} {Celegans: WBGene00001262, emb-8, NADPH--cytochrome P450 reductase, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_6762_0_1, dd_Smed_v6_6762_0_1, [RH, Score=708, Expect=0.0]} {RNA1509_12148, RNA1509_18202, RNA1509_32513} {RNA1310_7148, RNA1509_18202, RNA1509_32513} {RNA1509_18202, RNA1509_32513, RNA815_5474.1} |
| 2. | MligTC455_45670 | 1130 | 23.53 | Mlig455_020255 | Neo: Int S/G2/M Age: - |
PITRM1 | 1.751 | - | - | - | - | 0.794 | 0.957 | Mlig455_020255 {REF} {Length: 3336} {TRANSSPLICED} {Pfam: Peptidase M16C associated [PF08367.13, score=163.4]; Peptidase M16 inactive domain [PF05193.23, score=64.2]; Insulinase (Peptidase family M16) [PF00675.22, score=27.8]} {Human: ENSG00000107959, PITRM1, pitrilysin metallopeptidase 1, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000021193, Pitrm1, pitrilysin metallepetidase 1, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0033005, CG3107, [RH, Score=579, Expect=0.0]} {Celegans: WBGene00015481, C05D11.1, [RH, Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_5873_0_1, dd_Smed_v6_5873_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_5076} {RNA1310_3817, RNA1509_5076} {RNA1509_5076, RNA815_27149} |
| 3. | MligTC455_49874 | 1741 | 36.27 | Mlig455_010874 | Neo: Irradiation Age: - Regeneration-upregulated R6: 1.474 Regeneration-enriched R6: 1.474 |
WDR75 | 1.691 | 0.741 | - | - | - | - | 0.950 | Mlig455_010874 {REF} {Length: 3479} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=19.7]} {Human: ENSG00000115368, WDR75, WD repeat domain 75, [RH, Score=161, Expect=5e-40]} {Mouse: ENSMUSG00000025995, Wdr75, WD repeat domain 75, [RH, Score=142, Expect=4e-34]} {Dmel: FBgn0284251, l(2)05287, lethal (2) 05287, [RH, Score=94.0, Expect=5e-19]} {Smed: dd_Smed_v6_10851_0_1, dd_Smed_v6_10851_0_1, [RH, Score=80.9, Expect=2e-15]} {RNA1509_3469} {RNA1310_3399.1} {RNA815_2983.1} |
| 4. | MligTC455_34114 | 3928 | 81.84 | Mlig455_026815, Mlig455_030877 | Neo: - Age: logFC(26M/2M)=0.377 Regeneration-upregulated R6: 1.453 Regeneration-enriched R6: 1.453 |
EIF4B | 0.96 | - | - | - | - | - | 0.960 | Mlig455_026815 {REF} {Length: 3862} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.5]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=4e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=3e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1} Mlig455_030877 {REF} {Length: 3839} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.7]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.3, Expect=2e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [Score=65.1, Expect=2e-10]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=84.7, Expect=3e-17]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=56.2, Expect=4e-08]} {RNA1509_1253} {RNA1310_2611} {RNA815_2592.1} |
| 5. | MligTC455_25047 | 135 | 2.82 | Mlig455_041213 | Neo: - Age: - |
RNF31 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_041213 {REF} {Length: 3533} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=39.2]; E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=27.3]; Domain of unknown function (DUF4573) [PF15140.8, score=21.0]} {Human: ENSG00000285152, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000092098, RNF31, ring finger protein 31, [Score=188, Expect=2e-49]; ENSG00000284845, AL136295.10, novel transcript, [Score=185, Expect=3e-50]; ENSG00000259529, AL136295.5, novel transcript, [Score=185, Expect=3e-50]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=184, Expect=3e-48]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=171, Expect=7e-44]} {Smed: dd_Smed_v6_4074_0_1, dd_Smed_v6_4074_0_1, [RH, Score=134, Expect=1e-32]} {RNA1509_18940} {RNA1310_17723.1} {RNA815_23151} |
| 6. | MligTC455_34113 | 1984 | 41.33 | Mlig455_017524 | Neo: - Age: - |
EIF4B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_017524 {REF} {Length: 4615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.1]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=3e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=2e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=7e-19]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1} |
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