TomoSeq data search

Data search

Results for MligTC455_40079

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40079	154	3.21	Mlig455_046188	Neo: - Age: -	SPATA4	Mlig455_046188 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: CH-like domain in sperm protein [PF06294.13, score=103.8]; CAMSAP CH domain [PF11971.10, score=48.9]} {Human: ENSG00000150628, SPATA4, spermatogenesis associated 4, [RH, Score=144, Expect=8e-41]} {Mouse: ENSMUSG00000031518, Spata4, spermatogenesis associated 4, [RH, Score=126, Expect=2e-34]} {Smed: dd_Smed_v6_5824_0_1, dd_Smed_v6_5824_0_1, [RH, Score=186, Expect=2e-58]} {RNA1509_15917} {RNA1310_16432.1} {RNA815_1825.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40079

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	3.635	2.266	0.03306	0.45969
RegionR2	-0.566	2.266	0.60805	0.95638
RegionR3	-1.907	2.266	0.07426	0.48291
RegionR4	-0.135	2.266	0.91509	1.00000
RegionR5	0.269	2.266	0.72701	1.00000
RegionR6	-0.946	2.266	0.34523	0.93143
RegionR7	-0.125	2.266	0.92563	1.00000
RegionR8	-0.224	2.266	0.89317	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.84	2.266	0.07743	0.76967
RegenerationR2	0.425	2.266	0.65565	0.93880
RegenerationR3	2.024	2.266	0.09231	0.48963
RegenerationR4	0.942	2.266	0.40054	0.81388
RegenerationR5	0.345	2.266	0.73067	0.96414
RegenerationR6	0.427	2.266	0.70502	0.92753
RegenerationBL	1.202	2.266	0.30019	0.66354
RegenerationTP	1.44	2.266	0.25395	0.70181

Genes with expression patterns similar to MligTC455_40079

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40079	154	3.21	Mlig455_046188	Neo: - Age: -	SPATA4	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_046188 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: CH-like domain in sperm protein [PF06294.13, score=103.8]; CAMSAP CH domain [PF11971.10, score=48.9]} {Human: ENSG00000150628, SPATA4, spermatogenesis associated 4, [RH, Score=144, Expect=8e-41]} {Mouse: ENSMUSG00000031518, Spata4, spermatogenesis associated 4, [RH, Score=126, Expect=2e-34]} {Smed: dd_Smed_v6_5824_0_1, dd_Smed_v6_5824_0_1, [RH, Score=186, Expect=2e-58]} {RNA1509_15917} {RNA1310_16432.1} {RNA815_1825.1}
2.	MligTC455_46850	265	5.52	Mlig455_005746	Neo: - Age: - Region-enriched R4: 2.659/0.01708		0.964	-	-	-	-	-	0.964	Mlig455_005746 {REF} {Length: 3392} {Pfam: Coiled-coil domain-containing protein 158 [PF15921.7, score=48.5]} {Mouse: ENSMUSG00000050050, Ccdc158, coiled-coil domain containing 158, [RH, Score=84.7, Expect=3e-16]} {Smed: dd_Smed_v6_10831_0_1, dd_Smed_v6_10831_0_1, [RH, Score=68.9, Expect=1e-11]} {RNA1509_46369, RNA1509_7522} {RNA1310_3662, RNA1509_46369, RNA1509_7522} {RNA1509_46369, RNA1509_7522, RNA815_5689}
3.	MligTC455_46126	731	15.24	Mlig455_003869	Neo: Int S/G2/M Age: - Region-enriched R5: 1.409/0.00318	N6AMT1	0.95	-	-	-	-	0.950	-	Mlig455_003869 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=18.4]} {Human: ENSG00000156239, N6AMT1, N-6 adenine-specific DNA methyltransferase 1, [RH, Score=132, Expect=8e-38]} {Mouse: ENSMUSG00000044442, N6amt1, N-6 adenine-specific DNA methyltransferase 1 (putative), [RH, Score=134, Expect=9e-39]} {Dmel: FBgn0031454, CG9960, [RH, Score=137, Expect=6e-40]} {Celegans: WBGene00016341, mtq-2, MethylTransferase modifying glutamine (Q), [RH, Score=98.2, Expect=5e-25]} {Smed: dd_Smed_v6_17664_0_1, dd_Smed_v6_17664_0_1, [RH, Score=64.7, Expect=2e-13]} {RNA1509_18833, RNA1509_27218} {RNA1310_46701, RNA1509_18833, RNA1509_27218} {RNA1509_18833, RNA1509_27218, RNA815_23131}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40079

154

3.21

Mlig455_046188

Neo: -

Age: -

SPATA4

1.000

MligTC455_46850

265

5.52

Mlig455_005746

Neo: -

Age: -

Region-enriched R4: 2.659/0.01708

0.964

Mlig455_005746 {REF} {Length: 3392} {Pfam: Coiled-coil domain-containing protein 158 [PF15921.7, score=48.5]} {Mouse: ENSMUSG00000050050, Ccdc158, coiled-coil domain containing 158, [RH, Score=84.7, Expect=3e-16]} {Smed: dd_Smed_v6_10831_0_1, dd_Smed_v6_10831_0_1, [RH, Score=68.9, Expect=1e-11]} {RNA1509_46369, RNA1509_7522} {RNA1310_3662, RNA1509_46369, RNA1509_7522} {RNA1509_46369, RNA1509_7522, RNA815_5689}

MligTC455_46126

731

15.24

Mlig455_003869

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.409/0.00318

N6AMT1

0.95

0.950

Mlig455_003869 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=18.4]} {Human: ENSG00000156239, N6AMT1, N-6 adenine-specific DNA methyltransferase 1, [RH, Score=132, Expect=8e-38]} {Mouse: ENSMUSG00000044442, N6amt1, N-6 adenine-specific DNA methyltransferase 1 (putative), [RH, Score=134, Expect=9e-39]} {Dmel: FBgn0031454, CG9960, [RH, Score=137, Expect=6e-40]} {Celegans: WBGene00016341, mtq-2, MethylTransferase modifying glutamine (Q), [RH, Score=98.2, Expect=5e-25]} {Smed: dd_Smed_v6_17664_0_1, dd_Smed_v6_17664_0_1, [RH, Score=64.7, Expect=2e-13]} {RNA1509_18833, RNA1509_27218} {RNA1310_46701, RNA1509_18833, RNA1509_27218} {RNA1509_18833, RNA1509_27218, RNA815_23131}