TomoSeq data search

Data search

Results for MligTC455_40087

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40087

763

15.89

Mlig455_022164, Mlig455_055774

Neo: -

Age: -

Mlig455_022164 {REF} {Length: 1576} {Pfam: Seven in absentia protein family [PF03145.18, score=23.7]} {RNA1509_15932, RNA1509_55879} {RNA1310_24233, RNA1509_15932, RNA1509_55879} {RNA1509_15932, RNA1509_55879, RNA815_39645}

Mlig455_055774 {REF} {Length: 1956} {Pfam: Seven in absentia protein family [PF03145.18, score=23.8]} {RNA1509_15932, RNA1509_44286} {RNA1310_24233, RNA1509_44286} {RNA1509_44286, RNA815_39645}

Cumulative graph for MligTC455_40087

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.155	4.326	0.86791	1.00000
RegionR2	0.586	4.326	0.23899	0.61341
RegionR3	0.561	4.326	0.13593	0.63062
RegionR4	0.033	4.326	0.93928	1.00000
RegionR5	0.306	4.326	0.36664	0.71933
RegionR6	0.272	4.326	0.48075	1.00000
RegionR7	-1.15	4.326	0.06342	0.48403
RegionR8	-0.763	4.326	0.31367	0.94596

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.726	4.326	0.55284	1.00000
RegenerationR2	-0.248	4.326	0.55577	0.89623
RegenerationR3	-0.072	4.326	0.87268	1.00000
RegenerationR4	-0.247	4.326	0.57871	0.90501
RegenerationR5	-0.241	4.326	0.55970	0.89088
RegenerationR6	-0.624	4.326	0.18670	0.52317
RegenerationBL	0.56	4.326	0.34958	0.71690
RegenerationTP	0.852	4.326	0.20759	0.64931

Genes with expression patterns similar to MligTC455_40087

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40087	763	15.89	Mlig455_022164, Mlig455_055774	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022164 {REF} {Length: 1576} {Pfam: Seven in absentia protein family [PF03145.18, score=23.7]} {RNA1509_15932, RNA1509_55879} {RNA1310_24233, RNA1509_15932, RNA1509_55879} {RNA1509_15932, RNA1509_55879, RNA815_39645} Mlig455_055774 {REF} {Length: 1956} {Pfam: Seven in absentia protein family [PF03145.18, score=23.8]} {RNA1509_15932, RNA1509_44286} {RNA1310_24233, RNA1509_44286} {RNA1509_44286, RNA815_39645}
2.	MligTC455_48250	988	20.58	Mlig455_035949	Neo: Int S/G2/M Age: -	COA7	1.683	-	-	-	-	0.950	0.733	Mlig455_035949 {REF} {Length: 1706} {TRANSSPLICED} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [RH, Score=61.6, Expect=1e-10]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [RH, Score=65.1, Expect=5e-12]} {Celegans: WBGene00013925, ZK20.4, Cytochrome c oxidase assembly factor 7 homolog, [RH, Score=66.6, Expect=7e-13]} {Smed: dd_Smed_v6_7923_0_1, dd_Smed_v6_7923_0_1, [RH, Score=73.9, Expect=1e-15]} {RNA1509_13019, RNA1509_3437} {RNA1310_27134, RNA1509_13019, RNA1509_3437} {RNA1509_13019, RNA1509_3437, RNA815_18869}
3.	MligTC455_52088	452	9.42	Mlig455_059060	Neo: Int S/G2/M Age: - Region-enriched R4: 2.347/0.00449	TIMM17B	1.661	-	-	-	-	0.706	0.955	Mlig455_059060 {REF} {Length: 1823} {Pfam: Tim17/Tim22/Tim23/Pmp24 family [PF02466.21, score=98.5]} {Human: ENSG00000126768, TIMM17B, translocase of inner mitochondrial membrane 17B, [RH, Score=167, Expect=2e-53]; ENSG00000134375, TIMM17A, translocase of inner mitochondrial membrane 17A, [RH, Score=167, Expect=2e-53]} {Mouse: ENSMUSG00000062580, Timm17a, translocase of inner mitochondrial membrane 17a, [RH, Score=172, Expect=2e-55]; ENSMUSG00000031158, Timm17b, translocase of inner mitochondrial membrane 17b, [RH, Score=167, Expect=2e-53]} {Dmel: FBgn0263977, Tim17b, Translocase of the inner mitochondrial membrane 17b, [RH, Score=170, Expect=1e-54]} {Celegans: WBGene00017119, timm-17B.1, Probable mitochondrial import inner membrane translocase subunit Tim17, [RH, Score=145, Expect=1e-44]} {Smed: dd_Smed_v6_904_0_1, dd_Smed_v6_904_0_1, [RH, Score=174, Expect=1e-56]} {RNA1509_31826} {RNA1310_19314.1, RNA1509_31826} {RNA1509_31826, RNA815_21108}
4.	MligTC455_46085	956	19.92	Mlig455_027731	Neo: - Age: - Region-enriched R4: 1.630/0.00149	HSD17B6	0.953	-	-	-	-	-	0.953	Mlig455_027731 {REF} {Length: 1394} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=153.4]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=106.6]; KR domain [PF08659.12, score=39.6]} {Human: ENSG00000025423, HSD17B6, hydroxysteroid 17-beta dehydrogenase 6, [RH, Score=221, Expect=1e-69]; ENSG00000170426, SDR9C7, short chain dehydrogenase/reductase family 9C member 7, [RH, Score=218, Expect=1e-68]; ENSG00000139547, RDH16, retinol dehydrogenase 16, [RH, Score=216, Expect=1e-67]; ENSG00000135437, RDH5, retinol dehydrogenase 5, [RH, Score=212, Expect=3e-66]} {Mouse: ENSMUSG00000069456, Rdh16, retinol dehydrogenase 16, [RH, Score=221, Expect=1e-69]; ENSMUSG00000056148, Rdh9, retinol dehydrogenase 9, [RH, Score=221, Expect=9e-70]; ENSMUSG00000099009, Rdh16f1, RDH16 family member 1, [RH, Score=221, Expect=1e-69]; ENSMUSG00000074639, Rdh16f2, RDH16 family member 2, [RH, Score=219, Expect=7e-69]; ENSMUSG00000089789, Rdh1, retinol dehydrogenase 1 (all trans), [RH, Score=214, Expect=4e-67]; ENSMUSG00000025350, Rdh5, retinol dehydrogenase 5, [RH, Score=213, Expect=2e-66]; ENSMUSG00000054052, Rdh19, retinol dehydrogenase 19, [RH, Score=211, Expect=9e-66]} {Dmel: FBgn0029648, CG3603, [Score=84.7, Expect=1e-18]} {Celegans: WBGene00000983, dhs-20, DeHydrogenases, Short chain, [RH, Score=205, Expect=2e-63]} {Smed: dd_Smed_v6_8012_0_1, dd_Smed_v6_8012_0_1, [RH, Score=148, Expect=8e-42]} {RNA1509_13933, RNA1509_18802} {RNA1310_23644.2, RNA1509_13933, RNA1509_18802} {RNA1509_13933, RNA1509_18802, RNA815_10017}
5.	MligTC455_47758	2550	53.13	Mlig455_054048	Neo: - Age: Down-Down-Up		0.95	-	-	-	-	0.950	-	Mlig455_054048 {REF} {Length: 519} {RNA1509_19736, RNA1509_4013} {RNA1310_58710.1, RNA1509_19736, RNA1509_4013} {RNA1509_19736, RNA1509_4013, RNA815_24456}

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