Data search
Results for MligTC455_40088
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40088 | 504 | 10.49 | Mlig455_053560 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.734/0.00534 |
C9orf135 | Mlig455_053560 {REF} {Length: 1105} {Pfam: Domain of unknown function (DUF4572) [PF15139.8, score=151.8]} {Human: ENSG00000204711, C9orf135, chromosome 9 open reading frame 135, [RH, Score=108, Expect=3e-28]} {Mouse: ENSMUSG00000033053, 1700028P14Rik, RIKEN cDNA 1700028P14 gene, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_8797_0_1, dd_Smed_v6_8797_0_1, [RH, Score=124, Expect=4e-35]} {RNA1509_34777} {RNA1310_27695.1} {RNA815_12226} |
Cumulative graph for MligTC455_40088
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.148 | 3.769 | 0.89029 | 1.00000 | |
| RegionR2 | 1.734 | 3.769 | 0.00015 | 0.00534 | |
| RegionR3 | 0.619 | 3.769 | 0.06533 | 0.45111 | |
| RegionR4 | -0.567 | 3.769 | 0.20943 | 0.49351 | |
| RegionR5 | -0.631 | 3.769 | 0.06053 | 0.21452 | |
| RegionR6 | 0.063 | 3.769 | 0.86673 | 1.00000 | |
| RegionR7 | -0.958 | 3.769 | 0.10871 | 0.62596 | |
| RegionR8 | -0.112 | 3.769 | 0.86430 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.969 | 3.769 | 0.50737 | 1.00000 | |
| RegenerationR2 | -0.248 | 3.769 | 0.45216 | 0.84841 | |
| RegenerationR3 | 0.09 | 3.769 | 0.81853 | 0.98704 | |
| RegenerationR4 | 0.343 | 3.769 | 0.42691 | 0.82913 | |
| RegenerationR5 | -0.365 | 3.769 | 0.36460 | 0.77531 | |
| RegenerationR6 | -0.953 | 3.769 | 0.05361 | 0.29010 | |
| RegenerationBL | 0.183 | 3.769 | 0.78236 | 1.00000 | |
| RegenerationTP | -1.052 | 3.769 | 0.20901 | 0.65079 |
Genes with expression patterns similar to MligTC455_40088
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40088 | 504 | 10.49 | Mlig455_053560 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.734/0.00534 |
C9orf135 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053560 {REF} {Length: 1105} {Pfam: Domain of unknown function (DUF4572) [PF15139.8, score=151.8]} {Human: ENSG00000204711, C9orf135, chromosome 9 open reading frame 135, [RH, Score=108, Expect=3e-28]} {Mouse: ENSMUSG00000033053, 1700028P14Rik, RIKEN cDNA 1700028P14 gene, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_8797_0_1, dd_Smed_v6_8797_0_1, [RH, Score=124, Expect=4e-35]} {RNA1509_34777} {RNA1310_27695.1} {RNA815_12226} |
| 2. | MligTC455_49821 | 2230 | 46.46 | Mlig455_008776, Mlig455_008813 | Neo: - |
2.526 | - | 0.829 | 0.745 | 0.952 | - | - | Mlig455_008776 {REF} {Length: 834} {RNA1509_24401} {RNA1310_40742} {RNA815_19348} Mlig455_008813 {REF} {Length: 935} {RNA1509_24401, RNA1509_44113} {RNA1310_40742, RNA1509_24401, RNA1509_44113} {RNA1509_24401, RNA1509_44113, RNA815_19348} |
|
| 3. | MligTC455_21542 | 450 | 9.38 | Mlig455_048019 | Neo: - Age: - |
TBC1D32 | 2.494 | - | - | 0.955 | - | 0.833 | 0.706 | Mlig455_048019 {REF} {Length: 4789} {TRANSSPLICED} {Pfam: Broad-minded protein [PF14961.8, score=920.1]} {Human: ENSG00000146350, TBC1D32, TBC1 domain family member 32, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000038122, Tbc1d32, TBC1 domain family, member 32, [RH, Score=639, Expect=0.0]} {Smed: dd_Smed_v6_16049_0_1, dd_Smed_v6_16049_0_1, [RH, Score=506, Expect=5e-157]} {RNA1509_53921, RNA1509_6706} {RNA1310_1384, RNA1509_53921} {RNA1509_53921, RNA815_17065} |
| 4. | MligTC455_52199 | 1032 | 21.49 | Mlig455_031255, Mlig455_031301 | Neo: - Age: Down-Down-Up |
1.787 | - | - | 0.829 | 0.958 | - | - | Mlig455_031255 {REF} {Length: 1896} {Pfam: Innexin [PF00876.20, score=210.3]} {Celegans: WBGene00002127, inx-5, Innexin-5, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=139, Expect=1e-36]} {RNA1509_2324} {RNA1310_13247} {RNA815_6165.1} Mlig455_031301 {REF} {Length: 2187} {Pfam: Innexin [PF00876.20, score=210.3]} {Celegans: WBGene00002127, inx-5, Innexin-5, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=139, Expect=2e-36]} {RNA1509_2324} {RNA1310_13247} {RNA815_6165.1} |
|
| 5. | MligTC455_39264 | 466 | 9.71 | Mlig455_025156, Mlig455_063918 | Neo: - Age: Down-Up-Down |
ZAN | 1.774 | - | - | 0.961 | 0.813 | - | - | Mlig455_025156 {REF} {Length: 4121} {RNA1509_26470, RNA1509_50938} {RNA1310_7875, RNA1509_26470} {RNA1509_26470, RNA815_14212} Mlig455_063918 {REF} {Length: 3617} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=98.6, Expect=3e-20]} {Mouse: ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [Score=68.2, Expect=3e-11]} {RNA1509_50938} {RNA1310_7875} {RNA815_14212} |
| 6. | MligTC455_39265 | 459 | 9.57 | Mlig455_025157, Mlig455_063935 | Neo: - Age: Down-Up-Down |
PRX | 1.757 | - | - | 0.950 | 0.807 | - | - | Mlig455_025157 {REF} {Length: 1721} {RNA1509_50938} {RNA1310_45103} {RNA815_28196.1} Mlig455_063935 {REF} {Length: 4827} {Human: ENSG00000105227, PRX, periaxin, [Score=66.6, Expect=3e-10]} {RNA1509_50938} {RNA1310_7875} {RNA815_14212} |
| 7. | MligTC455_17221 | 720 | 14.99 | Mlig455_060863 | Neo: - Age: logFC(26M/2M)=-0.303 |
1.726 | - | - | - | - | 0.955 | 0.771 | Mlig455_060863 {REF} {Length: 1498} {RNA1509_54942, RNA1509_56041} {RNA1310_43309, RNA1509_54942, RNA1509_56041} {RNA1509_54942, RNA1509_56041, RNA815_43486} | |
| 8. | MligTC455_38601 | 233 | 4.86 | Mlig455_028048, Mlig455_028113 | Neo: - Age: - |
CCDC87 | 1.663 | - | - | 0.956 | - | - | 0.707 | Mlig455_028048 {REF} {Length: 3136} {Mouse: ENSMUSG00000067872, Ccdc87, coiled-coil domain containing 87, [Score=57.0, Expect=7e-08]} {Smed: dd_Smed_v6_12480_0_1, dd_Smed_v6_12480_0_1, [Score=145, Expect=6e-36]} {RNA1509_8830} {RNA1310_2448.2} {RNA815_4309} Mlig455_028113 {REF} {Length: 4779} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=22.7]} {Human: ENSG00000182791, CCDC87, coiled-coil domain containing 87, [RH, Score=116, Expect=8e-26]} {Mouse: ENSMUSG00000067872, Ccdc87, coiled-coil domain containing 87, [RH, Score=112, Expect=1e-24]} {Smed: dd_Smed_v6_12480_0_1, dd_Smed_v6_12480_0_1, [RH, Score=326, Expect=6e-96]} {RNA1509_8830} {RNA1310_2448.2} {RNA815_4309} |
| 9. | MligTC455_33815 | 198 | 4.12 | Mlig455_022796 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_022796 {REF} {Length: 2958} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=42.8]} {RNA1509_16121} {RNA1310_21438, RNA1509_16121} {RNA1509_16121, RNA815_8890.1} |
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