TomoSeq data search

Data search

Results for MligTC455_40103

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40103	912	19.00	Mlig455_036712	Neo: - Age: -	PTPN1	Mlig455_036712 {REF} {Length: 4572} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=197.8]} {Human: ENSG00000196396, PTPN1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=258, Expect=8e-77]} {Mouse: ENSMUSG00000027540, Ptpn1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=260, Expect=1e-77]} {Dmel: FBgn0267487, Ptp61F, Protein tyrosine phosphatase 61F, [RH, Score=235, Expect=9e-68]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_5710_0_1, dd_Smed_v6_5710_0_1, [RH, Score=234, Expect=5e-68]} {RNA1509_36361, RNA1509_49706, RNA1509_55728, RNA1509_6521} {RNA1310_3969.1, RNA1509_36361, RNA1509_49706, RNA1509_55728} {RNA1509_36361, RNA1509_49706, RNA1509_55728, RNA815_4069}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40103

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.433	4.461	0.62891	1.00000
RegionR2	-0.105	4.461	0.77484	1.00000
RegionR3	0.149	4.461	0.61997	1.00000
RegionR4	0.522	4.461	0.13863	0.37961
RegionR5	0.553	4.461	0.04362	0.16977
RegionR6	0.181	4.461	0.56203	1.00000
RegionR7	-0.655	4.461	0.14204	0.70376
RegionR8	-0.212	4.461	0.67801	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.45	4.461	0.35531	1.00000
RegenerationR2	0.149	4.461	0.62448	0.92463
RegenerationR3	-0.343	4.461	0.31112	0.74179
RegenerationR4	-0.36	4.461	0.29134	0.73489
RegenerationR5	-0.097	4.461	0.74709	0.97084
RegenerationR6	-0.686	4.461	0.05877	0.30423
RegenerationBL	-0.589	4.461	0.21916	0.56617
RegenerationTP	0.452	4.461	0.32431	0.76856

Genes with expression patterns similar to MligTC455_40103

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40103	912	19	Mlig455_036712	Neo: - Age: -	PTPN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036712 {REF} {Length: 4572} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=197.8]} {Human: ENSG00000196396, PTPN1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=258, Expect=8e-77]} {Mouse: ENSMUSG00000027540, Ptpn1, protein tyrosine phosphatase, non-receptor type 1, [RH, Score=260, Expect=1e-77]} {Dmel: FBgn0267487, Ptp61F, Protein tyrosine phosphatase 61F, [RH, Score=235, Expect=9e-68]} {Celegans: WBGene00009717, dep-1, Receptor-type tyrosine-protein phosphatase dep-1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_5710_0_1, dd_Smed_v6_5710_0_1, [RH, Score=234, Expect=5e-68]} {RNA1509_36361, RNA1509_49706, RNA1509_55728, RNA1509_6521} {RNA1310_3969.1, RNA1509_36361, RNA1509_49706, RNA1509_55728} {RNA1509_36361, RNA1509_49706, RNA1509_55728, RNA815_4069}
2.	MligTC455_19504	318	6.62	Mlig455_018471	Neo: - Age: - Region-enriched R5: 1.265/0.02878	ULK2	0.968	-	-	-	0.968	-	-	Mlig455_018471 {REF} {Length: 3818} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=214.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.0]; Domain of unknown function (DUF3543) [PF12063.10, score=39.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; RIO1 family [PF01163.24, score=20.6]} {Human: ENSG00000083290, ULK2, unc-51 like autophagy activating kinase 2, [RH, Score=340, Expect=2e-102]; ENSG00000177169, ULK1, unc-51 like autophagy activating kinase 1, [RH, Score=330, Expect=8e-99]} {Mouse: ENSMUSG00000004798, Ulk2, unc-51 like kinase 2, [RH, Score=336, Expect=3e-101]; ENSMUSG00000029512, Ulk1, unc-51 like kinase 1, [RH, Score=328, Expect=4e-98]} {Dmel: FBgn0260945, Atg1, Autophagy-related 1, [RH, Score=354, Expect=1e-109]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [RH, Score=348, Expect=1e-107]} {Smed: dd_Smed_v6_10237_0_1, dd_Smed_v6_10237_0_1, [RH, Score=275, Expect=3e-86]} {RNA1509_9723} {RNA1310_2515, RNA1509_9723} {RNA1509_9723, RNA815_13206}
3.	MligTC455_31478	1530	31.87	Mlig455_057710, Mlig455_059966	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.195 Region-enriched R5: 1.009/0.00532	SLC30A1	0.956	-	-	-	0.956	-	-	Mlig455_057710 {REF} {Length: 4455} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=157.0]} {Human: ENSG00000170385, SLC30A1, solute carrier family 30 member 1, [Score=152, Expect=1e-39]} {Mouse: ENSMUSG00000110850, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]; ENSMUSG00000037434, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0035432, ZnT63C, Zinc transporter 63C, [Score=151, Expect=7e-40]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_3042_0_1, dd_Smed_v6_3042_0_1, [Score=194, Expect=4e-56]} {RNA1509_10863} {RNA1310_14042, RNA1509_10863} {RNA1509_10863, RNA815_7446} Mlig455_059966 {REF} {Length: 4319} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=156.6]} {Human: ENSG00000170385, SLC30A1, solute carrier family 30 member 1, [Score=152, Expect=2e-39]} {Mouse: ENSMUSG00000037434, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]; ENSMUSG00000110850, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0035432, ZnT63C, Zinc transporter 63C, [Score=151, Expect=4e-40]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=90.9, Expect=4e-19]} {Smed: dd_Smed_v6_3042_0_1, dd_Smed_v6_3042_0_1, [Score=192, Expect=2e-55]} {RNA1509_10863} {RNA1310_14042} {RNA815_7446}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40103

912

Mlig455_036712

Neo: -

Age: -

PTPN1

1.000

MligTC455_19504

318

6.62

Mlig455_018471

Neo: -

Age: -

Region-enriched R5: 1.265/0.02878

ULK2

0.968

Mlig455_018471 {REF} {Length: 3818} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=214.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.0]; Domain of unknown function (DUF3543) [PF12063.10, score=39.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; RIO1 family [PF01163.24, score=20.6]} {Human: ENSG00000083290, ULK2, unc-51 like autophagy activating kinase 2, [RH, Score=340, Expect=2e-102]; ENSG00000177169, ULK1, unc-51 like autophagy activating kinase 1, [RH, Score=330, Expect=8e-99]} {Mouse: ENSMUSG00000004798, Ulk2, unc-51 like kinase 2, [RH, Score=336, Expect=3e-101]; ENSMUSG00000029512, Ulk1, unc-51 like kinase 1, [RH, Score=328, Expect=4e-98]} {Dmel: FBgn0260945, Atg1, Autophagy-related 1, [RH, Score=354, Expect=1e-109]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [RH, Score=348, Expect=1e-107]} {Smed: dd_Smed_v6_10237_0_1, dd_Smed_v6_10237_0_1, [RH, Score=275, Expect=3e-86]} {RNA1509_9723} {RNA1310_2515, RNA1509_9723} {RNA1509_9723, RNA815_13206}

MligTC455_31478

1530

31.87

Mlig455_057710, Mlig455_059966

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.195

Region-enriched R5: 1.009/0.00532

SLC30A1

0.956

Mlig455_057710 {REF} {Length: 4455} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=157.0]} {Human: ENSG00000170385, SLC30A1, solute carrier family 30 member 1, [Score=152, Expect=1e-39]} {Mouse: ENSMUSG00000110850, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]; ENSMUSG00000037434, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0035432, ZnT63C, Zinc transporter 63C, [Score=151, Expect=7e-40]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_3042_0_1, dd_Smed_v6_3042_0_1, [Score=194, Expect=4e-56]} {RNA1509_10863} {RNA1310_14042, RNA1509_10863} {RNA1509_10863, RNA815_7446}

Mlig455_059966 {REF} {Length: 4319} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=156.6]} {Human: ENSG00000170385, SLC30A1, solute carrier family 30 member 1, [Score=152, Expect=2e-39]} {Mouse: ENSMUSG00000037434, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]; ENSMUSG00000110850, Slc30a1, solute carrier family 30 (zinc transporter), member 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0035432, ZnT63C, Zinc transporter 63C, [Score=151, Expect=4e-40]} {Celegans: WBGene00000393, cdf-1, Cation diffusion facilitator family protein 1, [Score=90.9, Expect=4e-19]} {Smed: dd_Smed_v6_3042_0_1, dd_Smed_v6_3042_0_1, [Score=192, Expect=2e-55]} {RNA1509_10863} {RNA1310_14042} {RNA815_7446}