Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_40126 | 29 | 0.60 | Mlig455_070399 | Neo: - Age: Up-Down-Down |
KIF1A | Mlig455_070399 {REF} {Length: 4059} {Pfam: Kinesin motor domain [PF00225.25, score=336.4]; Microtubule binding [PF16796.7, score=68.9]; Kinesin protein 1B [PF12423.10, score=40.0]; Kinesin-associated [PF16183.7, score=28.4]} {Human: ENSG00000130294, KIF1A, kinesin family member 1A, [Score=406, Expect=5e-121]; ENSG00000054523, KIF1B, kinesin family member 1B, [Score=404, Expect=2e-123]; ENSG00000137177, KIF13A, kinesin family member 13A, [Score=403, Expect=8e-120]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=399, Expect=5e-118]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=397, Expect=3e-121]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=567, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=416, Expect=2e-124]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=817, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=622, Expect=0.0]} {RNA1509_6760} {RNA1310_1667.1} {RNA815_1144} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 2.016 | 0.984 | 0.97246 | 1.00000 | |
RegionR2 | -1.565 | 0.984 | 0.99994 | 1.00000 | |
RegionR3 | -1.548 | 0.984 | 0.99923 | 1.00000 | |
RegionR4 | 2.721 | 0.984 | 0.13530 | 0.37384 | |
RegionR5 | -1.108 | 0.984 | 0.99619 | 1.00000 | |
RegionR6 | -0.488 | 0.984 | 0.99099 | 1.00000 | |
RegionR7 | 0.336 | 0.984 | 0.94160 | 1.00000 | |
RegionR8 | -0.364 | 0.984 | 0.99075 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -4.347 | 0.984 | 0.99981 | 1.00000 | |
RegenerationR2 | 0.887 | 0.984 | 0.45579 | 0.85029 | |
RegenerationR3 | -2.663 | 0.984 | 0.11446 | 0.52825 | |
RegenerationR4 | -2.242 | 0.984 | 0.11847 | 0.52416 | |
RegenerationR5 | -0.523 | 0.984 | 0.60008 | 0.91019 | |
RegenerationR6 | -2.033 | 0.984 | 0.14972 | 0.47394 | |
RegenerationBL | -4.058 | 0.984 | 0.17008 | 0.49447 | |
RegenerationTP | -1.935 | 0.984 | 0.33097 | 0.77516 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_40126 | 29 | 0.6 | Mlig455_070399 | Neo: - Age: Up-Down-Down |
KIF1A | 2 | 1.000 | - | - | - | - | 1.000 | Mlig455_070399 {REF} {Length: 4059} {Pfam: Kinesin motor domain [PF00225.25, score=336.4]; Microtubule binding [PF16796.7, score=68.9]; Kinesin protein 1B [PF12423.10, score=40.0]; Kinesin-associated [PF16183.7, score=28.4]} {Human: ENSG00000130294, KIF1A, kinesin family member 1A, [Score=406, Expect=5e-121]; ENSG00000054523, KIF1B, kinesin family member 1B, [Score=404, Expect=2e-123]; ENSG00000137177, KIF13A, kinesin family member 13A, [Score=403, Expect=8e-120]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=399, Expect=5e-118]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=397, Expect=3e-121]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=567, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=416, Expect=2e-124]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=817, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=622, Expect=0.0]} {RNA1509_6760} {RNA1310_1667.1} {RNA815_1144} |
2. | MligTC455_11278 | 56 | 1.16 | Mlig455_013045 | Neo: - Age: - |
0.978 | - | - | - | - | - | 0.978 | Mlig455_013045 {REF} {Length: 729} {NoTransDecoderORF} {RNA1509_9476} {RNA1310_99761.2} {RNA815_5110.1} | |
3. | MligTC455_52128 | 26 | 0.54 | Mlig455_056382 | Neo: - Age: - |
0.974 | - | - | - | - | - | 0.974 | Mlig455_056382 {REF} {Length: 892} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=20.5]; Ankyrin repeat [PF00023.32, score=19.7]} {RNA1310_149618} | |
4. | MligTC455_38881 | 40 | 0.84 | Mlig455_012081 | Neo: - Age: - |
0.973 | - | - | - | - | - | 0.973 | Mlig455_012081 {REF} {Length: 446} {NoTransDecoderORF} {RNA1310_49929.1} {RNA815_64667} | |
5. | MligTC455_09277 | 21 | 0.44 | Mlig455_048345 | Neo: - Age: - Regeneration-upregulated R2: 6.135 Regeneration-enriched R2: 6.135 |
0.972 | - | - | - | - | - | 0.972 | Mlig455_048345 {REF} {Length: 1499} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=19.5]} {RNA1310_58579} | |
6. | MligTC455_50053 | 284 | 5.92 | Mlig455_030746 | Neo: - Age: - Region-enriched R2: 1.768/0.02980 |
STOM | 0.971 | - | - | - | - | - | 0.971 | Mlig455_030746 {REF} {Length: 2635} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=58.5]} {Human: ENSG00000148175, STOM, stomatin, [Score=257, Expect=7e-85]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=253, Expect=2e-83]} {Dmel: FBgn0260657, CG42540, [Score=262, Expect=9e-86]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=275, Expect=6e-91]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=304, Expect=4e-104]} {RNA1509_53478} {RNA1310_8094.2} {RNA815_8739} |
7. | MligTC455_21424 | 38 | 0.79 | Mlig455_006171 | Neo: - Age: - Regeneration-enriched BL: 6.602 |
ALKBH3 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_006171 {REF} {Length: 1406} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13532.8, score=97.0]} {Human: ENSG00000166199, ALKBH3, alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, [Score=108, Expect=3e-26]} {Mouse: ENSMUSG00000040174, Alkbh3, alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase, [Score=110, Expect=6e-27]} {Smed: dd_Smed_v6_7441_0_1, dd_Smed_v6_7441_0_1, [Score=107, Expect=7e-26]} |
8. | MligTC455_15087 | 28 | 0.59 | Mlig455_036738 | Neo: - Age: - |
0.968 | - | - | - | - | - | 0.968 | Mlig455_036738 {REF} {Length: 821} {RNA1509_18025} {RNA1310_92583} {RNA815_44681} | |
9. | MligTC455_18195 | 44 | 0.91 | Mlig455_062091 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_062091 {REF} {Length: 1470} {NoTransDecoderORF} {RNA1310_21905} | |
10. | MligTC455_27025 | 706 | 14.7 | Mlig455_054786, Mlig455_054878 | Neo: - Age: - Region-enriched R2: 3.519/0.00005 |
CD82 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_054786 {REF} {Length: 2796} {Pfam: Tetraspanin family [PF00335.22, score=142.8]} {Human: ENSG00000085117, CD82, CD82 molecule, [RH, Score=86.3, Expect=4e-19]} {Mouse: ENSMUSG00000027215, Cd82, CD82 antigen, [RH, Score=94.0, Expect=3e-22]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=98.6, Expect=6e-24]} {Celegans: WBGene00006632, tsp-6, Tetraspanin, [Score=74.7, Expect=1e-15]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [RH, Score=160, Expect=2e-47]} {RNA1509_20389, RNA1509_43644, RNA1509_56428} {RNA1310_8032.1, RNA1509_20389, RNA1509_43644, RNA1509_56428} {RNA1509_20389, RNA1509_43644, RNA1509_56428, RNA815_3380.1} Mlig455_054878 {REF} {Length: 4398} {Pfam: Tetraspanin family [PF00335.22, score=143.7]} {Human: ENSG00000085117, CD82, CD82 molecule, [RH, Score=84.7, Expect=2e-18]} {Mouse: ENSMUSG00000027215, Cd82, CD82 antigen, [RH, Score=92.4, Expect=2e-21]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=99.8, Expect=4e-24]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [RH, Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [RH, Score=160, Expect=2e-47]} {RNA1509_56428} {RNA1310_8032.2} {RNA815_3380.1} |
11. | MligTC455_34727 | 96 | 2 | Mlig455_041259 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.811 Region-enriched R8: 4.340/0.01025 |
GLIPR1 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_041259 {REF} {Length: 5028} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=67.4]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=98.6, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [RH, Score=107, Expect=7e-26]} {Dmel: FBgn0038126, CG8483, [Score=52.8, Expect=5e-07]} {Celegans: WBGene00003055, lon-1, LONg, [Score=67.0, Expect=6e-12]} {Smed: dd_Smed_v6_681_0_1, dd_Smed_v6_681_0_1, [Score=104, Expect=1e-25]} {RNA1509_36146} {RNA1310_23199} {RNA815_7031} |
12. | MligTC455_29153 | 62 | 1.28 | Mlig455_018743, Mlig455_018911 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_018743 {REF} {Length: 1064} {RNA1509_38365} {RNA1310_117516} {RNA815_19813} Mlig455_018911 {REF} {Length: 2829} {RNA1509_38365} {RNA1310_117516} {RNA815_28950} |
|
13. | MligTC455_56556 | 25 | 0.53 | Mlig455_036704 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_036704 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_37140} {RNA1310_19242.2} {RNA815_32458} | |
14. | MligTC455_43227 | 81 | 1.7 | Mlig455_040808, Mlig455_040907 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_040808 {REF} {Length: 3396} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.5]} {RNA1310_94548} {RNA815_41738} Mlig455_040907 {REF} {Length: 3148} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.0]} {RNA1310_56531.1} {RNA815_41738} |
|
15. | MligTC455_01799 | 70 | 1.46 | Mlig455_038552 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_038552 {REF} {Length: 658} {NoTransDecoderORF} {RNA1509_6341} {RNA1310_13441.1} {RNA815_5624} | |
16. | MligTC455_42139 | 59 | 1.22 | Mlig455_036296, Mlig455_036309 | Neo: - Age: Down-Up-Down |
GEM | 0.961 | - | - | - | - | - | 0.961 | Mlig455_036296 {REF} {Length: 2798} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=77.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=28.3]; RsgA GTPase [PF03193.18, score=20.6]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; ADP-ribosylation factor family [PF00025.23, score=19.3]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=92.4, Expect=3e-20]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=88.6, Expect=5e-19]; ENSMUSG00000031880, Rrad, Ras-related associated with diabetes, [Score=87.4, Expect=2e-18]} {Dmel: FBgn0264753, Rgk1, Rad, Gem/Kir family member 1, [Score=131, Expect=6e-32]} {Celegans: WBGene00004268, rab-5, RAB family, [Score=68.6, Expect=5e-13]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=139, Expect=3e-36]} {RNA1310_58676} {RNA815_42986} Mlig455_036309 {REF} {Length: 524} {NoTransDecoderORF} {RNA1310_92999} {RNA815_63620} |
17. | MligTC455_46952 | 43 | 0.9 | Mlig455_031219 | Neo: - Age: - Region-enriched R4: 5.444/0.03746 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_031219 {REF} {Length: 735} | |
18. | MligTC455_47821 | 43 | 0.89 | Mlig455_029144 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_029144 {REF} {Length: 1245} {NoTransDecoderORF} {RNA1509_36286} {RNA1310_76886} {RNA815_44450} | |
19. | MligTC455_11913 | 18 | 0.37 | Mlig455_034418, Mlig455_034461 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_034418 {REF} {Length: 1771} {RNA1310_104880} {RNA815_60750} Mlig455_034461 {REF} {Length: 175} {NoTransDecoderORF} |
|
20. | MligTC455_24205 | 31 | 0.65 | Mlig455_024806, Mlig455_024883 | Neo: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_024806 {REF} {Length: 3383} {RNA1509_710} {RNA1310_16.1} {RNA815_8} Mlig455_024883 {REF} {Length: 16745} {RNA1509_27819, RNA1509_710} {RNA1310_16.1, RNA1509_27819} {RNA1509_27819, RNA815_8} |
|
21. | MligTC455_39821 | 45 | 0.94 | Mlig455_020248 | Neo: - Age: - |
DRGX | 0.96 | - | - | - | - | - | 0.960 | Mlig455_020248 {REF} {Length: 1773} {Pfam: Homeodomain [PF00046.31, score=83.1]} {Human: ENSG00000165606, DRGX, dorsal root ganglia homeobox, [RH, Score=132, Expect=4e-35]} {Mouse: ENSMUSG00000041730, Prrxl1, paired related homeobox protein-like 1, [RH, Score=133, Expect=1e-35]} {Dmel: FBgn0085369, Drgx, Dorsal root ganglia homeobox, [RH, Score=152, Expect=3e-40]} {Celegans: WBGene00000440, ceh-17, C. Elegans Homeobox; CEH-17, [Score=112, Expect=3e-28]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [RH, Score=159, Expect=2e-47]} {RNA1310_82891} |
22. | MligTC455_27412 | 37 | 0.76 | Mlig455_061429 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_061429 {REF} {Length: 529} {RNA1509_35898} {RNA1310_110646} {RNA815_3780.8} | |
23. | MligTC455_44937 | 112 | 2.33 | Mlig455_058569 | Neo: - Age: Down-Up-Down |
0.959 | - | - | - | - | - | 0.959 | Mlig455_058569 {REF} {Length: 1225} {Dmel: FBgn0034289, CG10910, [Score=95.9, Expect=4e-22]} {RNA1509_30568} {RNA1310_70061} {RNA815_48492} | |
24. | MligTC455_06648 | 83 | 1.73 | Mlig455_010424 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_010424 {REF} {Length: 1011} | |
25. | MligTC455_07838 | 46 | 0.96 | Mlig455_050475 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_050475 {REF} {Length: 598} {NoTransDecoderORF} | |
26. | MligTC455_10155 | 25 | 0.53 | Mlig455_036600 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_036600 {REF} {Length: 1976} {NoTransDecoderORF} {RNA1509_13138} {RNA1310_14959.1} {RNA815_9852.1} | |
27. | MligTC455_46234 | 18 | 0.38 | Mlig455_036321 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_036321 {REF} {Length: 2256} {Pfam: Glycine rich protein family [PF07172.13, score=21.7]} {RNA1310_96230} | |
28. | MligTC455_19847 | 287 | 5.99 | Mlig455_018312 | Neo: - Age: Down-Up-Down |
0.957 | - | - | - | - | - | 0.957 | Mlig455_018312 {REF} {Length: 1351} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF14719.8, score=27.9]; Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=27.7]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.9]} {Dmel: FBgn0035431, CG14968, [Score=75.9, Expect=4e-16]} {Smed: dd_Smed_v6_16269_0_1, dd_Smed_v6_16269_0_1, [Score=46.6, Expect=6e-06]} {RNA1509_28129} {RNA1310_26006} {RNA815_14793} | |
29. | MligTC455_22689 | 26 | 0.54 | Mlig455_050479 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_050479 {REF} {Length: 4332} {RNA1310_123601} {RNA815_61258} | |
30. | MligTC455_32633 | 189 | 3.93 | Mlig455_001739, Mlig455_001759, Mlig455_039278 | Neo: - Age: - Region-enriched R2: 4.593/0.00022 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_001739 {REF} {Length: 1990} {Pfam: CD20-like family [PF04103.17, score=41.0]} {Mouse: ENSMUSG00000048004, Tmem196, transmembrane protein 196, [RH, Score=63.9, Expect=1e-12]} {Smed: dd_Smed_v6_14043_0_1, dd_Smed_v6_14043_0_1, [RH, Score=184, Expect=8e-59]} {RNA1310_42061} {RNA815_17286} Mlig455_001759 {REF} {Length: 3995} {Mouse: ENSMUSG00000048004, Tmem196, transmembrane protein 196, [Score=47.8, Expect=1e-06]} {Smed: dd_Smed_v6_14043_0_1, dd_Smed_v6_14043_0_1, [Score=150, Expect=6e-46]} {RNA1509_41966} {RNA1310_20375} {RNA815_17286} Mlig455_039278 {REF} {Length: 1821} {Smed: dd_Smed_v6_14043_0_1, dd_Smed_v6_14043_0_1, [Score=122, Expect=1e-34]} {RNA1310_42061} {RNA815_17286} |
|
31. | MligTC455_44025 | 591 | 12.31 | Mlig455_050980 | Neo: - Age: - Region-specific R2: 5.366 Region-enriched R2: 5.986/0.00000 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_050980 {REF} {Length: 587} {Smed: dd_Smed_v6_2575_0_1, dd_Smed_v6_2575_0_1, [Score=49.7, Expect=7e-09]} {RNA1509_52032} {RNA1310_52449.2} {RNA815_56904} | |
32. | MligTC455_47975 | 31 | 0.64 | Mlig455_018682, Mlig455_043427 | Neo: - Age: Up-Down-Down |
ISL1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_018682 {REF} {Length: 3387} {Pfam: LIM domain [PF00412.24, score=95.5]; Homeodomain [PF00046.31, score=55.3]; Homeobox KN domain [PF05920.13, score=23.7]} {Human: ENSG00000016082, ISL1, ISL LIM homeobox 1, [Score=202, Expect=6e-60]} {Mouse: ENSMUSG00000042258, Isl1, ISL1 transcription factor, LIM/homeodomain, [Score=202, Expect=4e-60]} {Dmel: FBgn0003896, tup, tailup, [RH, Score=178, Expect=3e-49]} {Celegans: WBGene00002989, lim-7, CeLIM-7; LIM domain family, [RH, Score=228, Expect=5e-69]} {Smed: dd_Smed_v6_8820_0_1, dd_Smed_v6_8820_0_1, [Score=320, Expect=1e-103]} {RNA1310_20628} {RNA815_37694} Mlig455_043427 {REF} {Length: 3365} {Pfam: LIM domain [PF00412.24, score=77.4]; Homeodomain [PF00046.31, score=53.3]; Homeobox KN domain [PF05920.13, score=21.8]} {Human: ENSG00000016082, ISL1, ISL LIM homeobox 1, [Score=167, Expect=2e-46]} {Mouse: ENSMUSG00000042258, Isl1, ISL1 transcription factor, LIM/homeodomain, [Score=167, Expect=1e-46]; ENSMUSG00000032318, Isl2, insulin related protein 2 (islet 2), [Score=160, Expect=4e-44]} {Dmel: FBgn0003896, tup, tailup, [Score=144, Expect=1e-37]} {Celegans: WBGene00002989, lim-7, CeLIM-7; LIM domain family, [Score=204, Expect=6e-60]} {Smed: dd_Smed_v6_8820_0_1, dd_Smed_v6_8820_0_1, [Score=274, Expect=7e-86]} {RNA1310_20628} {RNA815_37694} |
33. | MligTC455_23752 | 138 | 2.87 | Mlig455_056854 | Neo: - Age: Up-Down-Down |
GRIK3 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_056854 {REF} {Length: 4616} {Pfam: Ligand-gated ion channel [PF00060.28, score=110.6]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=92.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=86.6]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=222, Expect=9e-60]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=219, Expect=6e-59]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=218, Expect=9e-59]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=217, Expect=4e-58]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=215, Expect=2e-57]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=214, Expect=3e-57]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=212, Expect=3e-56]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=212, Expect=4e-56]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=211, Expect=6e-56]; ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=211, Expect=6e-56]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=223, Expect=5e-60]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=220, Expect=4e-59]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=217, Expect=2e-58]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=216, Expect=6e-58]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=216, Expect=6e-58]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=214, Expect=4e-57]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=214, Expect=5e-57]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [RH, Score=294, Expect=8e-85]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [RH, Score=320, Expect=6e-95]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [RH, Score=658, Expect=0.0]} {RNA1509_25374} {RNA1310_4098, RNA1509_25374} {RNA1509_25374, RNA815_19029} |
34. | MligTC455_07053 | 23 | 0.47 | Mlig455_013671 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_013671 {REF} {Length: 343} {RNA1509_19561} {RNA1310_8953} {RNA815_356.1} | |
35. | MligTC455_34540 | 221 | 4.6 | Mlig455_016865, Mlig455_070027 | Neo: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_016865 {REF} {Length: 1474} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=32.5]} {Smed: dd_Smed_v6_2230_0_3, dd_Smed_v6_2230_0_3, [Score=58.2, Expect=1e-09]} {RNA1509_3951} {RNA1310_52427} {RNA815_9492.2} Mlig455_070027 {REF} {Length: 1697} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=32.5]} {Smed: dd_Smed_v6_2230_0_3, dd_Smed_v6_2230_0_3, [Score=58.2, Expect=1e-09]} {RNA1310_52427} |
|
36. | MligTC455_50288 | 118 | 2.47 | Mlig455_059182 | Neo: - Age: Up-Down-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_059182 {REF} {Length: 3438} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=42.6]; Lectin C-type domain [PF00059.23, score=23.6]} {Smed: dd_Smed_v6_41498_0_1, dd_Smed_v6_41498_0_1, [RH, Score=189, Expect=3e-53]} {RNA1509_45950, RNA1509_54781} {RNA1310_10757.1, RNA1509_45950, RNA1509_54781} {RNA1509_45950, RNA1509_54781, RNA815_5369} | |
37. | MligTC455_54271 | 87 | 1.82 | Mlig455_067612 | Neo: - Age: - |
UNCX | 0.955 | - | - | - | - | - | 0.955 | Mlig455_067612 {REF} {Length: 2927} {Pfam: Homeodomain [PF00046.31, score=81.2]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=171, Expect=1e-47]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=171, Expect=5e-48]} {Dmel: FBgn0024184, unc-4, [RH, Score=167, Expect=4e-46]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=147, Expect=1e-41]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=174, Expect=2e-50]} {RNA1509_31519} {RNA1310_108854} {RNA815_4812} |
38. | MligTC455_08896 | 38 | 0.78 | Mlig455_048380 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_048380 {REF} {Length: 341} {TRANSSPLICED} {RNA1310_46010} {RNA815_47858} | |
39. | MligTC455_35529 | 117 | 2.43 | Mlig455_020107, Mlig455_069888 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_020107 {REF} {Length: 3566} {RNA1509_53783} {RNA1310_29335.1} {RNA815_9084.1} Mlig455_069888 {REF} {Length: 2216} {RNA1509_44264} {RNA1310_56703} {RNA815_9084.1} |
|
40. | MligTC455_37351 | 33 | 0.68 | Mlig455_061197 | Neo: - Age: - Regeneration-upregulated R2: 6.835 Regeneration-enriched R2: 6.835 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_061197 {REF} {Length: 2072} {Pfam: RNase H [PF00075.26, score=59.1]} {RNA1509_53488} {RNA1310_40766} | |
41. | MligTC455_49020 | 172 | 3.58 | Mlig455_035624, Mlig455_048255, Mlig455_048315 | Neo: - Age: logFC(26M/2M)=-0.385 Region-enriched R2: 3.728/0.03083 |
SLC26A5 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_035624 {REF} {Length: 4558} {Pfam: Sulfate permease family [PF00916.22, score=254.9]; STAS domain [PF01740.23, score=82.3]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=364, Expect=1e-117]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=360, Expect=3e-116]} {Dmel: FBgn0036770, Prestin, [Score=281, Expect=7e-86]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=274, Expect=4e-85]} {Smed: dd_Smed_v6_4250_0_4, dd_Smed_v6_4250_0_4, [Score=468, Expect=9e-158]} {RNA1509_27065} {RNA1310_5442.2} {RNA815_6518} Mlig455_048255 {REF} {Length: 5310} {Pfam: Sulfate permease family [PF00916.22, score=382.6]; STAS domain [PF01740.23, score=81.1]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [RH, Score=464, Expect=4e-151]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [RH, Score=465, Expect=7e-152]} {Dmel: FBgn0036770, Prestin, [RH, Score=371, Expect=6e-116]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [RH, Score=375, Expect=4e-119]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [RH, Score=633, Expect=0.0]} {RNA1509_27065} {RNA1310_5442.2} {RNA815_6518} Mlig455_048315 {REF} {Length: 4387} {Pfam: Sulfate permease family [PF00916.22, score=260.9]; STAS domain [PF01740.23, score=82.2]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=360, Expect=2e-114]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=359, Expect=2e-114]} {Dmel: FBgn0036770, Prestin, [Score=248, Expect=1e-72]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=285, Expect=3e-86]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=477, Expect=5e-160]} {RNA1509_27065} {RNA1310_5442.2} {RNA815_6518} |
42. | MligTC455_49434 | 157 | 3.26 | Mlig455_068252, Mlig455_068272 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_068252 {REF} {Length: 718} {Smed: dd_Smed_v6_17523_0_1, dd_Smed_v6_17523_0_1, [Score=63.5, Expect=1e-12]} {RNA1310_75052} Mlig455_068272 {REF} {Length: 1055} {Smed: dd_Smed_v6_17523_0_1, dd_Smed_v6_17523_0_1, [Score=63.2, Expect=2e-12]} {RNA1310_75052} |
|
43. | MligTC455_50045 | 52 | 1.09 | Mlig455_054573 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_054573 {REF} {Length: 2684} {NoTransDecoderORF} {RNA1509_48232} {RNA1310_60087} {RNA815_14770.1} | |
44. | MligTC455_51311 | 17 | 0.36 | Mlig455_003546 | Neo: - Age: Up-Down-Down |
TRPC4 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_003546 {REF} {Length: 3667} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=175, Expect=1e-48]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=173, Expect=3e-48]; ENSMUSG00000041710, Trpc5, transient receptor potential cation channel, subfamily C, member 5, [Score=166, Expect=7e-46]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=210, Expect=2e-61]} {Celegans: WBGene00006615, trp-2, TRP (Transient receptor potential) channel family; TRP homlogous cation channel protein, [Score=131, Expect=5e-34]} {Smed: dd_Smed_v6_15627_0_2, dd_Smed_v6_15627_0_2, [Score=251, Expect=1e-79]} {RNA1509_39535} {RNA1310_51104} {RNA815_28901} |
45. | MligTC455_52586 | 230 | 4.78 | Mlig455_069158 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_069158 {REF} {Length: 3154} {RNA1509_45748, RNA1509_55217} {RNA1310_4688.1, RNA1509_45748} {RNA1509_45748, RNA815_38425} | |
46. | MligTC455_53099 | 42 | 0.87 | Mlig455_058469 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_058469 {REF} {Length: 728} {RNA1509_35494} {RNA1310_20742.1} {RNA815_15801} | |
47. | MligTC455_22291 | 51 | 1.07 | Mlig455_065235 | Neo: - Age: - Regeneration-upregulated R2: 5.455 Regeneration-enriched R2: 5.455 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_065235 {REF} {Length: 2964} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=64.2]} {RNA1509_18097} {RNA1310_12300.1} {RNA815_11171.1} | |
48. | MligTC455_03214 | 9 | 0.18 | Mlig455_010777 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_010777 {REF} {Length: 2486} {NoTransDecoderORF} {RNA1509_18025} {RNA1310_52802} {RNA815_44681} | |
49. | MligTC455_00072 | 10 | 0.2 | Mlig455_001911 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_001911 {REF} {Length: 296} {NoTransDecoderORF} {RNA1310_118235} | |
50. | MligTC455_10251 | 25 | 0.51 | Mlig455_002552 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_002552 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_11657} {RNA1310_5276.1} {RNA815_27122} | |
51. | MligTC455_27203 | 178 | 3.7 | Mlig455_056778 | Neo: - Age: - Region-enriched R5: 2.470/0.02695 |
ACTG1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_056778 {REF} {Length: 10764} {Pfam: Actin [PF00022.21, score=469.5]; RIH domain [PF01365.23, score=52.7]; Integrase core domain [PF00665.28, score=48.1]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=37.6]; MIR domain [PF02815.21, score=36.4]; RyR and IP3R Homology associated [PF08454.13, score=29.4]; Ion transport protein [PF00520.33, score=19.1]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [Score=710, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [Score=708, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [Score=681, Expect=0.0]} {Mouse: ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [Score=710, Expect=0.0]; ENSMUSG00000029580, Actb, actin, beta, [Score=708, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [Score=689, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [Score=689, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [Score=689, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [Score=688, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [Score=687, Expect=0.0]} {Dmel: FBgn0000044, Act57B, Actin 57B, [Score=708, Expect=0.0]} {Celegans: WBGene00000065, act-3, Actin-1, [Score=711, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [Score=702, Expect=0.0]} {RNA1509_59019} {RNA1310_34487} {RNA815_14388} |
52. | MligTC455_40376 | 46 | 0.95 | Mlig455_019751, Mlig455_019761 | Neo: - Age: - |
HDAC4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_019751 {REF} {Length: 2920} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=283.9]} {Human: ENSG00000068024, HDAC4, histone deacetylase 4, [RH, Score=420, Expect=2e-130]; ENSG00000061273, HDAC7, histone deacetylase 7, [RH, Score=407, Expect=6e-127]; ENSG00000048052, HDAC9, histone deacetylase 9, [RH, Score=405, Expect=3e-125]} {Mouse: ENSMUSG00000026313, Hdac4, histone deacetylase 4, [RH, Score=416, Expect=5e-129]; ENSMUSG00000022475, Hdac7, histone deacetylase 7, [RH, Score=414, Expect=2e-130]; ENSMUSG00000004698, Hdac9, histone deacetylase 9, [RH, Score=398, Expect=5e-123]; ENSMUSG00000008855, Hdac5, histone deacetylase 5, [RH, Score=397, Expect=6e-122]} {Dmel: FBgn0041210, HDAC4, Histone deacetylase 4, [RH, Score=395, Expect=5e-120]} {Celegans: WBGene00001837, hda-4, Histone deacetylase 4, [RH, Score=387, Expect=1e-120]} {Smed: dd_Smed_v6_9385_0_1, dd_Smed_v6_9385_0_1, [Score=436, Expect=2e-139]} {RNA1509_17700} {RNA1310_5730.1} {RNA815_4623} Mlig455_019761 {REF} {Length: 3317} {Pfam: Histone deacetylase domain [PF00850.21, score=281.0]} {Human: ENSG00000068024, HDAC4, histone deacetylase 4, [RH, Score=423, Expect=3e-131]; ENSG00000061273, HDAC7, histone deacetylase 7, [RH, Score=409, Expect=4e-127]; ENSG00000048052, HDAC9, histone deacetylase 9, [RH, Score=407, Expect=9e-126]} {Mouse: ENSMUSG00000026313, Hdac4, histone deacetylase 4, [RH, Score=419, Expect=1e-129]; ENSMUSG00000022475, Hdac7, histone deacetylase 7, [RH, Score=416, Expect=2e-130]; ENSMUSG00000004698, Hdac9, histone deacetylase 9, [RH, Score=402, Expect=2e-123]; ENSMUSG00000008855, Hdac5, histone deacetylase 5, [RH, Score=399, Expect=6e-122]} {Dmel: FBgn0041210, HDAC4, Histone deacetylase 4, [RH, Score=397, Expect=2e-120]} {Celegans: WBGene00001837, hda-4, Histone deacetylase 4, [RH, Score=387, Expect=3e-120]} {Smed: dd_Smed_v6_9385_0_1, dd_Smed_v6_9385_0_1, [Score=436, Expect=2e-139]} {RNA1509_17700} {RNA1310_5730.1} {RNA815_4623} |