TomoSeq data search

Data search

Results for MligTC455_40144

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40144	4072	84.84	Mlig455_046259	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.608	MRTO4	Mlig455_046259 {REF} {Length: 1293} {TRANSSPLICED} {Pfam: Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=63.0]; Ribosomal protein L10 [PF00466.22, score=60.6]} {Human: ENSG00000053372, MRTO4, MRT4 homolog, ribosome maturation factor, [RH, Score=195, Expect=3e-61]} {Mouse: ENSMUSG00000028741, Mrto4, mRNA turnover 4, ribosome maturation factor, [RH, Score=196, Expect=1e-61]} {Dmel: FBgn0033485, RpLP0-like, Ribosomal protein LP0-like, [RH, Score=172, Expect=2e-52]} {Celegans: WBGene00017347, F10E7.5, Ribosome assembly factor mrt4, [RH, Score=141, Expect=6e-41]} {Smed: dd_Smed_v6_1609_0_1, dd_Smed_v6_1609_0_1, [RH, Score=119, Expect=2e-32]} {RNA1509_1783, RNA1509_49632} {RNA1310_26004.1, RNA1509_1783, RNA1509_49632} {RNA1509_1783, RNA1509_49632, RNA815_11188}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40144

4072

84.84

Mlig455_046259

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.608

MRTO4

Mlig455_046259 {REF} {Length: 1293} {TRANSSPLICED} {Pfam: Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=63.0]; Ribosomal protein L10 [PF00466.22, score=60.6]} {Human: ENSG00000053372, MRTO4, MRT4 homolog, ribosome maturation factor, [RH, Score=195, Expect=3e-61]} {Mouse: ENSMUSG00000028741, Mrto4, mRNA turnover 4, ribosome maturation factor, [RH, Score=196, Expect=1e-61]} {Dmel: FBgn0033485, RpLP0-like, Ribosomal protein LP0-like, [RH, Score=172, Expect=2e-52]} {Celegans: WBGene00017347, F10E7.5, Ribosome assembly factor mrt4, [RH, Score=141, Expect=6e-41]} {Smed: dd_Smed_v6_1609_0_1, dd_Smed_v6_1609_0_1, [RH, Score=119, Expect=2e-32]} {RNA1509_1783, RNA1509_49632} {RNA1310_26004.1, RNA1509_1783, RNA1509_49632} {RNA1509_1783, RNA1509_49632, RNA815_11188}

Cumulative graph for MligTC455_40144

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.518	6.573	0.38170	1.00000
RegionR2	0.233	6.573	0.54394	0.91079
RegionR3	0.12	6.573	0.71315	1.00000
RegionR4	-0.36	6.573	0.32994	0.64810
RegionR5	-0.474	6.573	0.13432	0.37425
RegionR6	-0.054	6.573	0.86626	1.00000
RegionR7	0.682	6.573	0.02640	0.30593
RegionR8	0.372	6.573	0.29936	0.92963

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.301	6.573	0.70239	1.00000
RegenerationR2	-0.417	6.573	0.29546	0.73783
RegenerationR3	-0.431	6.573	0.29801	0.72943
RegenerationR4	-0.328	6.573	0.44165	0.83823
RegenerationR5	-0.06	6.573	0.88464	1.00000
RegenerationR6	-0.062	6.573	0.88146	1.00000
RegenerationBL	-1.19	6.573	0.00402	0.05680
RegenerationTP	-0.797	6.573	0.06418	0.40986

Genes with expression patterns similar to MligTC455_40144

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40144	4072	84.84	Mlig455_046259	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.608	MRTO4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046259 {REF} {Length: 1293} {TRANSSPLICED} {Pfam: Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=63.0]; Ribosomal protein L10 [PF00466.22, score=60.6]} {Human: ENSG00000053372, MRTO4, MRT4 homolog, ribosome maturation factor, [RH, Score=195, Expect=3e-61]} {Mouse: ENSMUSG00000028741, Mrto4, mRNA turnover 4, ribosome maturation factor, [RH, Score=196, Expect=1e-61]} {Dmel: FBgn0033485, RpLP0-like, Ribosomal protein LP0-like, [RH, Score=172, Expect=2e-52]} {Celegans: WBGene00017347, F10E7.5, Ribosome assembly factor mrt4, [RH, Score=141, Expect=6e-41]} {Smed: dd_Smed_v6_1609_0_1, dd_Smed_v6_1609_0_1, [RH, Score=119, Expect=2e-32]} {RNA1509_1783, RNA1509_49632} {RNA1310_26004.1, RNA1509_1783, RNA1509_49632} {RNA1509_1783, RNA1509_49632, RNA815_11188}
2.	MligTC455_40146	3049	63.53	Mlig455_061567	Neo: - Age: -		5.812	0.971	0.983	0.907	0.980	0.992	0.979	Mlig455_061567 {REF} {Length: 1051} {NoTransDecoderORF} {RNA1509_57137} {RNA1310_26004.1} {RNA815_11188}
3.	MligTC455_40145	3067	63.89	Mlig455_061566	Neo: - Age: Down-Down-Up	MRTO4	5.806	0.971	0.981	0.907	0.980	0.992	0.975	Mlig455_061566 {REF} {Length: 1281} {TRANSSPLICED} {Pfam: Insertion domain in 60S ribosomal protein L10P [PF17777.3, score=63.1]; Ribosomal protein L10 [PF00466.22, score=60.6]} {Human: ENSG00000053372, MRTO4, MRT4 homolog, ribosome maturation factor, [RH, Score=195, Expect=2e-61]} {Mouse: ENSMUSG00000028741, Mrto4, mRNA turnover 4, ribosome maturation factor, [RH, Score=196, Expect=1e-61]} {Dmel: FBgn0033485, RpLP0-like, Ribosomal protein LP0-like, [RH, Score=172, Expect=2e-52]} {Celegans: WBGene00017347, F10E7.5, Ribosome assembly factor mrt4, [RH, Score=141, Expect=5e-41]} {Smed: dd_Smed_v6_1609_0_1, dd_Smed_v6_1609_0_1, [RH, Score=120, Expect=1e-32]} {RNA1509_11115} {RNA1310_26004.1, RNA1509_11115} {RNA1509_11115, RNA815_11188}
4.	MligTC455_39735	601	12.52	Mlig455_014637	Neo: - Age: Down-Up-Down Region-enriched R2: 1.439/0.03156		0.957	-	-	0.957	-	-	-	Mlig455_014637 {REF} {Length: 3559} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=61.8]; von Willebrand factor type A domain [PF13768.8, score=20.3]} {Smed: dd_Smed_v6_10837_0_1, dd_Smed_v6_10837_0_1, [RH, Score=94.7, Expect=1e-19]} {RNA1509_28750, RNA1509_45023} {RNA1310_4730, RNA1509_28750, RNA1509_45023} {RNA1509_28750, RNA1509_45023, RNA815_8808}