Data search
Results for MligTC455_40180
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40180 | 82 | 1.71 | Mlig455_015503 | Neo: - Age: Down-Up-Down |
SRFBP1 | Mlig455_015503 {REF} {Length: 2303} {TRANSSPLICED} {Pfam: BUD22 [PF09073.12, score=35.1]} {Human: ENSG00000151304, SRFBP1, serum response factor binding protein 1, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_9477_0_1, dd_Smed_v6_9477_0_1, [Score=46.6, Expect=1e-05]} {RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157} {RNA1310_17756, RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157} {RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157, RNA815_1312.1} |
Cumulative graph for MligTC455_40180
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.818 | 1.874 | 0.04816 | 0.52200 | |
| RegionR2 | 2.386 | 1.874 | 0.11518 | 0.41982 | |
| RegionR3 | 1.912 | 1.874 | 0.04310 | 0.36272 | |
| RegionR4 | -1.593 | 1.874 | 0.99809 | 1.00000 | |
| RegionR5 | 1.112 | 1.874 | 0.26964 | 0.59398 | |
| RegionR6 | 1.844 | 1.874 | 0.07116 | 0.49700 | |
| RegionR7 | 0.396 | 1.874 | 0.74955 | 1.00000 | |
| RegionR8 | 1.761 | 1.874 | 0.32347 | 0.95679 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.613 | 1.874 | 0.99968 | 1.00000 | |
| RegenerationR2 | 2.063 | 1.874 | 0.04729 | 0.35884 | |
| RegenerationR3 | 2.276 | 1.874 | 0.01106 | 0.19180 | |
| RegenerationR4 | 2.138 | 1.874 | 0.03644 | 0.30782 | |
| RegenerationR5 | 0.735 | 1.874 | 0.30731 | 0.73413 | |
| RegenerationR6 | 2.757 | 1.874 | 0.00201 | 0.05104 | |
| RegenerationBL | 1.294 | 1.874 | 0.44231 | 0.80932 | |
| RegenerationTP | -2.005 | 1.874 | 0.39506 | 0.82594 |
Genes with expression patterns similar to MligTC455_40180
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40180 | 82 | 1.71 | Mlig455_015503 | Neo: - Age: Down-Up-Down |
SRFBP1 | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_015503 {REF} {Length: 2303} {TRANSSPLICED} {Pfam: BUD22 [PF09073.12, score=35.1]} {Human: ENSG00000151304, SRFBP1, serum response factor binding protein 1, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_9477_0_1, dd_Smed_v6_9477_0_1, [Score=46.6, Expect=1e-05]} {RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157} {RNA1310_17756, RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157} {RNA1509_30240, RNA1509_41150, RNA1509_51332, RNA1509_52126, RNA1509_58220, RNA1509_60157, RNA815_1312.1} |
| 2. | MligTC455_23815 | 152 | 3.16 | Mlig455_002411, Mlig455_015380 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_002411 {REF} {Length: 1686} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_17835} {RNA815_29786} Mlig455_015380 {REF} {Length: 1667} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_19291} {RNA815_29786} |
|
| 3. | MligTC455_16091 | 79 | 1.64 | Mlig455_019123 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_019123 {REF} {Length: 2742} {NoTransDecoderORF} {RNA1509_27707} {RNA1310_133938} | |
| 4. | MligTC455_36107 | 41 | 0.86 | Mlig455_024610 | Neo: - Age: Down-Up-Up |
LRRC32 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_024610 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=50.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=50.2]; IQ calmodulin-binding motif [PF00612.29, score=44.3]} {Human: ENSG00000137507, LRRC32, leucine rich repeat containing 32, [Score=61.6, Expect=1e-08]; ENSG00000182504, CEP97, centrosomal protein 97, [Score=60.5, Expect=3e-08]; ENSG00000177595, PIDD1, p53-induced death domain protein 1, [Score=59.7, Expect=5e-08]} {Mouse: ENSMUSG00000056215, Lrguk, leucine-rich repeats and guanylate kinase domain containing, [Score=61.6, Expect=8e-09]; ENSMUSG00000047766, Lrrc49, leucine rich repeat containing 49, [Score=59.7, Expect=2e-08]; ENSMUSG00000025507, Pidd1, p53 induced death domain protein 1, [Score=59.7, Expect=3e-08]} {Dmel: FBgn0033250, CG14762, [Score=54.7, Expect=5e-07]} {Smed: dd_Smed_v6_12813_0_1, dd_Smed_v6_12813_0_1, [RH, Score=78.6, Expect=3e-14]} {RNA1509_9054} {RNA1310_5331.1, RNA1509_9054} {RNA1509_9054, RNA815_12796} |
Berezikov Lab - 2020-2021 © ERIBA