Data search
Results for MligTC455_40288
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40288 | 571 | 11.90 | Mlig455_005844 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.473 Region-enriched R5: 1.371/0.00237 |
GATB | Mlig455_005844 {REF} {Length: 1785} {TRANSSPLICED} {Pfam: GatB/GatE catalytic domain [PF02934.17, score=306.7]} {Human: ENSG00000059691, GATB, glutamyl-tRNA amidotransferase subunit B, [RH, Score=332, Expect=3e-107]} {Mouse: ENSMUSG00000028085, Gatb, glutamyl-tRNA(Gln) amidotransferase, subunit B, [RH, Score=334, Expect=4e-108]} {Dmel: FBgn0039153, GatB, Glutamyl-tRNA amidotransferase, subunit B, [RH, Score=341, Expect=2e-111]} {Celegans: WBGene00016524, C39B5.6, Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial, [RH, Score=267, Expect=3e-83]} {Smed: dd_Smed_v6_10478_0_1, dd_Smed_v6_10478_0_1, [RH, Score=332, Expect=5e-108]} {RNA1509_14510} {RNA1310_16804, RNA1509_14510} {RNA1509_14510, RNA815_23167} |
Cumulative graph for MligTC455_40288
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.074 | 3.943 | 0.94988 | 1.00000 | |
| RegionR2 | -0.456 | 3.943 | 0.42028 | 0.81199 | |
| RegionR3 | 0.161 | 3.943 | 0.71456 | 1.00000 | |
| RegionR4 | 0.493 | 3.943 | 0.31409 | 0.62967 | |
| RegionR5 | 1.371 | 3.943 | 0.00016 | 0.00237 | |
| RegionR6 | -0.257 | 3.943 | 0.58926 | 1.00000 | |
| RegionR7 | -0.775 | 3.943 | 0.25920 | 0.88639 | |
| RegionR8 | -0.613 | 3.943 | 0.47057 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.028 | 3.943 | 0.43677 | 1.00000 | |
| RegenerationR2 | 0.983 | 3.943 | 0.02949 | 0.28223 | |
| RegenerationR3 | 0.517 | 3.943 | 0.28329 | 0.71499 | |
| RegenerationR4 | 0.61 | 3.943 | 0.20970 | 0.65741 | |
| RegenerationR5 | -0.081 | 3.943 | 0.84611 | 1.00000 | |
| RegenerationR6 | 0.829 | 3.943 | 0.10640 | 0.40427 | |
| RegenerationBL | 0.557 | 3.943 | 0.38875 | 0.75705 | |
| RegenerationTP | -0.053 | 3.943 | 0.94799 | 1.00000 |
Genes with expression patterns similar to MligTC455_40288
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40288 | 571 | 11.9 | Mlig455_005844 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.473 Region-enriched R5: 1.371/0.00237 |
GATB | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005844 {REF} {Length: 1785} {TRANSSPLICED} {Pfam: GatB/GatE catalytic domain [PF02934.17, score=306.7]} {Human: ENSG00000059691, GATB, glutamyl-tRNA amidotransferase subunit B, [RH, Score=332, Expect=3e-107]} {Mouse: ENSMUSG00000028085, Gatb, glutamyl-tRNA(Gln) amidotransferase, subunit B, [RH, Score=334, Expect=4e-108]} {Dmel: FBgn0039153, GatB, Glutamyl-tRNA amidotransferase, subunit B, [RH, Score=341, Expect=2e-111]} {Celegans: WBGene00016524, C39B5.6, Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial, [RH, Score=267, Expect=3e-83]} {Smed: dd_Smed_v6_10478_0_1, dd_Smed_v6_10478_0_1, [RH, Score=332, Expect=5e-108]} {RNA1509_14510} {RNA1310_16804, RNA1509_14510} {RNA1509_14510, RNA815_23167} |
| 2. | MligTC455_27555 | 571 | 11.89 | Mlig455_045152 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.234 Region-enriched R5: 1.064/0.00881 |
MPHOSPH8 | 2.504 | 0.954 | - | - | 0.744 | - | 0.806 | Mlig455_045152 {REF} {Length: 2584} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=43.2]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=38.9]; Ankyrin repeat [PF13606.8, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=27.3]; Ankyrin repeats (many copies) [PF13637.8, score=26.3]; Ankyrin repeat [PF00023.32, score=23.7]} {Human: ENSG00000196199, MPHOSPH8, M-phase phosphoprotein 8, [Score=59.3, Expect=2e-08]} {Mouse: ENSMUSG00000079184, Mphosph8, M-phase phosphoprotein 8, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_10984_0_1, dd_Smed_v6_10984_0_1, [Score=55.5, Expect=9e-08]} {RNA1509_11349} {RNA1310_8020, RNA1509_11349} {RNA1509_11349, RNA815_18069} |
| 3. | MligTC455_15874 | 479 | 9.99 | Mlig455_032227 | Neo: Int S/G2/M |
HNRNPA2B1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_032227 {REF} {Length: 2235} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=115.4]; RNA recognition motif [PF16367.7, score=47.7]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=3e-54]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=182, Expect=5e-54]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [Score=178, Expect=3e-52]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=7e-52]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=184, Expect=5e-55]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=182, Expect=1e-53]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [Score=181, Expect=5e-53]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=3e-52]} {Dmel: FBgn0001215, Hrb98DE, Heterogeneous nuclear ribonucleoprotein at 98DE, [Score=178, Expect=3e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=3e-53]} {Smed: dd_Smed_v6_1194_0_2, dd_Smed_v6_1194_0_2, [Score=189, Expect=2e-57]} {RNA1509_21479} {RNA1310_19571, RNA1509_21479} {RNA1509_21479, RNA815_15616} |
| 4. | MligTC455_42083 | 1795 | 37.39 | Mlig455_037821 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.235 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_037821 {REF} {Length: 4217} {Pfam: DNA polymerase phi [PF04931.15, score=80.9]} {RNA1509_3413, RNA1509_39819} {RNA1310_2049.2, RNA1509_3413, RNA1509_39819} {RNA1509_3413, RNA1509_39819, RNA815_568.1} | |
| 5. | MligTC455_52750 | 371 | 7.73 | Mlig455_039691 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_039691 {REF} {Length: 1600} {TRANSSPLICED} {RNA1509_34696} {RNA1310_20294.1} {RNA815_8918.1} | |
| 6. | MligTC455_52825 | 458 | 9.53 | Mlig455_061311 | Neo: - Age: - |
USE1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_061311 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Membrane fusion protein Use1 [PF09753.11, score=152.4]} {Human: ENSG00000053501, USE1, unconventional SNARE in the ER 1, [RH, Score=83.6, Expect=6e-18]} {Mouse: ENSMUSG00000002395, Use1, unconventional SNARE in the ER 1 homolog (S. cerevisiae), [RH, Score=78.6, Expect=4e-16]} {Dmel: FBgn0035965, Use1, Unconventional SNARE in the ER 1, [RH, Score=77.8, Expect=3e-16]} {RNA1509_10490} {RNA1310_27716.1} {RNA815_34426} |
| 7. | MligTC455_15566 | 1057 | 22.03 | Mlig455_004932, Mlig455_019726 | Neo: - Age: - |
TOP2B | 0.953 | - | - | - | - | - | 0.953 | Mlig455_004932 {REF} {Length: 4310} {TRANSSPLICED} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=330.3]; C-terminal associated domain of TOPRIM [PF16898.7, score=70.3]; DNA gyrase B [PF00204.27, score=54.0]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=45.7]} {Human: ENSG00000077097, TOP2B, DNA topoisomerase II beta, [Score=874, Expect=0.0]; ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [Score=872, Expect=0.0]} {Mouse: ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [Score=878, Expect=0.0]; ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [Score=876, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [Score=890, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [Score=796, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_3, dd_Smed_v6_1626_0_3, [Score=856, Expect=0.0]} {RNA1509_50365, RNA1509_8869} {RNA1310_2021, RNA1509_50365} {RNA1509_50365, RNA815_838} Mlig455_019726 {REF} {Length: 4322} {TRANSSPLICED} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=330.3]; C-terminal associated domain of TOPRIM [PF16898.7, score=70.3]; DNA gyrase B [PF00204.27, score=54.0]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=44.4]} {Human: ENSG00000077097, TOP2B, DNA topoisomerase II beta, [Score=872, Expect=0.0]; ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [Score=870, Expect=0.0]} {Mouse: ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [Score=875, Expect=0.0]; ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [Score=874, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [Score=889, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [Score=793, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_3, dd_Smed_v6_1626_0_3, [Score=853, Expect=0.0]} {RNA1509_8869} {RNA1310_2021, RNA1509_8869} {RNA1509_8869, RNA815_838} |
| 8. | MligTC455_52751 | 363 | 7.56 | Mlig455_039748 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | - | 0.952 | Mlig455_039748 {REF} {Length: 1589} {TRANSSPLICED} {RNA1509_34696} {RNA1310_20294.1} {RNA815_8918.1} | |
| 9. | MligTC455_15825 | 424 | 8.84 | Mlig455_037341 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | - | - | 0.950 | Mlig455_037341 {REF} {Length: 3883} {Smed: dd_Smed_v6_11002_0_1, dd_Smed_v6_11002_0_1, [RH, Score=61.2, Expect=8e-10]} {RNA1509_18042, RNA1509_37280} {RNA1310_7557, RNA1509_37280} {RNA1509_37280, RNA815_16831} |
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