Data search


search
Exact
Search

Results for MligTC455_40291

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40291 1118 23.30 Mlig455_014374

Neo: -

Age: logFC(26M/2M)=0.242

SLC3A1 Mlig455_014374 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Solute carrier family 3 member 2 N-terminus [PF16028.7, score=86.8]; Alpha amylase, catalytic domain [PF00128.26, score=41.9]} {Human: ENSG00000138079, SLC3A1, solute carrier family 3 member 1, [Score=90.1, Expect=5e-18]} {Mouse: ENSMUSG00000010095, Slc3a2, solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2, [RH, Score=86.7, Expect=3e-17]} {Dmel: FBgn0037533, CD98hc, CD98 heavy chain, [RH, Score=73.2, Expect=3e-13]} {Celegans: WBGene00000224, atgp-1, Amino acid Transporter GlycoProtein subunit, [Score=122, Expect=7e-29]} {Smed: dd_Smed_v6_2113_0_1, dd_Smed_v6_2113_0_1, [Score=137, Expect=4e-34]} {RNA1509_6786} {RNA1310_9653, RNA1509_6786} {RNA1509_6786, RNA815_3457}

Cumulative graph for MligTC455_40291

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.519 4.798 0.51098 1.00000
RegionR2 0.721 4.798 0.01945 0.15043
RegionR3 -0.246 4.798 0.34091 0.87773
RegionR4 -0.494 4.798 0.12296 0.35227
RegionR5 0.273 4.798 0.22356 0.52655
RegionR6 -0.082 4.798 0.75325 1.00000
RegionR7 0.719 4.798 0.01384 0.20972
RegionR8 -0.373 4.798 0.37328 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.287 4.798 0.05133 0.70238
RegenerationR2 -0.728 4.798 0.00325 0.08738
RegenerationR3 -0.304 4.798 0.30680 0.73752
RegenerationR4 -0.154 4.798 0.62095 0.92100
RegenerationR5 -0.563 4.798 0.03381 0.30599
RegenerationR6 -0.203 4.798 0.50816 0.81190
RegenerationBL -0.414 4.798 0.28580 0.64763
RegenerationTP -0.971 4.798 0.02000 0.24267


Genes with expression patterns similar to MligTC455_40291

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40291 1118 23.3 Mlig455_014374

Neo: -

Age: logFC(26M/2M)=0.242

SLC3A1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014374 {REF} {Length: 3188} {TRANSSPLICED} {Pfam: Solute carrier family 3 member 2 N-terminus [PF16028.7, score=86.8]; Alpha amylase, catalytic domain [PF00128.26, score=41.9]} {Human: ENSG00000138079, SLC3A1, solute carrier family 3 member 1, [Score=90.1, Expect=5e-18]} {Mouse: ENSMUSG00000010095, Slc3a2, solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2, [RH, Score=86.7, Expect=3e-17]} {Dmel: FBgn0037533, CD98hc, CD98 heavy chain, [RH, Score=73.2, Expect=3e-13]} {Celegans: WBGene00000224, atgp-1, Amino acid Transporter GlycoProtein subunit, [Score=122, Expect=7e-29]} {Smed: dd_Smed_v6_2113_0_1, dd_Smed_v6_2113_0_1, [Score=137, Expect=4e-34]} {RNA1509_6786} {RNA1310_9653, RNA1509_6786} {RNA1509_6786, RNA815_3457}
2. MligTC455_50289 4516 94.08 Mlig455_012884

Neo: -

Age: logFC(26M/2M)=0.583

1.749 - - - - 0.960 0.789 Mlig455_012884 {REF} {Length: 2998} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=40.6]; PH domain [PF00169.31, score=30.5]} {RNA1509_10008, RNA1509_16021, RNA1509_38080, RNA1509_4364, RNA1509_51284, RNA1509_51557, RNA1509_53856} {RNA1310_5865, RNA1509_10008, RNA1509_16021, RNA1509_38080, RNA1509_4364, RNA1509_51284, RNA1509_51557, RNA1509_53856} {RNA1509_10008, RNA1509_16021, RNA1509_38080, RNA1509_4364, RNA1509_51284, RNA1509_51557, RNA1509_53856, RNA815_2457.1}
3. MligTC455_17371 402 8.37 Mlig455_057595

Neo: -

Age: Up-Down-Up

FRMPD2 1.728 - - - 0.766 - 0.962 Mlig455_057595 {REF} {Length: 6274} {Pfam: PDZ domain [PF00595.26, score=116.9]; PDZ domain [PF17820.3, score=53.9]; FERM central domain [PF00373.20, score=34.0]; PDZ domain [PF13180.8, score=29.8]; FERM C-terminal PH-like domain [PF09380.12, score=20.6]} {Human: ENSG00000170324, FRMPD2, FERM and PDZ domain containing 2, [Score=94.0, Expect=2e-18]; ENSG00000163629, PTPN13, protein tyrosine phosphatase, non-receptor type 13, [Score=93.6, Expect=4e-18]} {Mouse: ENSMUSG00000034573, Ptpn13, protein tyrosine phosphatase, non-receptor type 13, [Score=94.4, Expect=1e-18]} {Dmel: FBgn0004583, ex, expanded, [Score=65.9, Expect=4e-10]} {Celegans: WBGene00001492, frm-5.1, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=77.4, Expect=1e-13]} {Smed: dd_Smed_v6_3493_1_1, dd_Smed_v6_3493_1_1, [Score=75.9, Expect=7e-14]} {RNA1509_18922, RNA1509_42494} {RNA1310_439, RNA1509_42494} {RNA1509_42494, RNA815_23639}
4. MligTC455_40827 572 11.91 Mlig455_044485

Neo: Irradiation

Age: Up-Down-Down

1.7 - - 0.731 - 0.969 - Mlig455_044485 {REF} {Length: 2920} {RNA1509_20181, RNA1509_30928, RNA1509_59911} {RNA1310_18910, RNA1509_20181, RNA1509_30928, RNA1509_59911} {RNA1509_20181, RNA1509_30928, RNA1509_59911, RNA815_13640}
5. MligTC455_28093 350 7.3 Mlig455_049818

Neo: -

Age: -

ZNF208 1.687 - - - 0.724 - 0.963 Mlig455_049818 {REF} {Length: 5159} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=24.2} {Pfam: Zinc-finger double domain [PF13465.8, score=455.4]; Zinc finger, C2H2 type [PF00096.28, score=334.6]; C2H2-type zinc finger [PF13894.8, score=244.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=137.9]; Zinc-finger of C2H2 type [PF12874.9, score=118.0]; C2H2-type zinc finger [PF13912.8, score=35.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=26.4]; C2H2-type zinc-finger domain [PF13909.8, score=21.0]} {Human: ENSG00000160321, ZNF208, zinc finger protein 208, [Score=544, Expect=1e-172]; ENSG00000167232, ZNF91, zinc finger protein 91, [Score=529, Expect=5e-168]} {Mouse: ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=488, Expect=5e-155]} {Dmel: FBgn0020309, crol, crooked legs, [Score=255, Expect=9e-71]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=177, Expect=4e-46]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=147, Expect=2e-35]} {RNA1509_11635} {RNA1310_6381} {RNA815_979}
6. MligTC455_30833 369 7.69 Mlig455_009101

Neo: -

Age: logFC(26M/2M)=-0.366

HDAC11 0.978 - - - - - 0.978 Mlig455_009101 {REF} {Length: 2072} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=164.2]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [RH, Score=413, Expect=3e-144]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [RH, Score=410, Expect=2e-143]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [RH, Score=327, Expect=5e-111]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [RH, Score=293, Expect=5e-98]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [RH, Score=318, Expect=8e-108]} {RNA1509_25531, RNA1509_59332, RNA1509_60160} {RNA1310_11718, RNA1509_25531, RNA1509_59332, RNA1509_60160} {RNA1509_25531, RNA1509_59332, RNA1509_60160, RNA815_3768.1}
7. MligTC455_32683 1152 24 Mlig455_004047, Mlig455_004099

Neo: -

Age: -

0.972 - - - 0.972 - -

Mlig455_004047 {REF} {Length: 6986} {RNA1509_15507} {RNA1310_5851} {RNA815_7211.1}

Mlig455_004099 {REF} {Length: 7549} {RNA1509_15507} {RNA1310_5851, RNA1509_15507} {RNA1509_15507, RNA815_7211.1}
8. MligTC455_48747 832 17.33 Mlig455_001553, Mlig455_046546

Neo: -

Age: Down-Up-Up

ANGPTL1 0.967 - - - - 0.967 -

Mlig455_001553 {REF} {Length: 1838} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=102.6]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=92.0, Expect=1e-19]; ENSG00000085265, FCN1, ficolin 1, [Score=90.1, Expect=1e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=88.6, Expect=1e-18]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=93.2, Expect=2e-20]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=89.4, Expect=1e-19]} {Dmel: FBgn0051832, CG31832, [Score=84.7, Expect=9e-19]} {Celegans: WBGene00020516, T15B7.1, [Score=49.3, Expect=2e-06]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=70.5, Expect=4e-13]} {RNA1509_34926} {RNA1310_22594} {RNA815_9322}

Mlig455_046546 {REF} {Length: 1830} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=102.6]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=92.0, Expect=1e-19]; ENSG00000085265, FCN1, ficolin 1, [Score=90.1, Expect=1e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=88.6, Expect=1e-18]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=93.2, Expect=2e-20]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=89.4, Expect=1e-19]} {Dmel: FBgn0051832, CG31832, [Score=84.7, Expect=9e-19]} {Celegans: WBGene00020516, T15B7.1, [Score=49.3, Expect=3e-06]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=70.9, Expect=3e-13]} {RNA1509_34926} {RNA1310_22594, RNA1509_34926} {RNA1509_34926, RNA815_9322}
9. MligTC455_51967 1450 30.2 Mlig455_040569, Mlig455_040651

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.494/0.02392
Region-enriched R5: 1.460/0.00120

EIF4EBP2 0.958 - - - - 0.958 -

Mlig455_040569 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) [PF05456.13, score=122.7]} {Human: ENSG00000148730, EIF4EBP2, eukaryotic translation initiation factor 4E binding protein 2, [Score=103, Expect=1e-28]} {Mouse: ENSMUSG00000020091, Eif4ebp2, eukaryotic translation initiation factor 4E binding protein 2, [RH, Score=103, Expect=5e-29]} {Dmel: FBgn0261560, Thor, [RH, Score=71.2, Expect=2e-16]} {Smed: dd_Smed_v6_1204_0_1, dd_Smed_v6_1204_0_1, [Score=79.7, Expect=3e-20]} {RNA1509_30403, RNA1509_33547, RNA1509_51376} {RNA1310_53423, RNA1509_30403, RNA1509_33547, RNA1509_51376} {RNA1509_30403, RNA1509_33547, RNA1509_51376, RNA815_26362}

Mlig455_040651 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Eukaryotic translation initiation factor 4E binding protein (EIF4EBP) [PF05456.13, score=121.5]} {Human: ENSG00000148730, EIF4EBP2, eukaryotic translation initiation factor 4E binding protein 2, [Score=103, Expect=1e-28]} {Mouse: ENSMUSG00000020091, Eif4ebp2, eukaryotic translation initiation factor 4E binding protein 2, [RH, Score=103, Expect=6e-29]} {Dmel: FBgn0261560, Thor, [RH, Score=71.2, Expect=2e-16]} {Smed: dd_Smed_v6_1204_0_1, dd_Smed_v6_1204_0_1, [Score=79.7, Expect=4e-20]} {RNA1509_24307, RNA1509_30403, RNA1509_30422} {RNA1310_53423, RNA1509_24307, RNA1509_30422} {RNA1509_24307, RNA1509_30422, RNA815_26362}
10. MligTC455_27378 318 6.63 Mlig455_040603, Mlig455_056832

Neo: -

Age: Up-Down-Down

0.951 - - - 0.951 - -

Mlig455_040603 {REF} {Length: 634} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12332} {RNA1310_47792} {RNA815_31459}

Mlig455_056832 {REF} {Length: 1382} {TRANSSPLICED} {RNA1509_12332} {RNA1310_24611} {RNA815_31459}
11. MligTC455_32386 304 6.34 Mlig455_017912

Neo: -

Age: -

0.951 - - - - - 0.951 Mlig455_017912 {REF} {Length: 3388} {TRANSSPLICED} {Pfam: Autophagy receptor zinc finger-C2H2 domain [PF18112.3, score=22.3]} {RNA1509_19044} {RNA1310_16904.1} {RNA815_20048}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA