Data search
Results for MligTC455_40347
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40347 | 2650 | 55.21 | Mlig455_000133 | Neo: - Age: Up-Down-Up |
GRAMD4 | Mlig455_000133 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: GRAM domain [PF02893.22, score=38.3]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=25.2]; Integral peroxisomal membrane peroxin [PF06398.13, score=21.3]; Protein of unknown function (DUF3292) [PF11696.10, score=19.9]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=229, Expect=5e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=231, Expect=3e-66]} {Celegans: WBGene00022313, Y77E11A.12, [RH, Score=88.6, Expect=5e-18]} {RNA1509_29936, RNA1509_9280} {RNA1310_7444.2, RNA1509_29936, RNA1509_9280} {RNA1509_29936, RNA1509_9280, RNA815_7265} |
Cumulative graph for MligTC455_40347
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.077 | 5.927 | 0.04115 | 0.49185 | |
| RegionR2 | -0.367 | 5.927 | 0.30456 | 0.69531 | |
| RegionR3 | 0.215 | 5.927 | 0.45720 | 0.96759 | |
| RegionR4 | 0.737 | 5.927 | 0.02159 | 0.10778 | |
| RegionR5 | -0.561 | 5.927 | 0.04901 | 0.18488 | |
| RegionR6 | -0.317 | 5.927 | 0.29393 | 0.88568 | |
| RegionR7 | -0.155 | 5.927 | 0.66182 | 1.00000 | |
| RegionR8 | -0.63 | 5.927 | 0.16970 | 0.74291 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.391 | 5.927 | 0.05851 | 0.72416 | |
| RegenerationR2 | 0.396 | 5.927 | 0.25827 | 0.70477 | |
| RegenerationR3 | -0.126 | 5.927 | 0.72348 | 0.95564 | |
| RegenerationR4 | -0.618 | 5.927 | 0.09258 | 0.47475 | |
| RegenerationR5 | 0.066 | 5.927 | 0.85255 | 1.00000 | |
| RegenerationR6 | 0.474 | 5.927 | 0.19142 | 0.52986 | |
| RegenerationBL | -0.691 | 5.927 | 0.09550 | 0.36281 | |
| RegenerationTP | -0.225 | 5.927 | 0.60054 | 0.96119 |
Genes with expression patterns similar to MligTC455_40347
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40347 | 2650 | 55.21 | Mlig455_000133 | Neo: - Age: Up-Down-Up |
GRAMD4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_000133 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: GRAM domain [PF02893.22, score=38.3]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=25.2]; Integral peroxisomal membrane peroxin [PF06398.13, score=21.3]; Protein of unknown function (DUF3292) [PF11696.10, score=19.9]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=229, Expect=5e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=231, Expect=3e-66]} {Celegans: WBGene00022313, Y77E11A.12, [RH, Score=88.6, Expect=5e-18]} {RNA1509_29936, RNA1509_9280} {RNA1310_7444.2, RNA1509_29936, RNA1509_9280} {RNA1509_29936, RNA1509_9280, RNA815_7265} |
| 2. | MligTC455_53156 | 310 | 6.46 | Mlig455_071165 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.163/0.02696 |
LRRC59 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_071165 {REF} {Length: 1903} {Pfam: Leucine rich repeat [PF13855.8, score=65.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=28.7]; Leucine Rich Repeat [PF00560.35, score=26.4]} {Human: ENSG00000108829, LRRC59, leucine rich repeat containing 59, [RH, Score=188, Expect=2e-57]} {Mouse: ENSMUSG00000020869, Lrrc59, leucine rich repeat containing 59, [RH, Score=191, Expect=1e-58]} {Dmel: FBgn0036008, CG3408, [RH, Score=108, Expect=3e-27]} {Celegans: WBGene00010139, F56A8.3, [RH, Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_2987_0_1, dd_Smed_v6_2987_0_1, [RH, Score=113, Expect=4e-29]} {RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254} {RNA1310_21864.2, RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254} {RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254, RNA815_26895} |
| 3. | MligTC455_31545 | 232 | 4.83 | Mlig455_041002 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.739/0.02271 |
OGFR | 0.963 | - | - | - | 0.963 | - | - | Mlig455_041002 {REF} {Length: 2334} {TRANSSPLICED} {Pfam: Opioid growth factor receptor (OGFr) conserved region [PF04664.15, score=196.5]} {Human: ENSG00000060491, OGFR, opioid growth factor receptor, [RH, Score=161, Expect=4e-47]; ENSG00000119900, OGFRL1, opioid growth factor receptor like 1, [RH, Score=157, Expect=3e-45]} {Mouse: ENSMUSG00000049401, Ogfr, opioid growth factor receptor, [RH, Score=171, Expect=4e-49]} {Smed: dd_Smed_v6_6170_0_2, dd_Smed_v6_6170_0_2, [RH, Score=139, Expect=3e-41]} {RNA1509_55857} {RNA1310_4693} {RNA815_18822} |
| 4. | MligTC455_27824 | 2030 | 42.29 | Mlig455_003122 | Neo: Germline Age: logFC(26M/2M)=0.254 Region-enriched R5: 1.424/0.00006 |
HSPA8 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_003122 {REF} {Length: 2862} {Pfam: Hsp70 protein [PF00012.22, score=870.1]; MreB/Mbl protein [PF06723.15, score=62.2]; Cell division protein FtsA [PF14450.8, score=20.7]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=19.0]} {Human: ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [RH, Score=1144, Expect=0.0]} {Mouse: ENSMUSG00000015656, Hspa8, heat shock protein 8, [RH, Score=1144, Expect=0.0]; ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [RH, Score=1090, Expect=0.0]} {Dmel: FBgn0266599, Hsc70-4, Heat shock protein cognate 4, [RH, Score=1095, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [RH, Score=1077, Expect=0.0]} {Smed: dd_Smed_v6_15_0_1, dd_Smed_v6_15_0_1, [RH, Score=1159, Expect=0.0]} {RNA1509_29431, RNA1509_7634, RNA1509_857} {RNA1310_22589, RNA1509_7634, RNA1509_857} {RNA1509_7634, RNA1509_857, RNA815_2255} |
| 5. | MligTC455_41159 | 112 | 2.33 | Mlig455_014878 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_014878 {REF} {Length: 1646} {RNA1509_5537} {RNA1310_2775} {RNA815_5708} | |
| 6. | MligTC455_46435 | 1130 | 23.55 | Mlig455_054966 | Neo: - Age: - |
ACADL | 0.952 | - | - | - | 0.952 | - | - | Mlig455_054966 {REF} {Length: 1760} {TRANSSPLICED} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=142.1]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=102.3]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=81.2]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=50.5]} {Human: ENSG00000115361, ACADL, acyl-CoA dehydrogenase long chain, [Score=237, Expect=4e-73]} {Mouse: ENSMUSG00000026003, Acadl, acyl-Coenzyme A dehydrogenase, long-chain, [Score=247, Expect=4e-77]} {Dmel: FBgn0037999, CG4860, [Score=200, Expect=2e-59]} {Celegans: WBGene00015335, acdh-6, Probable acyl-CoA dehydrogenase 6, [RH, Score=429, Expect=6e-149]} {Smed: dd_Smed_v6_3160_0_1, dd_Smed_v6_3160_0_1, [RH, Score=492, Expect=1e-173]} {RNA1509_41674, RNA1509_6736} {RNA1310_17274.1, RNA1509_41674, RNA1509_6736} {RNA1509_41674, RNA1509_6736, RNA815_6539.1} |
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