TomoSeq data search

Data search

Results for MligTC455_40362

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40362	1244	25.93	Mlig455_062074	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.311	UVSSA	Mlig455_062074 {REF} {Length: 2186} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=84.8]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=196, Expect=3e-53]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=207, Expect=3e-57]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=70.1, Expect=3e-12]} {RNA1509_3435} {RNA1310_11538, RNA1509_3435} {RNA1509_3435, RNA815_9312}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40362

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.761	4.884	0.18683	0.81892
RegionR2	0.896	4.884	0.06764	0.31599
RegionR3	-0.041	4.884	0.92518	1.00000
RegionR4	0.322	4.884	0.48989	0.81703
RegionR5	0.518	4.884	0.15402	0.41032
RegionR6	0.093	4.884	0.82082	1.00000
RegionR7	0.508	4.884	0.30417	0.93906
RegionR8	-0.534	4.884	0.47314	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.398	4.884	0.01259	0.48006
RegenerationR2	0.162	4.884	0.67697	0.94783
RegenerationR3	0.766	4.884	0.08671	0.47833
RegenerationR4	0.345	4.884	0.44479	0.83933
RegenerationR5	-0.091	4.884	0.82106	0.99464
RegenerationR6	0.149	4.884	0.73737	0.94582
RegenerationBL	-0.355	4.884	0.52951	0.88948
RegenerationTP	0.157	4.884	0.78699	1.00000

Genes with expression patterns similar to MligTC455_40362

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40362	1244	25.93	Mlig455_062074	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.311	UVSSA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062074 {REF} {Length: 2186} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=84.8]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=196, Expect=3e-53]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=207, Expect=3e-57]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=70.1, Expect=3e-12]} {RNA1509_3435} {RNA1310_11538, RNA1509_3435} {RNA1509_3435, RNA815_9312}
2.	MligTC455_40361	3350	69.8	Mlig455_008301, Mlig455_040565, Mlig455_040647	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.780	UVSSA	4.85	0.984	0.977	0.994	-	0.935	0.960	Mlig455_008301 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312} Mlig455_040565 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312} Mlig455_040647 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312}
3.	MligTC455_33315	1137	23.68	Mlig455_012321	Neo: - Age: -	TM9SF2	0.961	-	-	-	0.961	-	-	Mlig455_012321 {REF} {Length: 3271} {Pfam: Endomembrane protein 70 [PF02990.18, score=637.7]; Citrate transporter [PF03600.18, score=18.9]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=793, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=788, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [Score=786, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [Score=723, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=452, Expect=2e-151]} {RNA1509_50610, RNA1509_5677} {RNA1310_8008, RNA1509_50610, RNA1509_5677} {RNA1509_50610, RNA1509_5677, RNA815_3036}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40362

1244

25.93

Mlig455_062074

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.311

UVSSA

1.000

MligTC455_40361

3350

69.8

Mlig455_008301, Mlig455_040565, Mlig455_040647

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.780

UVSSA

4.85

0.984

0.977

0.994

0.935

0.960

Mlig455_008301 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312}

Mlig455_040565 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312}

Mlig455_040647 {REF} {Length: 2176} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2043) [PF09740.11, score=87.5]} {Human: ENSG00000163945, UVSSA, UV stimulated scaffold protein A, [RH, Score=200, Expect=2e-54]} {Mouse: ENSMUSG00000037355, Uvssa, UV stimulated scaffold protein A, [RH, Score=200, Expect=1e-54]} {Celegans: WBGene00022812, uvs-1, UV-stimulated scaffold protein A homolog, [RH, Score=68.6, Expect=9e-12]} {RNA1509_3435} {RNA1310_11538} {RNA815_9312}

MligTC455_33315

1137

23.68

Mlig455_012321

Neo: -

Age: -

TM9SF2

0.961

Mlig455_012321 {REF} {Length: 3271} {Pfam: Endomembrane protein 70 [PF02990.18, score=637.7]; Citrate transporter [PF03600.18, score=18.9]} {Human: ENSG00000125304, TM9SF2, transmembrane 9 superfamily member 2, [Score=793, Expect=0.0]} {Mouse: ENSMUSG00000025544, Tm9sf2, transmembrane 9 superfamily member 2, [Score=788, Expect=0.0]} {Dmel: FBgn0032880, TM9SF2, Transmembrane 9 superfamily protein member 2, [Score=786, Expect=0.0]} {Celegans: WBGene00006472, tag-123, Transmembrane 9 superfamily member, [Score=723, Expect=0.0]} {Smed: dd_Smed_v6_2806_0_1, dd_Smed_v6_2806_0_1, [Score=452, Expect=2e-151]} {RNA1509_50610, RNA1509_5677} {RNA1310_8008, RNA1509_50610, RNA1509_5677} {RNA1509_50610, RNA1509_5677, RNA815_3036}