Data search
Results for MligTC455_40394
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40394 | 303 | 6.31 | Mlig455_070227 | Neo: - Age: - Region-enriched R2: 2.563/0.03433 |
TCF7L2 | Mlig455_070227 {REF} {Length: 1894} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=66.0]; HMG-box domain [PF09011.12, score=35.4]} {Human: ENSG00000148737, TCF7L2, transcription factor 7 like 2, [Score=149, Expect=9e-40]; ENSG00000081059, TCF7, transcription factor 7, [Score=148, Expect=7e-40]} {Mouse: ENSMUSG00000024985, Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box, [Score=145, Expect=2e-38]} {Dmel: FBgn0085432, pan, pangolin, [Score=139, Expect=5e-36]} {Celegans: WBGene00004077, pop-1, [RH, Score=92.0, Expect=2e-20]} {Smed: dd_Smed_v6_8152_0_1, dd_Smed_v6_8152_0_1, [RH, Score=147, Expect=3e-39]} {RNA1509_34060, RNA1509_39765} {RNA1310_5266.1, RNA1509_34060, RNA1509_39765} {RNA1509_34060, RNA1509_39765, RNA815_5301.1} |
Cumulative graph for MligTC455_40394
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.337 | 3.206 | 0.11072 | 0.69208 | |
| RegionR2 | 2.563 | 3.206 | 0.00195 | 0.03433 | |
| RegionR3 | 0.701 | 3.206 | 0.46333 | 0.97216 | |
| RegionR4 | 0.169 | 3.206 | 0.78120 | 1.00000 | |
| RegionR5 | 1.683 | 3.206 | 0.01397 | 0.07411 | |
| RegionR6 | -0.532 | 3.206 | 0.96008 | 1.00000 | |
| RegionR7 | 1.925 | 3.206 | 0.03996 | 0.38197 | |
| RegionR8 | -0.172 | 3.206 | 0.91129 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.161 | 3.206 | 0.19852 | 0.93925 | |
| RegenerationR2 | -0.288 | 3.206 | 0.54296 | 0.88968 | |
| RegenerationR3 | 1.174 | 3.206 | 0.05247 | 0.39573 | |
| RegenerationR4 | 0.926 | 3.206 | 0.10429 | 0.49809 | |
| RegenerationR5 | 0.721 | 3.206 | 0.12719 | 0.53148 | |
| RegenerationR6 | 2.313 | 3.206 | 0.00069 | 0.02818 | |
| RegenerationBL | 0.398 | 3.206 | 0.64571 | 0.98343 | |
| RegenerationTP | 0.92 | 3.206 | 0.29915 | 0.74449 |
Genes with expression patterns similar to MligTC455_40394
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40394 | 303 | 6.31 | Mlig455_070227 | Neo: - Age: - Region-enriched R2: 2.563/0.03433 |
TCF7L2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_070227 {REF} {Length: 1894} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=66.0]; HMG-box domain [PF09011.12, score=35.4]} {Human: ENSG00000148737, TCF7L2, transcription factor 7 like 2, [Score=149, Expect=9e-40]; ENSG00000081059, TCF7, transcription factor 7, [Score=148, Expect=7e-40]} {Mouse: ENSMUSG00000024985, Tcf7l2, transcription factor 7 like 2, T cell specific, HMG box, [Score=145, Expect=2e-38]} {Dmel: FBgn0085432, pan, pangolin, [Score=139, Expect=5e-36]} {Celegans: WBGene00004077, pop-1, [RH, Score=92.0, Expect=2e-20]} {Smed: dd_Smed_v6_8152_0_1, dd_Smed_v6_8152_0_1, [RH, Score=147, Expect=3e-39]} {RNA1509_34060, RNA1509_39765} {RNA1310_5266.1, RNA1509_34060, RNA1509_39765} {RNA1509_34060, RNA1509_39765, RNA815_5301.1} |
| 2. | MligTC455_39285 | 503 | 10.48 | Mlig455_026954 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.273/0.00002 |
1.703 | - | 0.749 | - | - | - | 0.954 | Mlig455_026954 {REF} {Length: 2234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25432} {RNA1310_22232} {RNA815_10193} | |
| 3. | MligTC455_44615 | 349 | 7.28 | Mlig455_013647 | Neo: - Age: - Region-enriched R5: 1.203/0.00879 |
ERG28 | 1.68 | - | 0.723 | - | - | - | 0.957 | Mlig455_013647 {REF} {Length: 2311} {TRANSSPLICED} {Pfam: Erg28 like protein [PF03694.15, score=81.5]} {Human: ENSG00000133935, ERG28, ergosterol biosynthesis 28 homolog, [RH, Score=78.6, Expect=1e-18]} {Mouse: ENSMUSG00000021252, Erg28, ergosterol biosynthesis 28, [RH, Score=77.8, Expect=2e-18]} {RNA1509_32376} {RNA1310_30496, RNA1509_32376} {RNA1509_32376, RNA815_19683} |
| 4. | MligTC455_33626 | 159 | 3.32 | Mlig455_027968 | Neo: - Age: - |
0.979 | - | - | - | - | - | 0.979 | Mlig455_027968 {REF} {Length: 4332} {Pfam: Transducer of regulated CREB activity, N terminus [PF12884.9, score=29.6]} {RNA1509_26956} {RNA1310_8476, RNA1509_26956} {RNA1509_26956, RNA815_20817} | |
| 5. | MligTC455_36598 | 227 | 4.73 | Mlig455_018327 | Neo: - Age: logFC(26M/2M)=0.418 Region-enriched R5: 2.284/0.01974 |
EIF3A | 0.973 | - | - | - | - | - | 0.973 | Mlig455_018327 {REF} {Length: 1445} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=29.7]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [Score=503, Expect=7e-163]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [Score=503, Expect=3e-163]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [Score=437, Expect=3e-140]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [Score=356, Expect=4e-110]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [Score=500, Expect=1e-166]} {RNA1509_25111} {RNA1310_2722} {RNA815_884} |
| 6. | MligTC455_24403 | 293 | 6.11 | Mlig455_002756 | Neo: Irradiation Age: - |
ATAD2B | 0.963 | - | - | - | - | - | 0.963 | Mlig455_002756 {REF} {Length: 5381} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.5]; Bromodomain [PF00439.27, score=48.1]; AAA+ lid domain [PF17862.3, score=36.2]; AAA domain (Cdc48 subfamily) [PF07724.16, score=22.9]; AAA ATPase domain [PF13191.8, score=22.0]} {Human: ENSG00000119778, ATAD2B, ATPase family, AAA domain containing 2B, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000052812, Atad2b, ATPase family, AAA domain containing 2B, [RH, Score=668, Expect=0.0]; ENSMUSG00000116053, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]; ENSMUSG00000022360, Atad2, ATPase family, AAA domain containing 2, [RH, Score=652, Expect=0.0]} {Dmel: FBgn0261014, TER94, [Score=230, Expect=2e-62]} {Celegans: WBGene00008682, lex-1, Tat-binding homolog 7, [RH, Score=513, Expect=5e-160]} {Smed: dd_Smed_v6_8534_0_1, dd_Smed_v6_8534_0_1, [RH, Score=522, Expect=1e-164]} {RNA1509_47976} {RNA1310_2482.1} {RNA815_17171} |
| 7. | MligTC455_43438 | 932 | 19.41 | Mlig455_006893, Mlig455_017898, Mlig455_017907 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.407 Region-enriched R5: 1.337/0.01327 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_006893 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.5, Expect=1e-13]} {RNA1509_30732, RNA1509_46681, RNA1509_50375} {RNA1310_43918.1, RNA1509_30732, RNA1509_46681, RNA1509_50375} {RNA1509_30732, RNA1509_46681, RNA1509_50375, RNA815_36663} Mlig455_017898 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.1, Expect=1e-13]} {RNA1509_32774} {RNA1310_43918.1} {RNA815_36663} Mlig455_017907 {REF} {Length: 940} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.1, Expect=1e-13]} {RNA1509_32774} {RNA1310_43918.1, RNA1509_32774} {RNA1509_32774, RNA815_36663} |
|
| 8. | MligTC455_17179 | 1116 | 23.26 | Mlig455_036839, Mlig455_052978, Mlig455_053039 | Neo: Int S/G2/M Age: - |
HNRNPUL1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_036839 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=44.1]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=79.3, Expect=4e-14]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=82.0, Expect=4e-15]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=56.2, Expect=2e-07]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=79.3, Expect=1e-14]} {RNA1509_5187} {RNA1310_10031, RNA1509_5187} {RNA1509_5187, RNA815_657.1} Mlig455_052978 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=41.0]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=78.2, Expect=5e-14]} {Celegans: WBGene00012769, hrpu-1, Heterogeneous nuclear RibonucleoProtein U, [Score=53.9, Expect=1e-06]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=75.9, Expect=1e-13]} {RNA1509_5187} {RNA1310_10031} {RNA815_657.1} Mlig455_053039 {REF} {Length: 4638} {TRANSSPLICED} {Pfam: AAA domain [PF13671.8, score=38.1]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=76.6, Expect=2e-13]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_1485_0_1, dd_Smed_v6_1485_0_1, [Score=75.1, Expect=3e-13]} {RNA1509_5187} {RNA1310_10031} {RNA815_657.1} |
| 9. | MligTC455_44238 | 804 | 16.74 | Mlig455_000138 | Neo: - Age: logFC(26M/2M)=-0.408 |
DDX58 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_000138 {REF} {Length: 3489} {TRANSSPLICED} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=62.5]; Helicase conserved C-terminal domain [PF00271.33, score=56.4]; C-terminal domain of RIG-I [PF11648.10, score=53.0]; DEAD/DEAH box helicase [PF00270.31, score=51.4]; RIG-I receptor C-terminal domain [PF18119.3, score=28.9]; SWI2/SNF2 ATPase [PF18766.3, score=24.4]; Terminase large subunit, T4likevirus-type, N-terminal [PF03237.17, score=20.1]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [RH, Score=309, Expect=1e-89]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [RH, Score=293, Expect=5e-84]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=93.2, Expect=8e-19]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=196, Expect=8e-52]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [RH, Score=378, Expect=6e-113]} {RNA1509_32387} {RNA1310_3559.1, RNA1509_32387} {RNA1509_32387, RNA815_2443} |
| 10. | MligTC455_37554 | 366 | 7.63 | Mlig455_049873 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.781/0.04530 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_049873 {REF} {Length: 1263} {TRANSSPLICED} {RNA1509_24750} {RNA1310_22667, RNA1509_24750} {RNA1509_24750, RNA815_17057} | |
| 11. | MligTC455_47639 | 256 | 5.34 | Mlig455_046133 | Neo: - Age: - |
USF2 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_046133 {REF} {Length: 1681} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=50.4]} {Human: ENSG00000105698, USF2, upstream transcription factor 2, c-fos interacting, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000058239, Usf2, upstream transcription factor 2, [Score=57.8, Expect=6e-09]} {Dmel: FBgn0029711, Usf, [Score=54.7, Expect=5e-08]} {Smed: dd_Smed_v6_4871_0_1, dd_Smed_v6_4871_0_1, [RH, Score=55.5, Expect=2e-08]} {RNA1509_24437} {RNA1310_26406} {RNA815_7684} |
| 12. | MligTC455_18480 | 315 | 6.56 | Mlig455_061735 | Neo: - Age: - |
IFT88 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_061735 {REF} {Length: 2911} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=111.5]; Tetratricopeptide repeat [PF00515.30, score=99.8]; Tetratricopeptide repeat [PF13424.8, score=98.0]; Tetratricopeptide repeat [PF13181.8, score=76.6]; Tetratricopeptide repeat [PF14559.8, score=73.4]; Tetratricopeptide repeat [PF13174.8, score=71.8]; Tetratricopeptide repeat [PF13432.8, score=71.3]; Tetratricopeptide repeat [PF13428.8, score=70.8]; Tetratricopeptide repeat [PF13176.8, score=61.6]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=56.4]; TPR repeat [PF13414.8, score=50.2]; Tetratricopeptide repeat [PF13371.8, score=40.5]; Tetratricopeptide repeat [PF13374.8, score=32.0]; Tetratricopeptide repeat-like domain [PF09976.11, score=28.0]; MalT-like TPR region [PF17874.3, score=22.2]; Tetratricopeptide repeat [PF13431.8, score=22.1]} {Human: ENSG00000032742, IFT88, intraflagellar transport 88, [RH, Score=868, Expect=0.0]} {Mouse: ENSMUSG00000040040, Ift88, intraflagellar transport 88, [RH, Score=908, Expect=0.0]} {Dmel: FBgn0016919, nompB, no mechanoreceptor potential B, [RH, Score=349, Expect=1e-107]} {Celegans: WBGene00003885, osm-5, OSM-5, [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_5484_0_1, dd_Smed_v6_5484_0_1, [RH, Score=975, Expect=0.0]} {RNA1509_4056} {RNA1310_1829} {RNA815_705} |