Data search
Results for MligTC455_40414
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40414 | 634 | 13.20 | Mlig455_016516 | Neo: Irradiation Age: Up-Down-Down |
ARID1B | Mlig455_016516 {REF} {Length: 7054} {Pfam: SWI/SNF-like complex subunit BAF250/Osa [PF12031.10, score=100.3]; ARID/BRIGHT DNA binding domain [PF01388.23, score=59.5]} {Human: ENSG00000049618, ARID1B, AT-rich interaction domain 1B, [RH, Score=127, Expect=3e-29]; ENSG00000117713, ARID1A, AT-rich interaction domain 1A, [RH, Score=126, Expect=2e-28]} {Mouse: ENSMUSG00000007880, Arid1a, AT rich interactive domain 1A (SWI-like), [RH, Score=124, Expect=5e-28]; ENSMUSG00000069729, Arid1b, AT rich interactive domain 1B (SWI-like), [RH, Score=123, Expect=1e-27]} {Dmel: FBgn0261885, osa, [RH, Score=164, Expect=3e-40]} {Celegans: WBGene00000476, cfi-1, AT-rich interactive domain-containing protein cfi-1, [Score=100, Expect=9e-22]} {Smed: dd_Smed_v6_6219_0_1, dd_Smed_v6_6219_0_1, [RH, Score=167, Expect=1e-41]} {RNA1509_18250, RNA1509_39475, RNA1509_5882} {RNA1310_784, RNA1509_18250, RNA1509_39475, RNA1509_5882} {RNA1509_18250, RNA1509_39475, RNA1509_5882, RNA815_418} |
Cumulative graph for MligTC455_40414
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.547 | 3.998 | 0.58768 | 1.00000 | |
| RegionR2 | -0.294 | 3.998 | 0.54402 | 0.91084 | |
| RegionR3 | -0.448 | 3.998 | 0.28190 | 0.82541 | |
| RegionR4 | 0.269 | 3.998 | 0.56080 | 0.88042 | |
| RegionR5 | 0.429 | 3.998 | 0.22580 | 0.53024 | |
| RegionR6 | -0.165 | 3.998 | 0.68883 | 1.00000 | |
| RegionR7 | 0.389 | 3.998 | 0.43838 | 1.00000 | |
| RegionR8 | -0.726 | 3.998 | 0.33517 | 0.96773 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.696 | 3.998 | 0.53950 | 1.00000 | |
| RegenerationR2 | 0.557 | 3.998 | 0.17586 | 0.61646 | |
| RegenerationR3 | 0.622 | 3.998 | 0.17952 | 0.61549 | |
| RegenerationR4 | 0.427 | 3.998 | 0.35375 | 0.78298 | |
| RegenerationR5 | 0.021 | 3.998 | 0.95945 | 1.00000 | |
| RegenerationR6 | 0.804 | 3.998 | 0.08210 | 0.35787 | |
| RegenerationBL | -0.475 | 3.998 | 0.45144 | 0.81846 | |
| RegenerationTP | 0.199 | 3.998 | 0.74693 | 1.00000 |
Genes with expression patterns similar to MligTC455_40414
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40414 | 634 | 13.2 | Mlig455_016516 | Neo: Irradiation Age: Up-Down-Down |
ARID1B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_016516 {REF} {Length: 7054} {Pfam: SWI/SNF-like complex subunit BAF250/Osa [PF12031.10, score=100.3]; ARID/BRIGHT DNA binding domain [PF01388.23, score=59.5]} {Human: ENSG00000049618, ARID1B, AT-rich interaction domain 1B, [RH, Score=127, Expect=3e-29]; ENSG00000117713, ARID1A, AT-rich interaction domain 1A, [RH, Score=126, Expect=2e-28]} {Mouse: ENSMUSG00000007880, Arid1a, AT rich interactive domain 1A (SWI-like), [RH, Score=124, Expect=5e-28]; ENSMUSG00000069729, Arid1b, AT rich interactive domain 1B (SWI-like), [RH, Score=123, Expect=1e-27]} {Dmel: FBgn0261885, osa, [RH, Score=164, Expect=3e-40]} {Celegans: WBGene00000476, cfi-1, AT-rich interactive domain-containing protein cfi-1, [Score=100, Expect=9e-22]} {Smed: dd_Smed_v6_6219_0_1, dd_Smed_v6_6219_0_1, [RH, Score=167, Expect=1e-41]} {RNA1509_18250, RNA1509_39475, RNA1509_5882} {RNA1310_784, RNA1509_18250, RNA1509_39475, RNA1509_5882} {RNA1509_18250, RNA1509_39475, RNA1509_5882, RNA815_418} |
| 2. | MligTC455_50917 | 835 | 17.4 | Mlig455_028674 | Neo: Int S/G2/M Age: Up-Up-Down |
1.719 | 0.743 | - | - | 0.976 | - | - | Mlig455_028674 {REF} {Length: 3683} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=95.3]} {Smed: dd_Smed_v6_12013_0_1, dd_Smed_v6_12013_0_1, [Score=64.7, Expect=8e-11]} {RNA1509_8219} {RNA1310_6966.1} {RNA815_1972.1} | |
| 3. | MligTC455_26484 | 740 | 15.42 | Mlig455_001957 | Neo: - Age: - |
ABCB7 | 0.977 | - | - | - | 0.977 | - | - | Mlig455_001957 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: ABC transporter [PF00005.29, score=113.5]; ABC transporter transmembrane region [PF00664.25, score=112.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=30.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=747, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=737, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=715, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=702, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013} |
| 4. | MligTC455_26485 | 1568 | 32.66 | Mlig455_002056, Mlig455_060890 | Neo: - Age: - |
ABCB7 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_002056 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=106.7]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [Score=375, Expect=5e-121]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [Score=369, Expect=9e-118]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [Score=355, Expect=9e-113]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [Score=345, Expect=3e-109]} {Smed: dd_Smed_v6_6005_0_1, dd_Smed_v6_6005_0_1, [Score=358, Expect=4e-115]} {RNA1509_5332} {RNA1310_8149.1} {RNA815_3013} Mlig455_060890 {REF} {Length: 3295} {Pfam: ABC transporter transmembrane region [PF00664.25, score=115.3]; ABC transporter [PF00005.29, score=114.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=31.8]} {Human: ENSG00000131269, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=748, Expect=0.0]} {Mouse: ENSMUSG00000031333, Abcb7, ATP-binding cassette, sub-family B (MDR/TAP), member 7, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0035244, ABCB7, ATP binding cassette subfamily B member 7, [RH, Score=713, Expect=0.0]} {Celegans: WBGene00022281, abtm-1, ABC Transporter, Mitochondrial, [RH, Score=709, Expect=0.0]} {Smed: dd_Smed_v6_6005_0_2, dd_Smed_v6_6005_0_2, [RH, Score=735, Expect=0.0]} {RNA1509_5332, RNA1509_56336} {RNA1310_8149.1, RNA1509_5332, RNA1509_56336} {RNA1509_5332, RNA1509_56336, RNA815_3013} |
| 5. | MligTC455_42164 | 65 | 1.35 | Mlig455_049056 | Neo: Int S/G2/M Age: Down-Up-Down |
DR1 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_049056 {REF} {Length: 1819} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_7108} {RNA1310_37108, RNA1509_7108} {RNA1509_7108, RNA815_17293} |
| 6. | MligTC455_45822 | 733 | 15.27 | Mlig455_030111, Mlig455_030180 | Neo: - Age: - Region-enriched R4: 2.554/0.00328 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_030111 {REF} {Length: 2896} {TRANSSPLICED} {Pfam: Mitotic-spindle organizing gamma-tubulin ring associated [PF12926.9, score=29.8]} {RNA1509_27378, RNA1509_41692} {RNA1310_18834, RNA1509_41692} {RNA1509_41692, RNA815_11733} Mlig455_030180 {REF} {Length: 2897} {TRANSSPLICED} {Pfam: Mitotic-spindle organizing gamma-tubulin ring associated [PF12926.9, score=29.8]} {RNA1509_27378, RNA1509_49391} {RNA1310_18834, RNA1509_49391} {RNA1509_49391, RNA815_11733} |
|
| 7. | MligTC455_48345 | 152 | 3.17 | Mlig455_016743 | Neo: - Age: logFC(26M/2M)=-0.564 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_016743 {REF} {Length: 2816} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=22.2]} {RNA1509_12740} {RNA1310_9917} {RNA815_21671} | |
| 8. | MligTC455_37583 | 184 | 3.83 | Mlig455_054663, Mlig455_055173 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_054663 {REF} {Length: 976} {NoTransDecoderORF} {RNA1310_56588} {RNA815_52400} Mlig455_055173 {REF} {Length: 2731} {RNA1509_22369} {RNA1310_56588} {RNA815_52400} |
|
| 9. | MligTC455_19071 | 245 | 5.1 | Mlig455_015327, Mlig455_015370 | Neo: - Age: logFC(26M/2M)=-1.030 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_015327 {REF} {Length: 1144} {RNA1509_45342} {RNA1310_18407} {RNA815_30771} Mlig455_015370 {REF} {Length: 1190} {RNA1509_45342} {RNA1310_18407} {RNA815_30771} |
|
| 10. | MligTC455_27764 | 841 | 17.53 | Mlig455_004966 | Neo: - Age: Up-Up-Down |
USP24 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_004966 {REF} {Length: 8485} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=146.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=62.6]} {Human: ENSG00000162402, USP24, ubiquitin specific peptidase 24, [Score=386, Expect=2e-107]} {Mouse: ENSMUSG00000028514, Usp24, ubiquitin specific peptidase 24, [Score=385, Expect=2e-107]} {Dmel: FBgn0005632, faf, fat facets, [Score=261, Expect=2e-69]} {Celegans: WBGene00011980, T24B8.7, Ubiquitin carboxyl-terminal hydrolase, [Score=193, Expect=8e-49]} {Smed: dd_Smed_v6_2963_0_1, dd_Smed_v6_2963_0_1, [Score=240, Expect=2e-63]} {RNA1509_2363} {RNA1310_218.1, RNA1509_2363} {RNA1509_2363, RNA815_823} |
| 11. | MligTC455_33111 | 324 | 6.75 | Mlig455_032809 | Neo: - Age: Up-Down-Down |
SFXN5 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_032809 {REF} {Length: 2230} {TRANSSPLICED} {Pfam: Sideroflexins [PF03820.19, score=395.7]} {Human: ENSG00000144040, SFXN5, sideroflexin 5, [RH, Score=407, Expect=1e-142]} {Mouse: ENSMUSG00000033720, Sfxn5, sideroflexin 5, [RH, Score=409, Expect=2e-143]} {Dmel: FBgn0037239, Sfxn1-3, Sideroflexin 1/3, [Score=186, Expect=2e-56]} {Celegans: WBGene00044049, sfxn-5, Sideroflexin-5, [RH, Score=324, Expect=3e-110]} {Smed: dd_Smed_v6_12292_0_1, dd_Smed_v6_12292_0_1, [Score=217, Expect=2e-68]} {RNA1509_40289} {RNA1310_26554, RNA1509_40289} {RNA1509_40289, RNA815_12239} |
| 12. | MligTC455_54261 | 134 | 2.8 | Mlig455_059557 | Neo: - Age: Up-Down-Down |
SLC27A4 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_059557 {REF} {Length: 3920} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=240.8]; AMP-binding enzyme C-terminal domain [PF13193.8, score=30.4]} {Human: ENSG00000167114, SLC27A4, solute carrier family 27 member 4, [RH, Score=640, Expect=0.0]; ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=627, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0267828, Fatp, Fatty acid (long chain) transport protein, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=494, Expect=1e-167]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_18148} {RNA1310_5176, RNA1509_18148} {RNA1509_18148, RNA815_3662} |
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