Data search
Results for MligTC455_40415
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40415 | 514 | 10.72 | Mlig455_031581 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.083/0.03407 |
ARID1B | Mlig455_031581 {REF} {Length: 6441} {TRANSSPLICED} {Pfam: SWI/SNF-like complex subunit BAF250/Osa [PF12031.10, score=100.5]; ARID/BRIGHT DNA binding domain [PF01388.23, score=59.5]} {Human: ENSG00000049618, ARID1B, AT-rich interaction domain 1B, [RH, Score=127, Expect=3e-29]; ENSG00000117713, ARID1A, AT-rich interaction domain 1A, [RH, Score=126, Expect=2e-28]} {Mouse: ENSMUSG00000007880, Arid1a, AT rich interactive domain 1A (SWI-like), [RH, Score=124, Expect=4e-28]; ENSMUSG00000069729, Arid1b, AT rich interactive domain 1B (SWI-like), [RH, Score=123, Expect=1e-27]} {Dmel: FBgn0261885, osa, [RH, Score=163, Expect=4e-40]} {Celegans: WBGene00000476, cfi-1, AT-rich interactive domain-containing protein cfi-1, [Score=100, Expect=8e-22]} {Smed: dd_Smed_v6_6219_0_1, dd_Smed_v6_6219_0_1, [Score=167, Expect=1e-41]} {RNA1509_57145, RNA1509_5882} {RNA1310_784, RNA1509_57145} {RNA1509_57145, RNA815_418} |
Cumulative graph for MligTC455_40415
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.895 | 3.832 | 0.27127 | 0.92166 | |
| RegionR2 | 0.588 | 3.832 | 0.29168 | 0.67993 | |
| RegionR3 | -0.602 | 3.832 | 0.27457 | 0.81907 | |
| RegionR4 | 0.184 | 3.832 | 0.72341 | 1.00000 | |
| RegionR5 | 1.083 | 3.832 | 0.00489 | 0.03407 | |
| RegionR6 | 0.065 | 3.832 | 0.88973 | 1.00000 | |
| RegionR7 | 0.525 | 3.832 | 0.37908 | 1.00000 | |
| RegionR8 | 0.052 | 3.832 | 0.94850 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.909 | 3.832 | 0.36457 | 1.00000 | |
| RegenerationR2 | -0.075 | 3.832 | 0.85288 | 1.00000 | |
| RegenerationR3 | 0.911 | 3.832 | 0.05992 | 0.41690 | |
| RegenerationR4 | -0.031 | 3.832 | 0.94569 | 1.00000 | |
| RegenerationR5 | -0.175 | 3.832 | 0.65602 | 0.93417 | |
| RegenerationR6 | 0.571 | 3.832 | 0.22169 | 0.56609 | |
| RegenerationBL | -0.367 | 3.832 | 0.55989 | 0.91492 | |
| RegenerationTP | 0.006 | 3.832 | 0.99181 | 1.00000 |
Genes with expression patterns similar to MligTC455_40415
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40415 | 514 | 10.72 | Mlig455_031581 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.083/0.03407 |
ARID1B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031581 {REF} {Length: 6441} {TRANSSPLICED} {Pfam: SWI/SNF-like complex subunit BAF250/Osa [PF12031.10, score=100.5]; ARID/BRIGHT DNA binding domain [PF01388.23, score=59.5]} {Human: ENSG00000049618, ARID1B, AT-rich interaction domain 1B, [RH, Score=127, Expect=3e-29]; ENSG00000117713, ARID1A, AT-rich interaction domain 1A, [RH, Score=126, Expect=2e-28]} {Mouse: ENSMUSG00000007880, Arid1a, AT rich interactive domain 1A (SWI-like), [RH, Score=124, Expect=4e-28]; ENSMUSG00000069729, Arid1b, AT rich interactive domain 1B (SWI-like), [RH, Score=123, Expect=1e-27]} {Dmel: FBgn0261885, osa, [RH, Score=163, Expect=4e-40]} {Celegans: WBGene00000476, cfi-1, AT-rich interactive domain-containing protein cfi-1, [Score=100, Expect=8e-22]} {Smed: dd_Smed_v6_6219_0_1, dd_Smed_v6_6219_0_1, [Score=167, Expect=1e-41]} {RNA1509_57145, RNA1509_5882} {RNA1310_784, RNA1509_57145} {RNA1509_57145, RNA815_418} |
| 2. | MligTC455_41113 | 631 | 13.14 | Mlig455_053556 | Neo: - Age: - Region-enriched R5: 1.520/0.04923 |
OPA1 | 1.765 | 0.812 | - | - | 0.953 | - | - | Mlig455_053556 {REF} {Length: 3245} {TRANSSPLICED} {Pfam: Dynamin-like GTPase OPA1 C-terminal [PF19434.1, score=602.1]; Dynamin family [PF00350.25, score=122.8]; 50S ribosome-binding GTPase [PF01926.25, score=23.5]} {Human: ENSG00000198836, OPA1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=730, Expect=0.0]} {Mouse: ENSMUSG00000038084, Opa1, OPA1, mitochondrial dynamin like GTPase, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0261276, Opa1, Optic atrophy 1, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001134, eat-3, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_7981_0_2, dd_Smed_v6_7981_0_2, [RH, Score=644, Expect=0.0]} {RNA1509_34607, RNA1509_45369} {RNA1310_4411, RNA1509_45369} {RNA1509_45369, RNA815_1436} |
| 3. | MligTC455_32181 | 167 | 3.47 | Mlig455_024277 | Neo: Irradiation Age: logFC(26M/2M)=0.310 |
GTF2H2C_2 | 0.956 | 0.956 | - | - | - | - | - | Mlig455_024277 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Ssl1-like [PF04056.16, score=211.4]; von Willebrand factor type A domain [PF13519.8, score=35.9]; TFIIH C1-like domain [PF07975.14, score=33.0]} {Human: ENSG00000274675, GTF2H2C_2, GTF2H2 family member C, copy 2, [RH, Score=305, Expect=5e-100]; ENSG00000183474, GTF2H2C, GTF2H2 family member C, [RH, Score=305, Expect=5e-100]; ENSG00000276910, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000275045, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]; ENSG00000145736, GTF2H2, general transcription factor IIH subunit 2, [RH, Score=301, Expect=1e-98]} {Mouse: ENSMUSG00000021639, Gtf2h2, general transcription factor II H, polypeptide 2, [RH, Score=306, Expect=9e-101]} {Dmel: FBgn0037202, Ssl1, Suppressor of stem-loop mutation, [RH, Score=328, Expect=8e-109]} {Celegans: WBGene00011814, T16H12.4, General transcription factor IIH subunit 2, [RH, Score=251, Expect=1e-79]} {Smed: dd_Smed_v6_7018_0_1, dd_Smed_v6_7018_0_1, [RH, Score=278, Expect=5e-90]} {RNA1509_19373} {RNA1310_19775, RNA1509_19373} {RNA1509_19373, RNA815_8031} |
| 4. | MligTC455_31862 | 185 | 3.86 | Mlig455_010898 | Neo: - Age: Up-Down-Down |
HCRTR1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_010898 {REF} {Length: 3607} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=152.1]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=28.5]} {Human: ENSG00000121764, HCRTR1, hypocretin receptor 1, [Score=100, Expect=2e-22]; ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=100, Expect=2e-22]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=96.3, Expect=4e-21]; ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=96.3, Expect=4e-21]; ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=95.9, Expect=3e-21]} {Mouse: ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=108, Expect=1e-25]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [Score=95.5, Expect=9e-21]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [RH, Score=131, Expect=7e-33]} {Smed: dd_Smed_v6_56182_0_1, dd_Smed_v6_56182_0_1, [Score=135, Expect=2e-37]} {RNA1509_56148} {RNA1310_5450.1} {RNA815_7136.1} |
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