Data search
Results for MligTC455_40457
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40457 | 29 | 0.60 | Mlig455_006177 | Neo: - Age: - Region-enriched R4: 1.180/0.03239 |
KDM2A | Mlig455_006177 {REF} {Length: 8298} {Human: ENSG00000173120, KDM2A, lysine demethylase 2A, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000054611, Kdm2a, lysine (K)-specific demethylase 2A, [Score=48.5, Expect=7e-06]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [Score=52.0, Expect=3e-07]} {Celegans: WBGene00017920, jmjd-1.2, Lysine-specific demethylase 7 homolog, [Score=58.2, Expect=2e-09]} {Smed: dd_Smed_v6_8433_0_1, dd_Smed_v6_8433_0_1, [Score=50.4, Expect=6e-08]} {RNA1509_52195} {RNA1310_43422} {RNA815_45954} |
Cumulative graph for MligTC455_40457
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.887 | 1.105 | 0.99978 | 1.00000 | |
| RegionR2 | -0.096 | 1.105 | 0.99985 | 1.00000 | |
| RegionR3 | -2.938 | 1.105 | 0.99988 | 1.00000 | |
| RegionR4 | 1.18 | 1.105 | 0.00431 | 0.03239 | |
| RegionR5 | -2.299 | 1.105 | 1.00000 | 1.00000 | |
| RegionR6 | 1.201 | 1.105 | 0.99983 | 1.00000 | |
| RegionR7 | 0.588 | 1.105 | 0.99989 | 1.00000 | |
| RegionR8 | 0.477 | 1.105 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.939 | 1.105 | 0.99987 | 1.00000 | |
| RegenerationR2 | 1.456 | 1.105 | 0.99960 | 1.00000 | |
| RegenerationR3 | 2.246 | 1.105 | 1.00000 | 1.00000 | |
| RegenerationR4 | -0.238 | 1.105 | 1.00000 | 1.00000 | |
| RegenerationR5 | -0.403 | 1.105 | 0.99984 | 1.00000 | |
| RegenerationR6 | -1.625 | 1.105 | 0.99952 | 1.00000 | |
| RegenerationBL | -1.437 | 1.105 | 0.99992 | 1.00000 | |
| RegenerationTP | -1.541 | 1.105 | 0.99991 | 1.00000 |
Genes with expression patterns similar to MligTC455_40457
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40457 | 29 | 0.6 | Mlig455_006177 | Neo: - Age: - Region-enriched R4: 1.180/0.03239 |
KDM2A | 1 | - | - | - | - | 1.000 | - | Mlig455_006177 {REF} {Length: 8298} {Human: ENSG00000173120, KDM2A, lysine demethylase 2A, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000054611, Kdm2a, lysine (K)-specific demethylase 2A, [Score=48.5, Expect=7e-06]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [Score=52.0, Expect=3e-07]} {Celegans: WBGene00017920, jmjd-1.2, Lysine-specific demethylase 7 homolog, [Score=58.2, Expect=2e-09]} {Smed: dd_Smed_v6_8433_0_1, dd_Smed_v6_8433_0_1, [Score=50.4, Expect=6e-08]} {RNA1509_52195} {RNA1310_43422} {RNA815_45954} |
| 2. | MligTC455_11001 | 156 | 3.25 | Mlig455_036888 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.348 Region-specific R4: 6.400 Region-enriched R4: 3.582/0.00066 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_036888 {REF} {Length: 3432} {RNA1509_17187, RNA1509_26632} {RNA1310_3482.1, RNA1509_17187, RNA1509_26632} {RNA1509_17187, RNA1509_26632, RNA815_5108.1} | |
| 3. | MligTC455_14819 | 34 | 0.71 | Mlig455_042373 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_042373 {REF} {Length: 305} {NoTransDecoderORF} {RNA1310_4527.2} |
Berezikov Lab - 2020-2021 © ERIBA