Data search
Results for MligTC455_40472
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40472 | 584 | 12.17 | Mlig455_019503, Mlig455_066908 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.094/0.00273 |
Mlig455_019503 {REF} {Length: 3315} {TRANSSPLICED} {RNA1509_31741} {RNA1310_4602.1} {RNA815_1551.1} Mlig455_066908 {REF} {Length: 3455} {RNA1509_10911, RNA1509_31741} {RNA1310_5401.2, RNA1509_10911, RNA1509_31741} {RNA1509_10911, RNA1509_31741, RNA815_1551.1} |
Cumulative graph for MligTC455_40472
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.68 | 3.972 | 0.54078 | 1.00000 | |
| RegionR2 | 0.292 | 3.972 | 0.53118 | 0.90259 | |
| RegionR3 | -0.183 | 3.972 | 0.63125 | 1.00000 | |
| RegionR4 | -0.265 | 3.972 | 0.52418 | 0.84845 | |
| RegionR5 | 1.094 | 3.972 | 0.00019 | 0.00273 | |
| RegionR6 | -0.049 | 3.972 | 0.90186 | 1.00000 | |
| RegionR7 | 0.645 | 3.972 | 0.18379 | 0.78313 | |
| RegionR8 | -0.855 | 3.972 | 0.28552 | 0.91294 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.216 | 3.972 | 0.18062 | 0.92306 | |
| RegenerationR2 | -0.186 | 3.972 | 0.61552 | 0.92174 | |
| RegenerationR3 | 0.348 | 3.972 | 0.39378 | 0.79862 | |
| RegenerationR4 | 0.064 | 3.972 | 0.87160 | 1.00000 | |
| RegenerationR5 | -0.037 | 3.972 | 0.91020 | 1.00000 | |
| RegenerationR6 | 0.813 | 3.972 | 0.03848 | 0.24476 | |
| RegenerationBL | 0.863 | 3.972 | 0.09157 | 0.35512 | |
| RegenerationTP | 0.881 | 3.972 | 0.12923 | 0.54181 |
Genes with expression patterns similar to MligTC455_40472
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40472 | 584 | 12.17 | Mlig455_019503, Mlig455_066908 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.094/0.00273 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019503 {REF} {Length: 3315} {TRANSSPLICED} {RNA1509_31741} {RNA1310_4602.1} {RNA815_1551.1} Mlig455_066908 {REF} {Length: 3455} {RNA1509_10911, RNA1509_31741} {RNA1310_5401.2, RNA1509_10911, RNA1509_31741} {RNA1509_10911, RNA1509_31741, RNA815_1551.1} |
|
| 2. | MligTC455_33391 | 245 | 5.11 | Mlig455_059002 | Neo: - Age: - Region-enriched R5: 1.787/0.02115 |
2.543 | - | - | 0.957 | - | 0.813 | 0.773 | Mlig455_059002 {REF} {Length: 2432} {RNA1509_27032} {RNA1310_42017, RNA1509_27032} {RNA1509_27032, RNA815_23922} | |
| 3. | MligTC455_22406 | 1581 | 32.93 | Mlig455_035553, Mlig455_035577 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.163/0.00002 |
UPRT | 2.467 | 0.784 | - | - | 0.961 | - | 0.722 | Mlig455_035553 {REF} {Length: 4244} {TRANSSPLICED} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=147.3]} {Human: ENSG00000094841, UPRT, uracil phosphoribosyltransferase homolog, [RH, Score=232, Expect=4e-75]} {Mouse: ENSMUSG00000073016, Uprt, uracil phosphoribosyltransferase, [RH, Score=236, Expect=6e-77]} {Dmel: FBgn0035639, kri, krishah, [RH, Score=230, Expect=3e-75]} {Celegans: WBGene00008131, C47B2.2, [RH, Score=197, Expect=1e-62]} {Smed: dd_Smed_v6_6546_0_1, dd_Smed_v6_6546_0_1, [RH, Score=226, Expect=2e-74]} {RNA1509_14966} {RNA1310_21510.1, RNA1509_14966} {RNA1509_14966, RNA815_14342} Mlig455_035577 {REF} {Length: 3843} {TRANSSPLICED} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=148.6]} {Human: ENSG00000094841, UPRT, uracil phosphoribosyltransferase homolog, [RH, Score=233, Expect=2e-75]} {Mouse: ENSMUSG00000073016, Uprt, uracil phosphoribosyltransferase, [RH, Score=238, Expect=2e-77]} {Dmel: FBgn0035639, kri, krishah, [RH, Score=228, Expect=2e-74]} {Celegans: WBGene00008131, C47B2.2, [RH, Score=197, Expect=1e-62]} {Smed: dd_Smed_v6_6546_0_1, dd_Smed_v6_6546_0_1, [RH, Score=226, Expect=2e-74]} {RNA1509_14966, RNA1509_28339} {RNA1310_21510.1, RNA1509_28339} {RNA1509_28339, RNA815_14342} |
| 4. | MligTC455_03563 | 760 | 15.83 | Mlig455_025786 | Neo: Int S/G2/M Age: - |
POLR2B | 2.435 | 0.703 | - | 0.953 | 0.779 | - | - | Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603} |
| 5. | MligTC455_43936 | 1101 | 22.94 | Mlig455_061698, Mlig455_063087 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.462 Region-enriched R5: 2.379/0.00000 |
1.738 | - | - | 0.953 | - | 0.785 | - | Mlig455_061698 {REF} {Length: 2311} {TRANSSPLICED} {RNA1509_44862, RNA1509_7216} {RNA1310_10758.1, RNA1509_44862} {RNA1509_44862, RNA815_5923} Mlig455_063087 {REF} {Length: 2275} {TRANSSPLICED} {RNA1509_7216} {RNA1310_10758.1} {RNA815_5923} |
|
| 6. | MligTC455_48567 | 358 | 7.45 | Mlig455_043150 | Neo: - Age: - Region-enriched R5: 1.668/0.02982 |
1.717 | - | - | 0.960 | 0.757 | - | - | Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1} | |
| 7. | MligTC455_16260 | 603 | 12.56 | Mlig455_002484, Mlig455_002684 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.454/0.00788 |
1.709 | - | - | - | 0.954 | 0.755 | - | Mlig455_002484 {REF} {Length: 1522} {TRANSSPLICED} {RNA1509_21338, RNA1509_38517} {RNA1310_18954, RNA1509_21338, RNA1509_38517} {RNA1509_21338, RNA1509_38517, RNA815_18632} Mlig455_002684 {REF} {Length: 1523} {TRANSSPLICED} {RNA1509_21338} {RNA1310_18954} {RNA815_18632} |
|
| 8. | MligTC455_23399 | 761 | 15.85 | Mlig455_009081 | Neo: - Age: - |
NGLY1 | 1.69 | 0.733 | - | 0.957 | - | - | - | Mlig455_009081 {REF} {Length: 4231} {TRANSSPLICED} {Pfam: PNGase C-terminal domain, mannose-binding module PAW [PF04721.19, score=208.6]; PUB domain [PF09409.12, score=60.3]; Rad4 transglutaminase-like domain [PF03835.17, score=47.0]; Transglutaminase-like superfamily [PF01841.21, score=45.1]; Thioredoxin [PF00085.22, score=44.8]} {Human: ENSG00000151092, NGLY1, N-glycanase 1, [RH, Score=396, Expect=4e-125]} {Mouse: ENSMUSG00000021785, Ngly1, N-glycanase 1, [RH, Score=412, Expect=2e-131]} {Dmel: FBgn0033050, Pngl, PNGase-like, [RH, Score=309, Expect=8e-93]} {Celegans: WBGene00010160, png-1, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, [RH, Score=260, Expect=2e-75]} {Smed: dd_Smed_v6_5705_0_1, dd_Smed_v6_5705_0_1, [RH, Score=290, Expect=1e-84]} {RNA1509_9974} {RNA1310_3958, RNA1509_9974} {RNA1509_9974, RNA815_834.1} |
| 9. | MligTC455_22405 | 816 | 17.01 | Mlig455_019226 | Neo: - Age: - Region-enriched R4: 1.356/0.00404 |
UPRT | 1.67 | - | - | - | 0.961 | - | 0.709 | Mlig455_019226 {REF} {Length: 3530} {TRANSSPLICED} {Pfam: Uracil phosphoribosyltransferase [PF14681.8, score=148.6]} {Human: ENSG00000094841, UPRT, uracil phosphoribosyltransferase homolog, [RH, Score=233, Expect=2e-75]} {Mouse: ENSMUSG00000073016, Uprt, uracil phosphoribosyltransferase, [RH, Score=238, Expect=2e-77]} {Dmel: FBgn0035639, kri, krishah, [RH, Score=228, Expect=2e-74]} {Celegans: WBGene00008131, C47B2.2, [RH, Score=197, Expect=1e-62]} {Smed: dd_Smed_v6_6546_0_1, dd_Smed_v6_6546_0_1, [RH, Score=226, Expect=2e-74]} {RNA1509_14966} {RNA1310_21510.1} {RNA815_14342} |
| 10. | MligTC455_06930 | 595 | 12.39 | Mlig455_036374 | Neo: - Age: - |
GNA13 | 0.969 | - | - | 0.969 | - | - | - | Mlig455_036374 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: G-protein alpha subunit [PF00503.22, score=205.8]; ADP-ribosylation factor family [PF00025.23, score=32.3]} {Human: ENSG00000120063, GNA13, G protein subunit alpha 13, [Score=182, Expect=4e-53]} {Mouse: ENSMUSG00000020611, Gna13, guanine nucleotide binding protein, alpha 13, [Score=184, Expect=1e-53]} {Dmel: FBgn0000384, cta, concertina, [Score=172, Expect=1e-48]} {Celegans: WBGene00001196, egl-30, EGL-30; Heterotrimeric G protein alpha subunit, [Score=169, Expect=1e-48]} {Smed: dd_Smed_v6_2931_0_1, dd_Smed_v6_2931_0_1, [Score=191, Expect=2e-56]} {RNA1509_5056} {RNA1310_20481, RNA1509_5056} {RNA1509_5056, RNA815_8404.1} |
| 11. | MligTC455_26012 | 929 | 19.36 | Mlig455_049208 | Neo: - Age: - |
GTF2B | 0.969 | - | - | - | 0.969 | - | - | Mlig455_049208 {REF} {Length: 2100} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_8246} {RNA815_13955} |
| 12. | MligTC455_26011 | 1089 | 22.7 | Mlig455_049155 | Neo: - |
GTF2B | 0.968 | - | - | - | 0.968 | - | - | Mlig455_049155 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=167.0]; TFIIB zinc-binding [PF08271.14, score=42.3]; Cyclin, N-terminal domain [PF00134.25, score=34.8]; F5/8 type C domain [PF00754.27, score=21.9]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [RH, Score=372, Expect=6e-126]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [RH, Score=372, Expect=3e-126]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [RH, Score=375, Expect=1e-127]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [RH, Score=323, Expect=3e-107]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [RH, Score=308, Expect=2e-101]} {RNA1509_32364} {RNA1310_8246} {RNA815_13955} |
| 13. | MligTC455_49930 | 640 | 13.34 | Mlig455_011432 | Neo: Irradiation Age: logFC(26M/2M)=0.323 Region-enriched R5: 1.243/0.00950 |
FBXO40 | 0.963 | - | - | 0.963 | - | - | - | Mlig455_011432 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: TRAF-like zinc-finger [PF15965.7, score=65.0]; F-box [PF15966.7, score=32.6]; F-box domain [PF00646.35, score=24.5]; F-box-like [PF12937.9, score=22.2]} {Human: ENSG00000163833, FBXO40, F-box protein 40, [RH, Score=74.3, Expect=2e-13]; ENSG00000118496, FBXO30, F-box protein 30, [RH, Score=72.8, Expect=7e-13]} {Mouse: ENSMUSG00000047746, Fbxo40, F-box protein 40, [RH, Score=74.3, Expect=2e-13]} {Smed: dd_Smed_v6_11811_0_6, dd_Smed_v6_11811_0_6, [RH, Score=80.9, Expect=4e-16]} {RNA1509_34000} {RNA1310_16619} {RNA815_5398.1} |
| 14. | MligTC455_09626 | 272 | 5.66 | Mlig455_026162 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309} | |
| 15. | MligTC455_34202 | 3833 | 79.86 | Mlig455_054778, Mlig455_054871 | Neo: - Age: - |
RAP1B | 0.952 | - | - | - | 0.952 | - | - | Mlig455_054778 {REF} {Length: 2130} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=198.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.0]; ADP-ribosylation factor family [PF00025.23, score=36.5]; RsgA GTPase [PF03193.18, score=26.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.8]} {Human: ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [RH, Score=319, Expect=1e-112]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [RH, Score=310, Expect=6e-109]} {Mouse: ENSMUSG00000052681, Rap1b, RAS related protein 1b, [RH, Score=319, Expect=9e-113]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [RH, Score=310, Expect=4e-109]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [RH, Score=298, Expect=2e-104]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [RH, Score=311, Expect=9e-110]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [RH, Score=313, Expect=1e-110]} {RNA1509_2690, RNA1509_39092} {RNA1310_29333, RNA1509_2690, RNA1509_39092} {RNA1509_2690, RNA1509_39092, RNA815_11870} Mlig455_054871 {REF} {Length: 2474} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=198.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.0]; ADP-ribosylation factor family [PF00025.23, score=36.5]; RsgA GTPase [PF03193.18, score=26.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=19.8]} {Human: ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [RH, Score=319, Expect=1e-112]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [RH, Score=310, Expect=6e-109]} {Mouse: ENSMUSG00000052681, Rap1b, RAS related protein 1b, [RH, Score=319, Expect=9e-113]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [RH, Score=310, Expect=4e-109]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [RH, Score=298, Expect=2e-104]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [RH, Score=311, Expect=9e-110]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [RH, Score=313, Expect=1e-110]} {RNA1509_2690} {RNA1310_29333} {RNA815_11870} |
| 16. | MligTC455_16009 | 503 | 10.48 | Mlig455_030400, Mlig455_069024 | Neo: Irradiation Age: - Region-specific R5: 4.809 Region-enriched R5: 3.937/0.00000 |
P2RY2 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_030400 {REF} {Length: 3994} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.8]} {Human: ENSG00000175591, P2RY2, purinergic receptor P2Y2, [Score=50.1, Expect=5e-06]} {Smed: dd_Smed_v6_27989_0_1, dd_Smed_v6_27989_0_1, [Score=152, Expect=2e-42]} {RNA1509_31426} {RNA1310_13255.1, RNA1509_31426} {RNA1509_31426, RNA815_6582} Mlig455_069024 {REF} {Length: 3725} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.8]} {Human: ENSG00000175591, P2RY2, purinergic receptor P2Y2, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_27989_0_1, dd_Smed_v6_27989_0_1, [Score=152, Expect=1e-42]} {RNA1509_31426, RNA1509_35606} {RNA1310_13255.1, RNA1509_35606} {RNA1509_35606, RNA815_6582} |