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Results for MligTC455_40505

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40505 1404 29.25 Mlig455_020148

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.392

 PIM1 Mlig455_020148 {REF} {Length: 3184} {Pfam: Protein kinase domain [PF00069.27, score=192.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.2]; ABC1 atypical kinase-like domain [PF03109.18, score=21.0]; Kinase-like [PF14531.8, score=19.0]} {Human: ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=270, Expect=9e-87]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=272, Expect=8e-88]} {Dmel: FBgn0262617, CG43143, [Score=137, Expect=5e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=217, Expect=4e-65]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=273, Expect=6e-87]} {RNA1509_21287, RNA1509_50539, RNA1509_5863} {RNA1310_16565.1, RNA1509_21287, RNA1509_50539, RNA1509_5863} {RNA1509_21287, RNA1509_50539, RNA1509_5863, RNA815_11560}

Cumulative graph for MligTC455_40505

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.091 5.108 0.24013 0.88658
RegionR2 -0.224 5.108 0.73511 1.00000
RegionR3 -0.665 5.108 0.26357 0.80852
RegionR4 0.695 5.108 0.23600 0.53046
RegionR5 -0.058 5.108 0.90807 1.00000
RegionR6 -0.251 5.108 0.64190 1.00000
RegionR7 -0.159 5.108 0.78063 1.00000
RegionR8 -0.429 5.108 0.53727 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -9.162 5.108 0.00549 0.36142
RegenerationR2 0.376 5.108 0.56209 0.89998
RegenerationR3 -0.182 5.108 0.79444 0.98024
RegenerationR4 -2.306 5.108 0.00122 0.04052
RegenerationR5 -0.549 5.108 0.41628 0.80934
RegenerationR6 -0.077 5.108 0.91201 1.00000
RegenerationBL 0.189 5.108 0.78234 1.00000
RegenerationTP -1.906 5.108 0.02229 0.25426


Genes with expression patterns similar to MligTC455_40505

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40505 1404 29.25 Mlig455_020148

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.392

 PIM1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020148 {REF} {Length: 3184} {Pfam: Protein kinase domain [PF00069.27, score=192.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=23.2]; ABC1 atypical kinase-like domain [PF03109.18, score=21.0]; Kinase-like [PF14531.8, score=19.0]} {Human: ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=270, Expect=9e-87]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=272, Expect=8e-88]} {Dmel: FBgn0262617, CG43143, [Score=137, Expect=5e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=217, Expect=4e-65]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=273, Expect=6e-87]} {RNA1509_21287, RNA1509_50539, RNA1509_5863} {RNA1310_16565.1, RNA1509_21287, RNA1509_50539, RNA1509_5863} {RNA1509_21287, RNA1509_50539, RNA1509_5863, RNA815_11560}
2. MligTC455_00600 63 1.31 Mlig455_053978

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_053978 {REF} {Length: 1009} {Pfam: Arenavirus nucleocapsid C-terminal domain [PF17290.4, score=18.2]} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
3. MligTC455_34343 416 8.67 Mlig455_014651

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_014651 {REF} {Length: 1002} {NoTransDecoderORF} {RNA1509_44079} {RNA1310_51846} {RNA815_19953}
4. MligTC455_19788 74 1.54 Mlig455_065394

Neo: -

Age: -

 0.959 - - - 0.959 - - Mlig455_065394 {REF} {Length: 5210} {NoTransDecoderORF} {RNA1509_38967} {RNA1310_46416} {RNA815_8805}
5. MligTC455_26372 617 12.86 Mlig455_043689, Mlig455_047469

Neo: -

Age: -

 SRD5A3 0.956 - - - - 0.956 -

Mlig455_043689 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=58.6]} {Human: ENSG00000128039, SRD5A3, steroid 5 alpha-reductase 3, [RH, Score=100, Expect=1e-23]} {Mouse: ENSMUSG00000029233, Srd5a3, steroid 5 alpha-reductase 3, [RH, Score=94.7, Expect=7e-22]} {Dmel: FBgn0032014, CG7840, [RH, Score=105, Expect=7e-26]} {Celegans: WBGene00007102, B0024.13, Polyprenol reductase, [RH, Score=94.0, Expect=5e-22]} {RNA1509_19631} {RNA1310_28529.1} {RNA815_21414}

Mlig455_047469 {REF} {Length: 1060} {TRANSSPLICED} {Pfam: 3-oxo-5-alpha-steroid 4-dehydrogenase [PF02544.18, score=60.0]} {Human: ENSG00000128039, SRD5A3, steroid 5 alpha-reductase 3, [RH, Score=99.8, Expect=1e-23]} {Mouse: ENSMUSG00000029233, Srd5a3, steroid 5 alpha-reductase 3, [RH, Score=95.1, Expect=5e-22]} {Dmel: FBgn0032014, CG7840, [RH, Score=104, Expect=9e-26]} {Celegans: WBGene00007102, B0024.13, Polyprenol reductase, [RH, Score=94.7, Expect=3e-22]} {RNA1509_19631} {RNA1310_28529.1} {RNA815_21414}
6. MligTC455_43645 1408 29.34 Mlig455_003452, Mlig455_030678

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.110/0.04713

 PAPOLG 0.952 - - - - 0.952 -

Mlig455_003452 {REF} {Length: 2907} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=327.0]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=498, Expect=5e-168]; ENSG00000090060, PAPOLA, poly(A) polymerase alpha, [RH, Score=474, Expect=5e-159]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=494, Expect=6e-167]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=475, Expect=2e-159]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=466, Expect=8e-155]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=385, Expect=1e-125]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=396, Expect=6e-132]} {RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1310_6027, RNA1509_24886, RNA1509_27319, RNA1509_5210} {RNA1509_24886, RNA1509_27319, RNA1509_5210, RNA815_1803.1}

Mlig455_030678 {REF} {Length: 2904} {TRANSSPLICED} {Pfam: Poly(A) polymerase central domain [PF04928.19, score=326.5]; Poly(A) polymerase predicted RNA binding domain [PF04926.17, score=70.3]; Nucleotidyltransferase domain [PF01909.25, score=28.8]} {Human: ENSG00000115421, PAPOLG, poly(A) polymerase gamma, [RH, Score=494, Expect=7e-167]} {Mouse: ENSMUSG00000020273, Papolg, poly(A) polymerase gamma, [RH, Score=491, Expect=8e-166]; ENSMUSG00000021111, Papola, poly (A) polymerase alpha, [RH, Score=468, Expect=1e-156]} {Dmel: FBgn0015949, hrg, hiiragi, [RH, Score=460, Expect=9e-153]} {Celegans: WBGene00012528, pap-1, Poly-A Polymerase, [RH, Score=386, Expect=2e-126]} {Smed: dd_Smed_v6_3033_0_1, dd_Smed_v6_3033_0_1, [RH, Score=393, Expect=1e-130]} {RNA1509_5210} {RNA1310_6027} {RNA815_1803.1}
7. MligTC455_34630 532 11.09 Mlig455_038887

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.299

 TRAIP 0.951 - - - - - 0.951 Mlig455_038887 {REF} {Length: 1551} {Pfam: Ring finger domain [PF13639.8, score=49.7]; RING-H2 zinc finger domain [PF12678.9, score=35.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.1]; zinc-RING finger domain [PF14634.8, score=30.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.2]; RING-like zinc finger [PF17123.7, score=27.6]; Prokaryotic RING finger family 4 [PF14447.8, score=25.2]; RING-type zinc-finger [PF13445.8, score=23.5]; Zinc-ribbon, C4HC2 type [PF17120.7, score=22.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.9]} {Human: ENSG00000183763, TRAIP, TRAF interacting protein, [RH, Score=63.9, Expect=7e-12]} {Mouse: ENSMUSG00000032586, Traip, TRAF-interacting protein, [RH, Score=60.1, Expect=1e-09]} {Dmel: FBgn0034314, nopo, no poles, [RH, Score=62.4, Expect=1e-10]} {Celegans: WBGene00004768, sel-11, E3 ubiquitin-protein ligase hrd-1, [Score=57.0, Expect=8e-09]} {Smed: dd_Smed_v6_15562_0_1, dd_Smed_v6_15562_0_1, [Score=55.8, Expect=8e-09]} {RNA1509_35680} {RNA1310_19972.1, RNA1509_35680} {RNA1509_35680, RNA815_11021.1}

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