TomoSeq data search

Data search

Results for MligTC455_40516

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40516

4828

100.59

Mlig455_002850

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.373

RPL7

Mlig455_002850 {REF} {Length: 1055} {TRANSSPLICED} {Pfam: Ribosomal protein L30p/L7e [PF00327.22, score=21.9]; Ribosomal L30 N-terminal domain [PF08079.14, score=20.2]} {Human: ENSG00000147604, RPL7, ribosomal protein L7, [Score=139, Expect=2e-39]} {Mouse: ENSMUSG00000043716, Rpl7, ribosomal protein L7, [Score=134, Expect=3e-37]} {Dmel: FBgn0005593, RpL7, Ribosomal protein L7, [Score=137, Expect=9e-39]} {Celegans: WBGene00004418, rpl-7, 60S ribosomal protein L7, [Score=162, Expect=1e-48]} {Smed: dd_Smed_v6_276_0_1, dd_Smed_v6_276_0_1, [Score=131, Expect=7e-37]} {RNA1509_11698, RNA1509_2061} {RNA1310_33534, RNA1509_11698, RNA1509_2061} {RNA1509_11698, RNA1509_2061, RNA815_15690}

Cumulative graph for MligTC455_40516

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.121	6.763	0.03385	0.46208
RegionR2	-0.395	6.763	0.24461	0.62119
RegionR3	0.332	6.763	0.24284	0.78528
RegionR4	0.626	6.763	0.05161	0.19701
RegionR5	0.603	6.763	0.02624	0.11773
RegionR6	0.378	6.763	0.18385	0.74836
RegionR7	0.069	6.763	0.82057	1.00000
RegionR8	-0.49	6.763	0.16732	0.73925

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.085	6.763	0.16436	0.90668
RegenerationR2	-0.325	6.763	0.36156	0.79002
RegenerationR3	-0.222	6.763	0.53734	0.87574
RegenerationR4	-0.052	6.763	0.88947	1.00000
RegenerationR5	-0.855	6.763	0.01547	0.21682
RegenerationR6	-0.291	6.763	0.42095	0.75182
RegenerationBL	-0.371	6.763	0.27417	0.63416
RegenerationTP	0.253	6.763	0.47765	0.88608

Genes with expression patterns similar to MligTC455_40516

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40516	4828	100.59	Mlig455_002850	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.373	RPL7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002850 {REF} {Length: 1055} {TRANSSPLICED} {Pfam: Ribosomal protein L30p/L7e [PF00327.22, score=21.9]; Ribosomal L30 N-terminal domain [PF08079.14, score=20.2]} {Human: ENSG00000147604, RPL7, ribosomal protein L7, [Score=139, Expect=2e-39]} {Mouse: ENSMUSG00000043716, Rpl7, ribosomal protein L7, [Score=134, Expect=3e-37]} {Dmel: FBgn0005593, RpL7, Ribosomal protein L7, [Score=137, Expect=9e-39]} {Celegans: WBGene00004418, rpl-7, 60S ribosomal protein L7, [Score=162, Expect=1e-48]} {Smed: dd_Smed_v6_276_0_1, dd_Smed_v6_276_0_1, [Score=131, Expect=7e-37]} {RNA1509_11698, RNA1509_2061} {RNA1310_33534, RNA1509_11698, RNA1509_2061} {RNA1509_11698, RNA1509_2061, RNA815_15690}
2.	MligTC455_30185	7960	165.83	Mlig455_046355	Neo: Int S/G2/M Age: -	RPL5	1.758	-	-	-	0.952	-	0.806	Mlig455_046355 {REF} {Length: 1085} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=292.2]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=379, Expect=3e-132]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=363, Expect=2e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=395, Expect=6e-139]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=324, Expect=4e-111]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=341, Expect=4e-118]} {RNA1509_10191, RNA1509_24181, RNA1509_3149} {RNA1310_31746.1, RNA1509_10191, RNA1509_24181, RNA1509_3149} {RNA1509_10191, RNA1509_24181, RNA1509_3149, RNA815_10534.1}
3.	MligTC455_30385	602	12.55	Mlig455_070662	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.168	TRAF6	0.975	-	-	-	-	0.975	-	Mlig455_070662 {REF} {Length: 2740} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=44.6]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=23.7]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=96.3, Expect=5e-21]} {Mouse: ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=92.4, Expect=6e-20]} {Smed: dd_Smed_v6_4392_0_1, dd_Smed_v6_4392_0_1, [Score=92.8, Expect=2e-20]} {RNA1509_36404} {RNA1310_37521} {RNA815_9291}
4.	MligTC455_39911	931	19.39	Mlig455_005763	Neo: - Age: -	IST1	0.956	-	-	-	-	0.956	-	Mlig455_005763 {REF} {Length: 2417} {Pfam: Regulator of Vps4 activity in the MVB pathway [PF03398.16, score=201.4]} {Human: ENSG00000182149, IST1, IST1, ESCRT-III associated factor, [RH, Score=296, Expect=2e-98]} {Mouse: ENSMUSG00000031729, Ist1, increased sodium tolerance 1 homolog (yeast), [RH, Score=295, Expect=1e-97]} {Dmel: FBgn0035715, CG10103, [RH, Score=295, Expect=1e-97]} {Celegans: WBGene00010736, istr-1, Increased Sodium Tolerance Related, [RH, Score=257, Expect=3e-82]} {Smed: dd_Smed_v6_2006_0_1, dd_Smed_v6_2006_0_1, [RH, Score=286, Expect=2e-95]} {RNA1509_14467, RNA1509_4021, RNA1509_50056} {RNA1310_50949.1, RNA1509_14467, RNA1509_4021, RNA1509_50056} {RNA1509_14467, RNA1509_4021, RNA1509_50056, RNA815_14394.1}
5.	MligTC455_51004	473	9.85	Mlig455_066080	Neo: - Age: Down-Up-Down Region-enriched R4: 1.861/0.01541		0.953	-	-	-	-	0.953	-	Mlig455_066080 {REF} {Length: 2334} {RNA1509_9951} {RNA1310_20859} {RNA815_25273.1}

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