Data search
Results for MligTC455_40588
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40588 | 91 | 1.89 | Mlig455_064214 | Neo: - Age: - |
Mlig455_064214 {REF} {Length: 2421} {Pfam: SDA1 [PF05285.14, score=26.2]; YL1 nuclear protein [PF05764.15, score=24.1]; M-phase phosphoprotein 6 [PF10175.11, score=20.6]; CDC45-like protein [PF02724.16, score=19.5]; Sigma-70, non-essential region [PF04546.15, score=18.7]; Nop14-like family [PF04147.14, score=17.3]} {RNA1509_34689, RNA1509_45142, RNA1509_59390} {RNA1310_74140, RNA1509_34689, RNA1509_45142, RNA1509_59390} {RNA1509_34689, RNA1509_45142, RNA1509_59390, RNA815_5823} |
Cumulative graph for MligTC455_40588
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.22 | 1.927 | 0.99969 | 1.00000 | |
| RegionR2 | 0.704 | 1.927 | 0.56031 | 0.92265 | |
| RegionR3 | 0.722 | 1.927 | 0.51748 | 1.00000 | |
| RegionR4 | 0.757 | 1.927 | 0.54030 | 0.86283 | |
| RegionR5 | 1.531 | 1.927 | 0.16230 | 0.42517 | |
| RegionR6 | -0.261 | 1.927 | 0.83273 | 1.00000 | |
| RegionR7 | 2.131 | 1.927 | 0.12050 | 0.65619 | |
| RegionR8 | -3.363 | 1.927 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.787 | 1.927 | 0.99986 | 1.00000 | |
| RegenerationR2 | -0.532 | 1.927 | 0.52146 | 0.87947 | |
| RegenerationR3 | -0.003 | 1.927 | 0.97699 | 1.00000 | |
| RegenerationR4 | 0.909 | 1.927 | 0.38021 | 0.80100 | |
| RegenerationR5 | -0.432 | 1.927 | 0.57274 | 0.89692 | |
| RegenerationR6 | 1.448 | 1.927 | 0.15225 | 0.47798 | |
| RegenerationBL | 1.366 | 1.927 | 0.41135 | 0.78082 | |
| RegenerationTP | 0.991 | 1.927 | 0.61025 | 0.96673 |
Genes with expression patterns similar to MligTC455_40588
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40588 | 91 | 1.89 | Mlig455_064214 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064214 {REF} {Length: 2421} {Pfam: SDA1 [PF05285.14, score=26.2]; YL1 nuclear protein [PF05764.15, score=24.1]; M-phase phosphoprotein 6 [PF10175.11, score=20.6]; CDC45-like protein [PF02724.16, score=19.5]; Sigma-70, non-essential region [PF04546.15, score=18.7]; Nop14-like family [PF04147.14, score=17.3]} {RNA1509_34689, RNA1509_45142, RNA1509_59390} {RNA1310_74140, RNA1509_34689, RNA1509_45142, RNA1509_59390} {RNA1509_34689, RNA1509_45142, RNA1509_59390, RNA815_5823} | |
| 2. | MligTC455_44652 | 28 | 0.58 | Mlig455_024211 | Neo: - Age: - Region-enriched R2: 6.750/0.00858 Regeneration-downregulated R2: -6.764 Regeneration-depleted R2: -6.764 |
NPFFR2 | 1.66 | 0.955 | 0.705 | - | - | - | - | Mlig455_024211 {REF} {Length: 2684} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=160.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=50.7]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=155, Expect=2e-42]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=152, Expect=2e-41]; ENSMUSG00000032360, Hcrtr2, hypocretin (orexin) receptor 2, [Score=145, Expect=1e-38]} {Dmel: FBgn0038880, SIFaR, SIFamide receptor, [Score=188, Expect=1e-52]} {Celegans: WBGene00016842, npr-35, NeuroPeptide Receptor family, [Score=124, Expect=1e-31]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=218, Expect=3e-67]} {RNA1310_39672} |
| 3. | MligTC455_23169 | 46 | 0.95 | Mlig455_005004 | Neo: - Age: - |
RILPL1 | 0.982 | - | 0.982 | - | - | - | - | Mlig455_005004 {REF} {Length: 3694} {TRANSSPLICED} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=120.9]; Rab interacting lysosomal protein [PF11461.10, score=44.5]; Bap31/Bap29 cytoplasmic coiled-coil domain [PF18035.3, score=21.9]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.8]} {Human: ENSG00000188026, RILPL1, Rab interacting lysosomal protein like 1, [RH, Score=183, Expect=2e-53]} {Mouse: ENSMUSG00000029392, Rilpl1, Rab interacting lysosomal protein-like 1, [RH, Score=195, Expect=5e-58]} {Dmel: FBgn0024985, CG11448, [RH, Score=198, Expect=4e-59]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [RH, Score=182, Expect=2e-53]} {Smed: dd_Smed_v6_4713_0_1, dd_Smed_v6_4713_0_1, [RH, Score=327, Expect=1e-109]} {RNA1509_53467} {RNA1310_21261.1} {RNA815_5321.1} |
| 4. | MligTC455_12802 | 283 | 5.91 | Mlig455_046175 | Neo: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_046175 {REF} {Length: 1391} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=19.6]} {RNA1509_38577} {RNA1310_26379.1} {RNA815_34976.2} | |
| 5. | MligTC455_51387 | 301 | 6.27 | Mlig455_041337, Mlig455_056224 | Neo: Irradiation Age: Up-Down-Down |
0.961 | - | - | - | 0.961 | - | - | Mlig455_041337 {REF} {Length: 3729} {TRANSSPLICED} {RNA1509_34326, RNA1509_54833} {RNA1310_25018.1, RNA1509_34326, RNA1509_54833} {RNA1509_34326, RNA1509_54833, RNA815_29663} Mlig455_056224 {REF} {Length: 3928} {TRANSSPLICED} {RNA1509_34326} {RNA1310_25018.1} {RNA815_29663} |
|
| 6. | MligTC455_40050 | 173 | 3.61 | Mlig455_058896 | Neo: Int S/G2/M Age: Up-Down-Down |
PBRM1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_058896 {REF} {Length: 5141} {Pfam: Bromodomain [PF00439.27, score=152.2]; BAH domain [PF01426.20, score=101.7]; HMG (high mobility group) box [PF00505.21, score=47.0]; HMG-box domain [PF09011.12, score=37.9]} {Human: ENSG00000163939, PBRM1, polybromo 1, [RH, Score=514, Expect=7e-157]} {Mouse: ENSMUSG00000042323, Pbrm1, polybromo 1, [RH, Score=513, Expect=3e-156]} {Dmel: FBgn0039227, polybromo, [RH, Score=412, Expect=1e-120]} {Celegans: WBGene00007042, pbrm-1, PolyBRoMo domain containing, [RH, Score=331, Expect=6e-93]} {Smed: dd_Smed_v6_4218_0_1, dd_Smed_v6_4218_0_1, [Score=670, Expect=0.0]} {RNA1509_5406} {RNA1310_918.1} {RNA815_609.1} |
| 7. | MligTC455_24710 | 602 | 12.55 | Mlig455_005252 | Neo: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_005252 {REF} {Length: 971} {TRANSSPLICED} {Pfam: Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) [PF05793.14, score=19.9]; Protein of unknown function (DUF3752) [PF12572.10, score=19.9]} {RNA1509_13180} {RNA1310_33597.1} {RNA815_34409} | |
| 8. | MligTC455_16458 | 823 | 17.15 | Mlig455_033645 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.093/0.00453 |
0.955 | 0.955 | - | - | - | - | - | Mlig455_033645 {REF} {Length: 1982} {TRANSSPLICED} {Dmel: FBgn0033813, fsd, fates-shifted, [RH, Score=49.3, Expect=3e-06]} {RNA1509_32417, RNA1509_8500} {RNA1310_16518.1, RNA1509_32417} {RNA1509_32417, RNA815_7544} |
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