TomoSeq data search

Data search

Results for MligTC455_40646

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40646	241	5.02	Mlig455_018986	Neo: - Age: Down-Up-Up	TOR1B	Mlig455_018986 {REF} {Length: 1780} {Pfam: Torsin [PF06309.13, score=111.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.6]; AAA domain [PF13401.8, score=19.6]} {Human: ENSG00000136816, TOR1B, torsin family 1 member B, [Score=176, Expect=2e-51]; ENSG00000136827, TOR1A, torsin family 1 member A, [Score=175, Expect=2e-51]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [Score=176, Expect=1e-51]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [Score=176, Expect=8e-52]} {Dmel: FBgn0025615, Torsin, [Score=132, Expect=2e-35]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=186, Expect=1e-55]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=152, Expect=4e-43]} {RNA1509_20868} {RNA1310_9112.1} {RNA815_7575}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40646

241

5.02

Mlig455_018986

Neo: -

Age: Down-Up-Up

TOR1B

Mlig455_018986 {REF} {Length: 1780} {Pfam: Torsin [PF06309.13, score=111.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.6]; AAA domain [PF13401.8, score=19.6]} {Human: ENSG00000136816, TOR1B, torsin family 1 member B, [Score=176, Expect=2e-51]; ENSG00000136827, TOR1A, torsin family 1 member A, [Score=175, Expect=2e-51]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [Score=176, Expect=1e-51]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [Score=176, Expect=8e-52]} {Dmel: FBgn0025615, Torsin, [Score=132, Expect=2e-35]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=186, Expect=1e-55]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=152, Expect=4e-43]} {RNA1509_20868} {RNA1310_9112.1} {RNA815_7575}

Cumulative graph for MligTC455_40646

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.012	2.931	0.49229	1.00000
RegionR2	0.835	2.931	0.23993	0.61453
RegionR3	1.407	2.931	0.00298	0.06633
RegionR4	-0.753	2.931	0.24192	0.53923
RegionR5	0.108	2.931	0.81440	1.00000
RegionR6	0.675	2.931	0.19256	0.76037
RegionR7	-0.212	2.931	0.76465	1.00000
RegionR8	-1.049	2.931	0.29831	0.92814

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.953	2.931	0.51015	1.00000
RegenerationR2	0.172	2.931	0.77102	0.98072
RegenerationR3	-0.471	2.931	0.44222	0.82835
RegenerationR4	0.52	2.931	0.43460	0.83317
RegenerationR5	-0.781	2.931	0.19275	0.62425
RegenerationR6	-0.15	2.931	0.82842	0.99016
RegenerationBL	0.836	2.931	0.35201	0.71964
RegenerationTP	0.73	2.931	0.45977	0.87384

Genes with expression patterns similar to MligTC455_40646

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40646	241	5.02	Mlig455_018986	Neo: - Age: Down-Up-Up	TOR1B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018986 {REF} {Length: 1780} {Pfam: Torsin [PF06309.13, score=111.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.4]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.6]; AAA domain [PF13401.8, score=19.6]} {Human: ENSG00000136816, TOR1B, torsin family 1 member B, [Score=176, Expect=2e-51]; ENSG00000136827, TOR1A, torsin family 1 member A, [Score=175, Expect=2e-51]} {Mouse: ENSMUSG00000026848, Tor1b, torsin family 1, member B, [Score=176, Expect=1e-51]; ENSMUSG00000026849, Tor1a, torsin family 1, member A (torsin A), [Score=176, Expect=8e-52]} {Dmel: FBgn0025615, Torsin, [Score=132, Expect=2e-35]} {Celegans: WBGene00003870, ooc-5, Torsin-like protein, [Score=186, Expect=1e-55]} {Smed: dd_Smed_v6_7561_0_1, dd_Smed_v6_7561_0_1, [Score=152, Expect=4e-43]} {RNA1509_20868} {RNA1310_9112.1} {RNA815_7575}
2.	MligTC455_37213	82	1.71	Mlig455_035489	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_035489 {REF} {Length: 3502} {RNA1509_42371} {RNA1310_12088.1} {RNA815_3483}
3.	MligTC455_21640	262	5.46	Mlig455_052657	Neo: - Age: -	SLC6A5	0.959	-	-	-	-	0.959	-	Mlig455_052657 {REF} {Length: 4833} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=583.6]; BTB/POZ domain [PF00651.33, score=59.5]; BTB And C-terminal Kelch [PF07707.17, score=44.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=24.7]; Protein of unknown function (DUF2722) [PF10846.10, score=18.1]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=316, Expect=2e-92]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=315, Expect=5e-92]} {Dmel: FBgn0034911, CG5549, [Score=313, Expect=5e-89]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=228, Expect=2e-63]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=273, Expect=1e-78]} {RNA1509_27437} {RNA1310_7302.1} {RNA815_3821}
4.	MligTC455_32444	279	5.81	Mlig455_063483	Neo: - Age: -	MANBA	0.957	-	-	-	0.957	-	-	Mlig455_063483 {REF} {Length: 3695} {Pfam: Glycosyl hydrolases family 2 [PF00703.23, score=22.7]; Glycosyl hydrolases family 2, sugar binding domain [PF02837.20, score=20.4]} {Human: ENSG00000109323, MANBA, mannosidase beta, [RH, Score=462, Expect=2e-147]} {Mouse: ENSMUSG00000028164, Manba, mannosidase, beta A, lysosomal, [RH, Score=466, Expect=2e-149]} {Dmel: FBgn0037215, beta-Man, beta-Mannosidase, [RH, Score=377, Expect=1e-115]} {Celegans: WBGene00007904, C33G3.4, Probable beta-mannosidase, [RH, Score=396, Expect=5e-123]} {Smed: dd_Smed_v6_3209_0_1, dd_Smed_v6_3209_0_1, [RH, Score=368, Expect=2e-112]} {RNA1509_27646, RNA1509_41233} {RNA1310_1571.1, RNA1509_27646, RNA1509_41233} {RNA1509_27646, RNA1509_41233, RNA815_798.1}