M. lignano Tomo-Seq
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Results for MligTC455_40710

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40710 320 6.68 Mlig455_069026

Neo: -

Age: -

 APBB2 Mlig455_069026 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=42.3]} {Human: ENSG00000163697, APBB2, amyloid beta precursor protein binding family B member 2, [RH, Score=163, Expect=2e-41]} {Mouse: ENSMUSG00000029207, Apbb2, amyloid beta (A4) precursor protein-binding, family B, member 2, [RH, Score=163, Expect=1e-41]} {Celegans: WBGene00001410, feh-1, Protein Fe65 homolog, [Score=160, Expect=8e-42]} {RNA1509_23921} {RNA1310_8806} {RNA815_19651}

Cumulative graph for MligTC455_40710

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.46 3.228 1.00000 1.00000
RegionR2 2.091 3.228 0.03688 0.22192
RegionR3 0.79 3.228 0.43168 0.95135
RegionR4 0.695 3.228 0.48457 0.81201
RegionR5 1.371 3.228 0.14479 0.39367
RegionR6 1.439 3.228 0.14377 0.67905
RegionR7 2.76 3.228 0.00364 0.08785
RegionR8 -4.687 3.228 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.174 3.228 0.99990 1.00000
RegenerationR2 0.256 3.228 0.57640 0.90517
RegenerationR3 0.353 3.228 0.55347 0.88563
RegenerationR4 0.151 3.228 0.79807 0.98561
RegenerationR5 0.487 3.228 0.31395 0.73901
RegenerationR6 -0.074 3.228 0.89257 1.00000
RegenerationBL 2.433 3.228 0.03102 0.19691
RegenerationTP 2.859 3.228 0.08305 0.45692


Genes with expression patterns similar to MligTC455_40710

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40710 320 6.68 Mlig455_069026

Neo: -

Age: -

 APBB2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069026 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=42.3]} {Human: ENSG00000163697, APBB2, amyloid beta precursor protein binding family B member 2, [RH, Score=163, Expect=2e-41]} {Mouse: ENSMUSG00000029207, Apbb2, amyloid beta (A4) precursor protein-binding, family B, member 2, [RH, Score=163, Expect=1e-41]} {Celegans: WBGene00001410, feh-1, Protein Fe65 homolog, [Score=160, Expect=8e-42]} {RNA1509_23921} {RNA1310_8806} {RNA815_19651}
2. MligTC455_53092 129 2.68 Mlig455_062642

Neo: -

Age: -

 SPATA1 0.97 - - - - 0.970 - Mlig455_062642 {REF} {Length: 4411} {Pfam: Spermatogenesis-associated C-terminus [PF15743.7, score=137.7]} {Human: ENSG00000122432, SPATA1, spermatogenesis associated 1, [Score=103, Expect=2e-22]} {Mouse: ENSMUSG00000028188, Spata1, spermatogenesis associated 1, [Score=103, Expect=6e-23]} {Smed: dd_Smed_v6_15381_0_1, dd_Smed_v6_15381_0_1, [RH, Score=174, Expect=1e-46]} {RNA1509_56521} {RNA1310_8534} {RNA815_3401.1}
3. MligTC455_41181 708 14.76 Mlig455_049760

Neo: -

Age: logFC(26M/2M)=-0.377

Region-enriched R2: 2.010/0.02984

 AK5 0.952 - - - - 0.952 - Mlig455_049760 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=105.1]; AAA domain [PF13207.8, score=87.6]; AAA domain [PF13238.8, score=49.8]; AAA domain [PF13671.8, score=35.6]; IQ calmodulin-binding motif [PF00612.29, score=33.6]; AAA ATPase domain [PF13191.8, score=29.8]; AAA domain [PF13521.8, score=22.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.4]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000154027, AK5, adenylate kinase 5, [RH, Score=223, Expect=6e-64]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [RH, Score=222, Expect=1e-63]} {Dmel: FBgn0032083, CG9541, [RH, Score=109, Expect=1e-24]} {Celegans: WBGene00008746, F13E6.2, [Score=126, Expect=7e-30]} {Smed: dd_Smed_v6_5119_0_1, dd_Smed_v6_5119_0_1, [RH, Score=266, Expect=1e-77]} {RNA1509_14765, RNA1509_30132} {RNA1310_6179.1, RNA1509_14765, RNA1509_30132} {RNA1509_14765, RNA1509_30132, RNA815_3037}
4. MligTC455_21032 654 13.63 Mlig455_054554, Mlig455_066337

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_054554 {REF} {Length: 652} {NoTransDecoderORF} {RNA1509_36765} {RNA1310_8260.1} {RNA815_20588}

Mlig455_066337 {REF} {Length: 463} {NoTransDecoderORF} {RNA1509_36765} {RNA1310_8260.1} {RNA815_20588}

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