Data search


search
Exact
Search

Results for MligTC455_40731

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40731 331 6.89 Mlig455_039637

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.385

MVK Mlig455_039637 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: GHMP kinases N terminal domain [PF00288.28, score=53.7]; GHMP kinases C terminal [PF08544.15, score=31.7]} {Human: ENSG00000110921, MVK, mevalonate kinase, [RH, Score=130, Expect=4e-33]} {Mouse: ENSMUSG00000041939, Mvk, mevalonate kinase, [RH, Score=119, Expect=3e-29]} {Dmel: FBgn0061359, CG33671, [RH, Score=113, Expect=2e-27]} {Celegans: WBGene00021534, mvk-1, MeValonate Kinase, [RH, Score=70.1, Expect=8e-13]} {Smed: dd_Smed_v6_5154_0_1, dd_Smed_v6_5154_0_1, [RH, Score=110, Expect=7e-27]} {RNA1509_47139} {RNA1310_20200.1, RNA1509_47139} {RNA1509_47139, RNA815_28411}

Cumulative graph for MligTC455_40731

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.583 3.374 0.07749 0.61232
RegionR2 -0.321 3.374 0.93077 1.00000
RegionR3 0.271 3.374 0.72800 1.00000
RegionR4 1.612 3.374 0.05183 0.19754
RegionR5 1.491 3.374 0.02746 0.12156
RegionR6 1.201 3.374 0.12787 0.64829
RegionR7 1.251 3.374 0.16205 0.74369
RegionR8 1.077 3.374 0.31680 0.94967

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.36 3.374 0.99997 1.00000
RegenerationR2 -0.095 3.374 0.87230 1.00000
RegenerationR3 -0.24 3.374 0.68879 0.94379
RegenerationR4 -1.177 3.374 0.05276 0.36920
RegenerationR5 -0.724 3.374 0.16209 0.58637
RegenerationR6 -0.326 3.374 0.55591 0.84269
RegenerationBL -2.192 3.374 0.00900 0.09430
RegenerationTP -1.368 3.374 0.08596 0.46347


Genes with expression patterns similar to MligTC455_40731

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40731 331 6.89 Mlig455_039637

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.385

MVK 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039637 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: GHMP kinases N terminal domain [PF00288.28, score=53.7]; GHMP kinases C terminal [PF08544.15, score=31.7]} {Human: ENSG00000110921, MVK, mevalonate kinase, [RH, Score=130, Expect=4e-33]} {Mouse: ENSMUSG00000041939, Mvk, mevalonate kinase, [RH, Score=119, Expect=3e-29]} {Dmel: FBgn0061359, CG33671, [RH, Score=113, Expect=2e-27]} {Celegans: WBGene00021534, mvk-1, MeValonate Kinase, [RH, Score=70.1, Expect=8e-13]} {Smed: dd_Smed_v6_5154_0_1, dd_Smed_v6_5154_0_1, [RH, Score=110, Expect=7e-27]} {RNA1509_47139} {RNA1310_20200.1, RNA1509_47139} {RNA1509_47139, RNA815_28411}
2. MligTC455_39221 503 10.48 Mlig455_020663, Mlig455_059250

Neo: -

Age: Up-Down-Down

SCMH1 0.992 - - - - 0.992 -

Mlig455_020663 {REF} {Length: 5069} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=130.0]; SAM domain (Sterile alpha motif) [PF00536.32, score=55.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=33.9]} {Human: ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [Score=258, Expect=2e-76]; ENSG00000102098, SCML2, Scm polycomb group protein like 2, [Score=249, Expect=1e-72]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [Score=258, Expect=3e-76]; ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [Score=247, Expect=5e-71]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [Score=250, Expect=4e-72]} {Celegans: WBGene00003041, lin-61, [Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [Score=181, Expect=2e-49]} {RNA1509_19982, RNA1509_49087, RNA1509_51964, RNA1509_51976, RNA1509_53127} {RNA1310_4945.1, RNA1509_19982, RNA1509_49087, RNA1509_51964, RNA1509_51976, RNA1509_53127} {RNA1509_19982, RNA1509_49087, RNA1509_51964, RNA1509_51976, RNA1509_53127, RNA815_6958}

Mlig455_059250 {REF} {Length: 4942} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=130.0]; SAM domain (Sterile alpha motif) [PF00536.32, score=55.1]; SAM domain (Sterile alpha motif) [PF07647.19, score=33.9]} {Human: ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [Score=256, Expect=2e-75]; ENSG00000102098, SCML2, Scm polycomb group protein like 2, [Score=249, Expect=2e-72]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [Score=255, Expect=3e-75]; ENSMUSG00000000037, Scml2, Scm polycomb group protein like 2, [Score=246, Expect=7e-71]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [Score=252, Expect=1e-72]} {Celegans: WBGene00003041, lin-61, [Score=91.7, Expect=3e-19]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [Score=177, Expect=4e-48]} {RNA1509_19982} {RNA1310_4945.1} {RNA815_6958}
3. MligTC455_45455 1171 24.39 Mlig455_028595, Mlig455_028612, Mlig455_028632, Mlig455_056925

Neo: Int S/G2/M

Age: -

BOP1 0.959 - - - - 0.959 -

Mlig455_028595 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_17129} {RNA1310_82520} {RNA815_46682}

Mlig455_028612 {REF} {Length: 3936} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=319.2]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=6e-94]} {RNA1509_7833} {RNA1310_11209.1, RNA1509_7833} {RNA1509_7833, RNA815_3705}

Mlig455_028632 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=318.7]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=3e-94]} {RNA1509_7833} {RNA1310_11209.1} {RNA815_3705}

Mlig455_056925 {REF} {Length: 1071} {RNA1509_17129} {RNA1310_82520} {RNA815_46682}
4. MligTC455_52226 225 4.69 Mlig455_053937

Neo: -

Age: -

Region-enriched R5: 2.393/0.01173

MAPK10 0.952 - - - - 0.952 - Mlig455_053937 {REF} {Length: 2616} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=202.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=98.6]; ABC1 atypical kinase-like domain [PF03109.18, score=23.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.1]} {Human: ENSG00000109339, MAPK10, mitogen-activated protein kinase 10, [RH, Score=587, Expect=0.0]; ENSG00000107643, MAPK8, mitogen-activated protein kinase 8, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000046709, Mapk10, mitogen-activated protein kinase 10, [RH, Score=587, Expect=0.0]; ENSMUSG00000021936, Mapk8, mitogen-activated protein kinase 8, [RH, Score=581, Expect=0.0]} {Dmel: FBgn0000229, bsk, basket, [RH, Score=578, Expect=0.0]} {Celegans: WBGene00002178, jnk-1, Stress-activated protein kinase jnk-1, [RH, Score=545, Expect=0.0]} {Smed: dd_Smed_v6_5924_0_1, dd_Smed_v6_5924_0_1, [RH, Score=557, Expect=0.0]} {RNA1509_32566} {RNA1310_10146} {RNA815_12041}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA