Data search


search
Exact
Search

Results for MligTC455_40733

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40733 962 20.05 Mlig455_045323

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.310

Region-enriched R4: 2.304/0.00239
Region-enriched R5: 2.207/0.00035

Mlig455_045323 {REF} {Length: 677} {TRANSSPLICED} {Pfam: Cytochrome oxidase complex assembly protein 1 [PF08695.12, score=25.3]} {RNA1509_19652} {RNA1310_52723, RNA1509_19652} {RNA1509_19652, RNA815_28193}

Cumulative graph for MligTC455_40733

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.43 4.618 0.00145 0.12622
RegionR2 0.263 4.618 0.72679 1.00000
RegionR3 1.41 4.618 0.02485 0.26951
RegionR4 2.304 4.618 0.00016 0.00239
RegionR5 2.207 4.618 0.00002 0.00035
RegionR6 1.418 4.618 0.02720 0.30309
RegionR7 0.51 4.618 0.57108 1.00000
RegionR8 0.318 4.618 0.71113 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.247 4.618 1.00000 1.00000
RegenerationR2 -0.419 4.618 0.31290 0.75240
RegenerationR3 -0.273 4.618 0.51287 0.86317
RegenerationR4 -0.05 4.618 0.90609 1.00000
RegenerationR5 -0.343 4.618 0.38848 0.79059
RegenerationR6 -0.411 4.618 0.34431 0.68966
RegenerationBL 0.131 4.618 0.77880 1.00000
RegenerationTP 0.416 4.618 0.43251 0.85521


Genes with expression patterns similar to MligTC455_40733

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40733 962 20.05 Mlig455_045323

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.310

Region-enriched R4: 2.304/0.00239
Region-enriched R5: 2.207/0.00035

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045323 {REF} {Length: 677} {TRANSSPLICED} {Pfam: Cytochrome oxidase complex assembly protein 1 [PF08695.12, score=25.3]} {RNA1509_19652} {RNA1310_52723, RNA1509_19652} {RNA1509_19652, RNA815_28193}
2. MligTC455_42110 2111 43.98 Mlig455_003488

Neo: -

Age: -

PRDX4 1.702 - 0.729 - - 0.973 - Mlig455_003488 {REF} {Length: 1973} {Pfam: AhpC/TSA family [PF00578.23, score=125.2]; Redoxin [PF08534.12, score=53.1]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=51.1]} {Human: ENSG00000123131, PRDX4, peroxiredoxin 4, [Score=323, Expect=2e-112]} {Mouse: ENSMUSG00000025289, Prdx4, peroxiredoxin 4, [Score=324, Expect=4e-113]} {Dmel: FBgn0040308, Jafrac2, Thioredoxin peroxidase 2, [Score=317, Expect=8e-111]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [Score=266, Expect=1e-91]} {Smed: dd_Smed_v6_3414_0_1, dd_Smed_v6_3414_0_1, [Score=322, Expect=1e-112]} {RNA1509_16873} {RNA1310_13724} {RNA815_4645.1}
3. MligTC455_44131 2238 46.63 Mlig455_008740, Mlig455_008756

Neo: -

Age: logFC(26M/2M)=0.231

BPHL 1.685 0.720 - - 0.965 - -

Mlig455_008740 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=74.8]; Alpha/beta hydrolase family [PF12697.9, score=61.2]; Serine aminopeptidase, S33 [PF12146.10, score=55.0]; TAP-like protein [PF08386.12, score=23.7]} {Human: ENSG00000137274, BPHL, biphenyl hydrolase like, [RH, Score=233, Expect=5e-76]} {Mouse: ENSMUSG00000038286, Bphl, biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen), [RH, Score=224, Expect=2e-72]} {Dmel: FBgn0038974, CG5377, [RH, Score=202, Expect=2e-64]} {Celegans: WBGene00019280, K01A2.5, [RH, Score=106, Expect=2e-27]} {RNA1509_36267} {RNA1310_32073} {RNA815_14961}

Mlig455_008756 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=74.8]; Alpha/beta hydrolase family [PF12697.9, score=61.2]; Serine aminopeptidase, S33 [PF12146.10, score=55.0]; TAP-like protein [PF08386.12, score=23.7]} {Human: ENSG00000137274, BPHL, biphenyl hydrolase like, [RH, Score=233, Expect=5e-76]} {Mouse: ENSMUSG00000038286, Bphl, biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen), [RH, Score=224, Expect=2e-72]} {Dmel: FBgn0038974, CG5377, [RH, Score=202, Expect=2e-64]} {Celegans: WBGene00019280, K01A2.5, [RH, Score=106, Expect=2e-27]} {RNA1509_11876, RNA1509_17663, RNA1509_36267} {RNA1310_32073, RNA1509_11876, RNA1509_17663, RNA1509_36267} {RNA1509_11876, RNA1509_17663, RNA1509_36267, RNA815_14961}
4. MligTC455_54049 1116 23.24 Mlig455_045376

Neo: -

Age: Down-Up-Up

ACOT13 0.964 - - - - - 0.964 Mlig455_045376 {REF} {Length: 611} {TRANSSPLICED} {Pfam: Thioesterase superfamily [PF03061.24, score=61.4]; Thioesterase-like superfamily [PF13622.8, score=26.7]} {Human: ENSG00000112304, ACOT13, acyl-CoA thioesterase 13, [RH, Score=115, Expect=2e-33]} {Mouse: ENSMUSG00000006717, Acot13, acyl-CoA thioesterase 13, [RH, Score=114, Expect=4e-33]} {Dmel: FBgn0035356, CG16986, [RH, Score=93.2, Expect=7e-25]} {Celegans: WBGene00018370, F42H10.6, Putative esterase F42H10.6, [RH, Score=103, Expect=8e-29]} {Smed: dd_Smed_v6_4659_0_1, dd_Smed_v6_4659_0_1, [RH, Score=90.9, Expect=3e-24]} {RNA1509_15116, RNA1509_58145} {RNA1310_58881.1, RNA1509_15116, RNA1509_58145} {RNA1509_15116, RNA1509_58145, RNA815_29736}
5. MligTC455_13951 488 10.17 Mlig455_028300

Neo: Int S/G2/M

Age: -

0.953 - - - 0.953 - - Mlig455_028300 {REF} {Length: 920} {TRANSSPLICED} {Pfam: Ovarian carcinoma immunoreactive antigen (OCIA) [PF07051.13, score=48.0]} {Dmel: FBgn0034793, asrij, [RH, Score=48.9, Expect=8e-07]} {RNA1509_3611} {RNA1310_36785} {RNA815_24791}
6. MligTC455_47728 808 16.83 Mlig455_027519

Neo: Int S/G2/M

Age: -

DHX37 0.953 - - - - - 0.953 Mlig455_027519 {REF} {Length: 3244} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=77.3]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=49.5]; Helicase conserved C-terminal domain [PF00271.33, score=44.8]; DEAD/DEAH box helicase [PF00270.31, score=39.2]; AAA domain [PF13604.8, score=21.4]; AAA domain [PF13245.8, score=20.0]} {Human: ENSG00000150990, DHX37, DEAH-box helicase 37, [RH, Score=617, Expect=0.0]} {Mouse: ENSMUSG00000029480, Dhx37, DEAH (Asp-Glu-Ala-His) box polypeptide 37, [RH, Score=636, Expect=0.0]} {Dmel: FBgn0001330, kz, kurz, [RH, Score=642, Expect=0.0]} {Celegans: WBGene00015525, rha-2, Putative ATP-dependent RNA helicase rha-2, [RH, Score=555, Expect=6e-180]} {Smed: dd_Smed_v6_10340_0_1, dd_Smed_v6_10340_0_1, [RH, Score=594, Expect=0.0]} {RNA1509_10043, RNA1509_25646} {RNA1310_4392, RNA1509_10043, RNA1509_25646} {RNA1509_10043, RNA1509_25646, RNA815_1308.1}
7. MligTC455_42832 1461 30.43 Mlig455_024317, Mlig455_024488

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.326

Regeneration-upregulated BL: 1.723

Regeneration-enriched BL: 1.723

GPKOW 0.952 - - - - - 0.952

Mlig455_024317 {REF} {Length: 1765} {TRANSSPLICED} {Pfam: G-patch domain [PF12656.9, score=49.3]; KOW motif [PF00467.31, score=21.1]} {Human: ENSG00000068394, GPKOW, G-patch domain and KOW motifs, [RH, Score=91.3, Expect=3e-19]} {Mouse: ENSMUSG00000031148, Gpkow, G patch domain and KOW motifs, [RH, Score=87.8, Expect=3e-18]} {Dmel: FBgn0038454, CG10324, [Score=56.6, Expect=3e-08]} {Celegans: WBGene00011237, gkow-1, G patch domain and KOW motifs-containing protein homolog 1, [RH, Score=89.4, Expect=5e-19]} {RNA1509_19504} {RNA1310_9244} {RNA815_26106}

Mlig455_024488 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: G-patch domain [PF12656.9, score=49.3]; KOW motif [PF00467.31, score=20.9]} {Human: ENSG00000068394, GPKOW, G-patch domain and KOW motifs, [RH, Score=90.5, Expect=6e-19]} {Mouse: ENSMUSG00000031148, Gpkow, G patch domain and KOW motifs, [RH, Score=84.3, Expect=4e-17]} {Dmel: FBgn0038454, CG10324, [Score=56.2, Expect=3e-08]} {Celegans: WBGene00011237, gkow-1, G patch domain and KOW motifs-containing protein homolog 1, [RH, Score=83.2, Expect=6e-17]} {RNA1509_19504} {RNA1310_9244} {RNA815_24204}
8. MligTC455_50539 795 16.56 Mlig455_006057

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R4: 1.810/0.04356

0.952 - - - 0.952 - - Mlig455_006057 {REF} {Length: 511} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=37.7]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=43.5, Expect=4e-06]} {RNA1509_58683, RNA1509_7804} {RNA1310_64510.1, RNA1509_58683, RNA1509_7804} {RNA1509_58683, RNA1509_7804, RNA815_30472}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA