M. lignano Tomo-Seq
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Results for MligTC455_40747

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40747 942 19.63 Mlig455_053407

Neo: -

Age: -

 IVD Mlig455_053407 {REF} {Length: 2492} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=137.6]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=135.1]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=100.3]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=32.7]} {Human: ENSG00000128928, IVD, isovaleryl-CoA dehydrogenase, [RH, Score=521, Expect=0.0]} {Mouse: ENSMUSG00000027332, Ivd, isovaleryl coenzyme A dehydrogenase, [RH, Score=536, Expect=0.0]} {Dmel: FBgn0035911, CG6638, [RH, Score=503, Expect=2e-178]} {Celegans: WBGene00015326, ivd-1, IsoValeryl-CoA Dehydrogenase; Isovaleryl-CoA dehydrogenase, [RH, Score=529, Expect=0.0]} {Smed: dd_Smed_v6_6336_0_1, dd_Smed_v6_6336_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_7456} {RNA1310_17394} {RNA815_7536}

Cumulative graph for MligTC455_40747

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.775 4.568 0.32418 0.97293
RegionR2 0.234 4.568 0.53221 0.90342
RegionR3 0.355 4.568 0.22764 0.76899
RegionR4 0.924 4.568 0.01038 0.06278
RegionR5 0.198 4.568 0.47188 0.83473
RegionR6 -0.293 4.568 0.35786 0.94219
RegionR7 -0.261 4.568 0.50853 1.00000
RegionR8 -1.932 4.568 0.00120 0.05356

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.793 4.568 0.02118 0.57702
RegenerationR2 -0.48 4.568 0.13507 0.56213
RegenerationR3 -0.334 4.568 0.33873 0.76306
RegenerationR4 -0.414 4.568 0.25080 0.69932
RegenerationR5 0.051 4.568 0.87416 1.00000
RegenerationR6 0.007 4.568 0.98697 1.00000
RegenerationBL 0.185 4.568 0.72809 1.00000
RegenerationTP 0.99 4.568 0.05172 0.37248


Genes with expression patterns similar to MligTC455_40747

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40747 942 19.63 Mlig455_053407

Neo: -

Age: -

 IVD 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_053407 {REF} {Length: 2492} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=137.6]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=135.1]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=100.3]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=32.7]} {Human: ENSG00000128928, IVD, isovaleryl-CoA dehydrogenase, [RH, Score=521, Expect=0.0]} {Mouse: ENSMUSG00000027332, Ivd, isovaleryl coenzyme A dehydrogenase, [RH, Score=536, Expect=0.0]} {Dmel: FBgn0035911, CG6638, [RH, Score=503, Expect=2e-178]} {Celegans: WBGene00015326, ivd-1, IsoValeryl-CoA Dehydrogenase; Isovaleryl-CoA dehydrogenase, [RH, Score=529, Expect=0.0]} {Smed: dd_Smed_v6_6336_0_1, dd_Smed_v6_6336_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_7456} {RNA1310_17394} {RNA815_7536}
2. MligTC455_48800 773 16.11 Mlig455_039264

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.979/0.00268

 1.747 - - - 0.957 - 0.790 Mlig455_039264 {REF} {Length: 1431} {TRANSSPLICED} {Pfam: Uncharacterised ACR, YagE family COG1723 [PF02582.16, score=106.1]} {Dmel: FBgn0030678, CG11679, [RH, Score=135, Expect=4e-36]} {Celegans: WBGene00014176, ZK1010.2, [RH, Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_8446_0_2, dd_Smed_v6_8446_0_2, [RH, Score=95.5, Expect=2e-22]} {RNA1509_19052, RNA1509_30282} {RNA1310_16765, RNA1509_19052, RNA1509_30282} {RNA1509_19052, RNA1509_30282, RNA815_13720}
3. MligTC455_14565 555 11.56 Mlig455_025146

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_025146 {REF} {Length: 2733} {TRANSSPLICED} {RNA1509_11357} {RNA1310_10080.1, RNA1509_11357} {RNA1509_11357, RNA815_13917}

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