TomoSeq data search

Data search

Results for MligTC455_40785

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40785

103

2.15

Mlig455_057342

Neo: -

Age: -

Mlig455_057342 {REF} {Length: 2298} {NoTransDecoderORF} {RNA1310_119835} {RNA815_38349}

Cumulative graph for MligTC455_40785

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.118	1.847	0.99962	1.00000
RegionR2	2.486	1.847	0.07238	0.32838
RegionR3	2.419	1.847	0.03990	0.34793
RegionR4	0.114	1.847	0.70965	0.99545
RegionR5	1.01	1.847	0.38513	0.74012
RegionR6	1.176	1.847	0.36226	0.94477
RegionR7	-3.338	1.847	0.99967	1.00000
RegionR8	1.251	1.847	0.46253	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.058	1.847	1.00000	1.00000
RegenerationR2	0.674	1.847	0.41458	0.82343
RegenerationR3	0.618	1.847	0.48911	0.85384
RegenerationR4	1.646	1.847	0.09577	0.48081
RegenerationR5	0.751	1.847	0.40429	0.80142
RegenerationR6	1.429	1.847	0.15144	0.47699
RegenerationBL	2.937	1.847	0.02779	0.18462
RegenerationTP	2.525	1.847	0.18522	0.62218

Genes with expression patterns similar to MligTC455_40785

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40785	103	2.15	Mlig455_057342	Neo: - Age: -		4	-	-	1.000	1.000	1.000	1.000	Mlig455_057342 {REF} {Length: 2298} {NoTransDecoderORF} {RNA1310_119835} {RNA815_38349}
2.	MligTC455_34645	89	1.85	Mlig455_063696	Neo: - Age: -		0.972	-	-	-	-	-	0.972	Mlig455_063696 {REF} {Length: 2850} {RNA1509_28247} {RNA1310_21726.1} {RNA815_14540}
3.	MligTC455_30533	175	3.66	Mlig455_011508	Neo: - Age: logFC(26M/2M)=-0.396	ODF2	0.969	-	-	-	-	-	0.969	Mlig455_011508 {REF} {Length: 3294} {TRANSSPLICED} {Human: ENSG00000136811, ODF2, outer dense fiber of sperm tails 2, [Score=109, Expect=5e-24]} {Mouse: ENSMUSG00000026790, Odf2, outer dense fiber of sperm tails 2, [Score=109, Expect=4e-24]} {Smed: dd_Smed_v6_3609_0_2, dd_Smed_v6_3609_0_2, [Score=89.4, Expect=3e-18]} {RNA1509_12480} {RNA1310_8290} {RNA815_8319}
4.	MligTC455_20370	41	0.85	Mlig455_046379	Neo: - Age: Down-Up-Down		0.967	-	-	-	-	-	0.967	Mlig455_046379 {REF} {Length: 1870} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Family of unknown function (DUF5537) [PF17690.3, score=19.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=76.3, Expect=3e-14]} {RNA1509_51609} {RNA1310_24791} {RNA815_28268}
5.	MligTC455_14580	159	3.32	Mlig455_030626, Mlig455_030698, Mlig455_031017	Neo: - Age: logFC(26M/2M)=-0.809 Region-enriched R2: 3.469/0.03212		0.962	-	-	-	-	-	0.962	Mlig455_030626 {REF} {Length: 2569} {RNA1509_58943} {RNA1310_27039, RNA1509_58943} {RNA1509_58943, RNA815_16088} Mlig455_030698 {REF} {Length: 907} {RNA1509_39929} {RNA1310_27230} {RNA815_16088} Mlig455_031017 {REF} {Length: 1218} {RNA1509_39929} {RNA1310_27230} {RNA815_16088}
6.	MligTC455_25005	390	8.13	Mlig455_071003	Neo: - Age: Down-Down-Up		0.962	-	-	-	-	-	0.962	Mlig455_071003 {REF} {Length: 5546} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.0]; Capsular polysaccharide synthesis protein [PF05704.14, score=23.4]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [RH, Score=141, Expect=2e-39]} {RNA1509_41978} {RNA1310_22525} {RNA815_38804}
7.	MligTC455_41104	104	2.17	Mlig455_004385	Neo: Int S/G2/M Age: -	SSTR1	0.96	-	-	-	-	-	0.960	Mlig455_004385 {REF} {Length: 6171} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=139.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.6]; Olfactory receptor [PF13853.8, score=27.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.9]} {Human: ENSG00000139874, SSTR1, somatostatin receptor 1, [Score=113, Expect=3e-27]; ENSG00000162009, SSTR5, somatostatin receptor 5, [Score=112, Expect=5e-27]; ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=108, Expect=2e-25]; ENSG00000180616, SSTR2, somatostatin receptor 2, [Score=108, Expect=8e-26]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=116, Expect=1e-28]; ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=113, Expect=1e-27]; ENSMUSG00000035431, Sstr1, somatostatin receptor 1, [Score=112, Expect=3e-27]} {Dmel: FBgn0036790, AstC-R1, Allatostatin C receptor 1, [Score=119, Expect=2e-29]} {Celegans: WBGene00020086, npr-24, NeuroPeptide Receptor family, [Score=109, Expect=2e-26]} {Smed: dd_Smed_v6_17008_0_1, dd_Smed_v6_17008_0_1, [Score=132, Expect=7e-35]} {RNA1509_13787} {RNA1310_33575, RNA1509_13787} {RNA1509_13787, RNA815_48643}
8.	MligTC455_36498	48	1.01	Mlig455_069830	Neo: - Age: -	ANKRD28	0.956	-	-	-	-	-	0.956	Mlig455_069830 {REF} {Length: 3310} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=337.5]; Ankyrin repeats (many copies) [PF13637.8, score=296.4]; Ankyrin repeats (many copies) [PF13857.8, score=236.9]; Ankyrin repeat [PF00023.32, score=231.2]; Ankyrin repeat [PF13606.8, score=224.2]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=503, Expect=1e-161]} {Mouse: ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=509, Expect=6e-164]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=214, Expect=9e-57]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=204, Expect=3e-54]} {Smed: dd_Smed_v6_7952_0_1, dd_Smed_v6_7952_0_1, [Score=346, Expect=4e-103]} {RNA1509_34578} {RNA1310_5778.2} {RNA815_38570}
9.	MligTC455_40284	142	2.97	Mlig455_045795	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_045795 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_26792} {RNA1310_13078}

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