TomoSeq data search

Data search

Results for MligTC455_40787

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40787

943

19.64

Mlig455_048927

Neo: -

Age: logFC(26M/2M)=0.300

Regeneration-upregulated BL: 1.955

Regeneration-enriched BL: 1.955

SUZ12

Mlig455_048927 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=248, Expect=8e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=250, Expect=1e-72]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=7e-50]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=192, Expect=7e-53]} {RNA1509_14604, RNA1509_53519, RNA1509_55257} {RNA1310_6938, RNA1509_14604, RNA1509_53519, RNA1509_55257} {RNA1509_14604, RNA1509_53519, RNA1509_55257, RNA815_5348}

Cumulative graph for MligTC455_40787

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.888	4.473	0.36499	1.00000
RegionR2	1.114	4.473	0.01450	0.12667
RegionR3	0.497	4.473	0.19705	0.73605
RegionR4	0.083	4.473	0.82731	1.00000
RegionR5	0.876	4.473	0.00717	0.04536
RegionR6	0.634	4.473	0.10025	0.58134
RegionR7	-0.579	4.473	0.33010	0.96502
RegionR8	-1.736	4.473	0.04831	0.43121

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.051	4.473	0.37899	1.00000
RegenerationR2	0.152	4.473	0.65837	0.94049
RegenerationR3	0.561	4.473	0.14264	0.56909
RegenerationR4	0.227	4.473	0.54521	0.89050
RegenerationR5	0.564	4.473	0.08921	0.45953
RegenerationR6	0.65	4.473	0.08623	0.36745
RegenerationBL	1.955	4.473	0.00006	0.00301	Specific for BL: 1.955
RegenerationTP	1.544	4.473	0.01661	0.22155

Genes with expression patterns similar to MligTC455_40787

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40787	943	19.64	Mlig455_048927	Neo: - Age: logFC(26M/2M)=0.300 Regeneration-upregulated BL: 1.955 Regeneration-enriched BL: 1.955	SUZ12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048927 {REF} {Length: 2612} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=248, Expect=8e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=250, Expect=1e-72]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=7e-50]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=192, Expect=7e-53]} {RNA1509_14604, RNA1509_53519, RNA1509_55257} {RNA1310_6938, RNA1509_14604, RNA1509_53519, RNA1509_55257} {RNA1509_14604, RNA1509_53519, RNA1509_55257, RNA815_5348}
2.	MligTC455_13397	328	6.83	Mlig455_005290	Neo: - Age: - Region-enriched R5: 1.444/0.00333	EXTL3	1.75	0.962	-	-	-	0.788	-	Mlig455_005290 {REF} {Length: 4329} {TRANSSPLICED} {Pfam: Glycosyl transferase family 64 domain [PF09258.12, score=287.7]; Exostosin family [PF03016.17, score=37.3]} {Human: ENSG00000012232, EXTL3, exostosin like glycosyltransferase 3, [RH, Score=481, Expect=4e-156]} {Mouse: ENSMUSG00000021978, Extl3, exostoses (multiple)-like 3, [RH, Score=478, Expect=4e-155]} {Dmel: FBgn0027535, botv, brother of tout-velu, [RH, Score=479, Expect=9e-155]} {Celegans: WBGene00004361, rib-2, Exostosin-2 homolog, [RH, Score=399, Expect=5e-126]} {Smed: dd_Smed_v6_14625_0_1, dd_Smed_v6_14625_0_1, [RH, Score=441, Expect=4e-142]} {RNA1509_24376} {RNA1310_18189, RNA1509_24376} {RNA1509_24376, RNA815_24950}
3.	MligTC455_13396	351	7.3	Mlig455_004986	Neo: - Age: - Region-enriched R5: 1.511/0.00084		1.683	0.958	-	-	-	0.725	-	Mlig455_004986 {REF} {Length: 799} {NoTransDecoderORF} {RNA1509_31555, RNA1509_50636} {RNA1310_44877, RNA1509_31555} {RNA1509_31555, RNA815_24950}
4.	MligTC455_48912	1317	27.44	Mlig455_042981, Mlig455_043015	Neo: - Age: -	GOLGA4	0.967	-	-	-	0.967	-	-	Mlig455_042981 {REF} {Length: 3206} {Pfam: GRIP domain [PF01465.22, score=34.3]} {Human: ENSG00000144674, GOLGA4, golgin A4, [RH, Score=70.1, Expect=1e-11]} {Mouse: ENSMUSG00000038708, Golga4, golgi autoantigen, golgin subfamily a, 4, [RH, Score=71.2, Expect=3e-12]} {Celegans: WBGene00010306, golg-4, GOLGi associated coiled-coil protein homolog, [Score=66.2, Expect=7e-11]} {Smed: dd_Smed_v6_10306_0_1, dd_Smed_v6_10306_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_19374} {RNA1310_3750.2} {RNA815_14892.1} Mlig455_043015 {REF} {Length: 2880} {Pfam: GRIP domain [PF01465.22, score=31.9]} {Human: ENSG00000144674, GOLGA4, golgin A4, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038708, Golga4, golgi autoantigen, golgin subfamily a, 4, [RH, Score=71.2, Expect=4e-12]} {Celegans: WBGene00010306, golg-4, GOLGi associated coiled-coil protein homolog, [Score=64.7, Expect=2e-10]} {Smed: dd_Smed_v6_10306_0_1, dd_Smed_v6_10306_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_19374} {RNA1310_3750.1} {RNA815_14892.1}
5.	MligTC455_52212	1606	33.46	Mlig455_014430	Neo: - Age: - Regeneration-upregulated BL: 1.347 Regeneration-enriched BL: 1.347	MARK2	0.958	-	-	-	0.958	-	-	Mlig455_014430 {REF} {Length: 5942} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=155.0]; Kinase associated domain 1 [PF02149.21, score=67.5]; Kinase-like [PF14531.8, score=29.6]; ABC1 atypical kinase-like domain [PF03109.18, score=27.7]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=574, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=573, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=569, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=554, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=551, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=7e-180]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_6824}
6.	MligTC455_49867	590	12.3	Mlig455_011558	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.462 Region-enriched R4: 1.418/0.00393	CSNK1A1	0.957	-	-	-	0.957	-	-	Mlig455_011558 {REF} {Length: 2036} {Pfam: Protein kinase domain [PF00069.27, score=99.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=61.6]; Fungal protein kinase [PF17667.3, score=34.9]} {Human: ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0015024, CkIalpha, Casein kinase Ialpha, [RH, Score=498, Expect=5e-179]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [RH, Score=574, Expect=0.0]} {RNA1509_1920} {RNA1310_7964} {RNA815_4066.1}
7.	MligTC455_52213	1604	33.41	Mlig455_070178	Neo: - Age: - Regeneration-upregulated BL: 1.322 Regeneration-enriched BL: 1.322	MARK2	0.957	-	-	-	0.957	-	-	Mlig455_070178 {REF} {Length: 4522} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=154.7]; Kinase-like [PF14531.8, score=30.7]; ABC1 atypical kinase-like domain [PF03109.18, score=27.9]; RIO1 family [PF01163.24, score=19.2]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [RH, Score=571, Expect=0.0]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [RH, Score=559, Expect=0.0]; ENSG00000116141, MARK1, microtubule affinity regulating kinase 1, [RH, Score=552, Expect=0.0]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [RH, Score=575, Expect=0.0]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [RH, Score=570, Expect=0.0]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [RH, Score=553, Expect=0.0]; ENSMUSG00000026620, Mark1, MAP/microtubule affinity regulating kinase 1, [RH, Score=550, Expect=0.0]} {Dmel: FBgn0260934, par-1, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_3685_0_1, dd_Smed_v6_3685_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_2419} {RNA1310_1494} {RNA815_2395}
8.	MligTC455_29410	721	15.02	Mlig455_001898, Mlig455_048796	Neo: - Age: -	ARL14EP	0.954	-	-	-	0.954	-	-	Mlig455_001898 {REF} {Length: 1826} {TRANSSPLICED} {Pfam: ARF7 effector protein C-terminus [PF14949.8, score=74.4]} {Human: ENSG00000152219, ARL14EP, ADP ribosylation factor like GTPase 14 effector protein, [RH, Score=70.9, Expect=2e-14]} {Mouse: ENSMUSG00000027122, Arl14ep, ADP-ribosylation factor-like 14 effector protein, [RH, Score=71.2, Expect=1e-14]} {Dmel: FBgn0033000, CG14464, [RH, Score=60.5, Expect=6e-12]} {Smed: dd_Smed_v6_3415_0_1, dd_Smed_v6_3415_0_1, [RH, Score=71.6, Expect=2e-16]} {RNA1509_17155} {RNA1310_29060} {RNA815_22959} Mlig455_048796 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: ARF7 effector protein C-terminus [PF14949.8, score=72.5]} {Human: ENSG00000152219, ARL14EP, ADP ribosylation factor like GTPase 14 effector protein, [RH, Score=69.3, Expect=7e-14]} {Mouse: ENSMUSG00000027122, Arl14ep, ADP-ribosylation factor-like 14 effector protein, [RH, Score=69.7, Expect=4e-14]} {Smed: dd_Smed_v6_3415_0_1, dd_Smed_v6_3415_0_1, [RH, Score=70.1, Expect=6e-16]} {RNA1509_17155, RNA1509_32093} {RNA1310_29060, RNA1509_17155, RNA1509_32093} {RNA1509_17155, RNA1509_32093, RNA815_22959}

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