Data search
Results for MligTC455_40886
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40886 | 1842 | 38.38 | Mlig455_055898 | Neo: Irradiation Age: logFC(26M/2M)=0.361 |
EIF4H | Mlig455_055898 {REF} {Length: 2452} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.5]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [RH, Score=99.4, Expect=6e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [RH, Score=98.6, Expect=4e-24]} {Dmel: FBgn0039797, eIF4H2, eukaryotic translation initiation factor 4H2, [RH, Score=85.9, Expect=2e-18]} {Celegans: WBGene00011156, R09B3.3, [Score=61.2, Expect=5e-12]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=123, Expect=7e-33]} {RNA1509_21880, RNA1509_32615, RNA1509_4988} {RNA1310_29276, RNA1509_21880, RNA1509_32615, RNA1509_4988} {RNA1509_21880, RNA1509_32615, RNA1509_4988, RNA815_11244} |
Cumulative graph for MligTC455_40886
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.212 | 5.425 | 0.76382 | 1.00000 | |
| RegionR2 | -0.081 | 5.425 | 0.81683 | 1.00000 | |
| RegionR3 | -0.308 | 5.425 | 0.27815 | 0.82195 | |
| RegionR4 | 0.542 | 5.425 | 0.08489 | 0.27567 | |
| RegionR5 | 0.54 | 5.425 | 0.02869 | 0.12564 | |
| RegionR6 | -0.127 | 5.425 | 0.65735 | 1.00000 | |
| RegionR7 | 0.412 | 5.425 | 0.21365 | 0.83016 | |
| RegionR8 | -0.765 | 5.425 | 0.11047 | 0.61733 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.637 | 5.425 | 0.48481 | 1.00000 | |
| RegenerationR2 | 0.254 | 5.425 | 0.40752 | 0.81846 | |
| RegenerationR3 | 0.838 | 5.425 | 0.01286 | 0.20949 | |
| RegenerationR4 | 0.195 | 5.425 | 0.55268 | 0.89343 | |
| RegenerationR5 | 0.12 | 5.425 | 0.69118 | 0.94828 | |
| RegenerationR6 | 0.822 | 5.425 | 0.01197 | 0.13450 | |
| RegenerationBL | 0.592 | 5.425 | 0.10366 | 0.38000 | |
| RegenerationTP | 0.175 | 5.425 | 0.67578 | 1.00000 |
Genes with expression patterns similar to MligTC455_40886
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40886 | 1842 | 38.38 | Mlig455_055898 | Neo: Irradiation Age: logFC(26M/2M)=0.361 |
EIF4H | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055898 {REF} {Length: 2452} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.5]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [RH, Score=99.4, Expect=6e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [RH, Score=98.6, Expect=4e-24]} {Dmel: FBgn0039797, eIF4H2, eukaryotic translation initiation factor 4H2, [RH, Score=85.9, Expect=2e-18]} {Celegans: WBGene00011156, R09B3.3, [Score=61.2, Expect=5e-12]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=123, Expect=7e-33]} {RNA1509_21880, RNA1509_32615, RNA1509_4988} {RNA1310_29276, RNA1509_21880, RNA1509_32615, RNA1509_4988} {RNA1509_21880, RNA1509_32615, RNA1509_4988, RNA815_11244} |
| 2. | MligTC455_40885 | 1759 | 36.64 | Mlig455_023980 | Neo: Neoblast, stringent Age: - |
EIF4H | 4.647 | 0.828 | 0.946 | 0.926 | 0.975 | 0.972 | - | Mlig455_023980 {REF} {Length: 3686} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.6]} {Human: ENSG00000106682, EIF4H, eukaryotic translation initiation factor 4H, [RH, Score=99.8, Expect=3e-24]} {Mouse: ENSMUSG00000040731, Eif4h, eukaryotic translation initiation factor 4H, [RH, Score=100, Expect=9e-25]} {Dmel: FBgn0039797, eIF4H2, eukaryotic translation initiation factor 4H2, [RH, Score=85.9, Expect=1e-18]} {Celegans: WBGene00011156, R09B3.3, [Score=61.2, Expect=5e-12]} {Smed: dd_Smed_v6_4137_0_1, dd_Smed_v6_4137_0_1, [RH, Score=125, Expect=8e-34]} {RNA1509_10581, RNA1509_19804, RNA1509_28828} {RNA1310_29276, RNA1509_10581, RNA1509_19804, RNA1509_28828} {RNA1509_10581, RNA1509_19804, RNA1509_28828, RNA815_13151} |
| 3. | MligTC455_15562 | 2747 | 57.23 | Mlig455_011151 | Neo: - Age: - |
1.739 | - | - | 0.789 | 0.950 | - | - | Mlig455_011151 {REF} {Length: 1349} {TRANSSPLICED} {RNA1509_22227} {RNA1310_25296} {RNA815_16722} | |
| 4. | MligTC455_15563 | 2750 | 57.29 | Mlig455_050862 | Neo: Neoblast |
CSTF2 | 1.739 | - | - | 0.789 | 0.950 | - | - | Mlig455_050862 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: Hinge domain of cleavage stimulation factor subunit 2 [PF14327.8, score=101.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=77.0]; Transcription termination and cleavage factor C-terminal [PF14304.8, score=68.6]} {Human: ENSG00000101811, CSTF2, cleavage stimulation factor subunit 2, [RH, Score=263, Expect=5e-82]; ENSG00000177613, CSTF2T, cleavage stimulation factor subunit 2 tau variant, [RH, Score=256, Expect=2e-79]} {Mouse: ENSMUSG00000031256, Cstf2, cleavage stimulation factor, 3' pre-RNA subunit 2, [RH, Score=263, Expect=1e-82]; ENSMUSG00000053536, Cstf2t, cleavage stimulation factor, 3' pre-RNA subunit 2, tau, [RH, Score=255, Expect=4e-79]} {Dmel: FBgn0027841, CstF64, Cleavage stimulation factor 64 kD subunit, [RH, Score=235, Expect=7e-74]} {Celegans: WBGene00000774, cpf-2, Cleavage and Polyadenylation Factor, [RH, Score=207, Expect=5e-64]} {Smed: dd_Smed_v6_3081_0_1, dd_Smed_v6_3081_0_1, [RH, Score=322, Expect=2e-108]} {RNA1509_22227, RNA1509_50706, RNA1509_53963} {RNA1310_25296, RNA1509_22227, RNA1509_50706, RNA1509_53963} {RNA1509_22227, RNA1509_50706, RNA1509_53963, RNA815_16722} |
Berezikov Lab - 2020-2021 © ERIBA