TomoSeq data search

Data search

Results for MligTC455_40888

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40888	5943	123.81	Mlig455_060985	Neo: Neoblast, stringent Age: logFC(26M/2M)=0.236	NCL	Mlig455_060985 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=75.7]} {Human: ENSG00000115053, NCL, nucleolin, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000026234, Ncl, nucleolin, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=59.7, Expect=4e-09]} {RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1310_4975.1, RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1509_39706, RNA1509_4263, RNA1509_831, RNA815_1386.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40888

5943

123.81

Mlig455_060985

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.236

NCL

Mlig455_060985 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=75.7]} {Human: ENSG00000115053, NCL, nucleolin, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000026234, Ncl, nucleolin, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=59.7, Expect=4e-09]} {RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1310_4975.1, RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1509_39706, RNA1509_4263, RNA1509_831, RNA815_1386.2}

Cumulative graph for MligTC455_40888

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.099	7.027	0.83933	1.00000
RegionR2	-1.006	7.027	0.00154	0.02928
RegionR3	-0.14	7.027	0.58626	1.00000
RegionR4	0.668	7.027	0.02183	0.10858
RegionR5	0.855	7.027	0.00026	0.00353
RegionR6	0.1	7.027	0.69537	1.00000
RegionR7	-0.004	7.027	0.99002	1.00000
RegionR8	-0.375	7.027	0.29091	0.91906

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.051	7.027	0.93522	1.00000
RegenerationR2	0.331	7.027	0.29073	0.73367
RegenerationR3	0.328	7.027	0.30964	0.74040
RegenerationR4	-0.043	7.027	0.89376	1.00000
RegenerationR5	-0.057	7.027	0.85279	1.00000
RegenerationR6	0.816	7.027	0.00988	0.12243
RegenerationBL	0.564	7.027	0.05505	0.27160
RegenerationTP	-0.364	7.027	0.29384	0.73925

Genes with expression patterns similar to MligTC455_40888

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40888	5943	123.81	Mlig455_060985	Neo: Neoblast, stringent Age: logFC(26M/2M)=0.236	NCL	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060985 {REF} {Length: 3180} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=75.7]} {Human: ENSG00000115053, NCL, nucleolin, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000026234, Ncl, nucleolin, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=59.7, Expect=4e-09]} {RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1310_4975.1, RNA1509_39706, RNA1509_4263, RNA1509_831} {RNA1509_39706, RNA1509_4263, RNA1509_831, RNA815_1386.2}
2.	MligTC455_40887	5552	115.66	Mlig455_060918	Neo: Int S/G2/M Age: logFC(26M/2M)=0.311		5.671	0.978	0.982	0.816	0.934	0.992	0.969	Mlig455_060918 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=76.2]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=60.5, Expect=3e-09]} {RNA1509_3458, RNA1509_52549} {RNA1310_4975.1, RNA1509_3458} {RNA1509_3458, RNA815_1386.1}
3.	MligTC455_17863	8586	178.87	Mlig455_011849, Mlig455_013127	Neo: - Age: -	PROM1	0.958	-	-	-	-	0.958	-	Mlig455_011849 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=193.7]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=81.3, Expect=5e-15]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [Score=130, Expect=1e-30]} {Smed: dd_Smed_v6_4461_0_1, dd_Smed_v6_4461_0_1, [Score=162, Expect=4e-41]} {RNA1509_11514, RNA1509_15085, RNA1509_21096, RNA1509_43496} {RNA1310_4103.1, RNA1509_11514, RNA1509_15085, RNA1509_21096} {RNA1509_11514, RNA1509_15085, RNA1509_21096, RNA815_1781} Mlig455_013127 {REF} {Length: 3361} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=193.7]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=81.3, Expect=5e-15]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [Score=130, Expect=1e-30]} {Smed: dd_Smed_v6_4461_0_1, dd_Smed_v6_4461_0_1, [Score=162, Expect=4e-41]} {RNA1509_43496} {RNA1310_4103.1, RNA1509_43496} {RNA1509_43496, RNA815_1781}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40888

5943

123.81

Mlig455_060985

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.236

NCL

1.000

MligTC455_40887

5552

115.66

Mlig455_060918

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.311

5.671

0.978

0.982

0.816

0.934

0.992

0.969

Mlig455_060918 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=76.2]} {Smed: dd_Smed_v6_8569_0_1, dd_Smed_v6_8569_0_1, [RH, Score=60.5, Expect=3e-09]} {RNA1509_3458, RNA1509_52549} {RNA1310_4975.1, RNA1509_3458} {RNA1509_3458, RNA815_1386.1}

MligTC455_17863

8586

178.87

Mlig455_011849, Mlig455_013127

Neo: -

Age: -

PROM1

0.958

Mlig455_011849 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=193.7]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=81.3, Expect=5e-15]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [Score=130, Expect=1e-30]} {Smed: dd_Smed_v6_4461_0_1, dd_Smed_v6_4461_0_1, [Score=162, Expect=4e-41]} {RNA1509_11514, RNA1509_15085, RNA1509_21096, RNA1509_43496} {RNA1310_4103.1, RNA1509_11514, RNA1509_15085, RNA1509_21096} {RNA1509_11514, RNA1509_15085, RNA1509_21096, RNA815_1781}

Mlig455_013127 {REF} {Length: 3361} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=193.7]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=81.3, Expect=5e-15]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [Score=130, Expect=1e-30]} {Smed: dd_Smed_v6_4461_0_1, dd_Smed_v6_4461_0_1, [Score=162, Expect=4e-41]} {RNA1509_43496} {RNA1310_4103.1, RNA1509_43496} {RNA1509_43496, RNA815_1781}