Data search
Results for MligTC455_40912
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40912 | 848 | 17.66 | Mlig455_057776 | Neo: - Age: logFC(26M/2M)=0.430 Region-enriched R7: 1.609/0.02884 |
Mlig455_057776 {REF} {Length: 1686} {RNA1509_21931, RNA1509_53395} {RNA1310_25622, RNA1509_21931, RNA1509_53395} {RNA1509_21931, RNA1509_53395, RNA815_13250.1} |
Cumulative graph for MligTC455_40912
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.483 | 4.357 | 0.27918 | 0.93040 | |
| RegionR2 | 0.325 | 4.357 | 0.55679 | 0.92037 | |
| RegionR3 | 0.122 | 4.357 | 0.79543 | 1.00000 | |
| RegionR4 | 0.192 | 4.357 | 0.73023 | 1.00000 | |
| RegionR5 | -0.3 | 4.357 | 0.54535 | 0.90733 | |
| RegionR6 | 1.377 | 4.357 | 0.00288 | 0.07684 | |
| RegionR7 | 1.609 | 4.357 | 0.00077 | 0.02884 | |
| RegionR8 | -1.841 | 4.357 | 0.05677 | 0.46528 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.461 | 4.357 | 0.79957 | 1.00000 | |
| RegenerationR2 | -1.831 | 4.357 | 0.00048 | 0.02986 | |
| RegenerationR3 | -0.494 | 4.357 | 0.34933 | 0.77007 | |
| RegenerationR4 | -0.5 | 4.357 | 0.35052 | 0.78054 | |
| RegenerationR5 | -0.506 | 4.357 | 0.33947 | 0.75744 | |
| RegenerationR6 | -1.555 | 4.357 | 0.00462 | 0.08199 | |
| RegenerationBL | -0.755 | 4.357 | 0.24872 | 0.60449 | |
| RegenerationTP | 0.017 | 4.357 | 0.97488 | 1.00000 |
Genes with expression patterns similar to MligTC455_40912
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40912 | 848 | 17.66 | Mlig455_057776 | Neo: - Age: logFC(26M/2M)=0.430 Region-enriched R7: 1.609/0.02884 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_057776 {REF} {Length: 1686} {RNA1509_21931, RNA1509_53395} {RNA1310_25622, RNA1509_21931, RNA1509_53395} {RNA1509_21931, RNA1509_53395, RNA815_13250.1} | |
| 2. | MligTC455_40911 | 743 | 15.48 | Mlig455_036574 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.341 Region-enriched R6: 1.622/0.02762 |
4.146 | 0.957 | 0.870 | 0.712 | 0.805 | 0.802 | - | Mlig455_036574 {REF} {Length: 1251} {RNA1509_21931} {RNA1310_40926} {RNA815_15203} | |
| 3. | MligTC455_04397 | 39 | 0.82 | Mlig455_062191 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_062191 {REF} {Length: 1198} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=82.1]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=69.3, Expect=4e-12]} |
Berezikov Lab - 2020-2021 © ERIBA