TomoSeq data search

Data search

Results for MligTC455_40921

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40921

1086

22.63

Mlig455_004943

Neo: -

Age: -

Region-enriched R7: 2.188/0.00000

Mlig455_004943 {REF} {Length: 1304} {Pfam: Zinc-binding domain [PF13695.8, score=29.5]} {RNA1509_45450} {RNA1310_14449} {RNA815_2235}

Cumulative graph for MligTC455_40921

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.311	4.545	0.31389	0.96317
RegionR2	-1.299	4.545	0.00874	0.09280
RegionR3	-0.292	4.545	0.47548	0.97975
RegionR4	0.608	4.545	0.20145	0.48166
RegionR5	-0.974	4.545	0.03221	0.13661
RegionR6	-0.003	4.545	0.99703	1.00000
RegionR7	2.188	4.545	0.00000	0.00000
RegionR8	1.084	4.545	0.05183	0.44378

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.172	4.545	0.47836	1.00000
RegenerationR2	0.042	4.545	0.91625	1.00000
RegenerationR3	0.295	4.545	0.47289	0.84578
RegenerationR4	0.412	4.545	0.32745	0.76332
RegenerationR5	0.853	4.545	0.04763	0.35366
RegenerationR6	0.447	4.545	0.29407	0.64469
RegenerationBL	1.013	4.545	0.00507	0.06622
RegenerationTP	0.547	4.545	0.17365	0.60665

Genes with expression patterns similar to MligTC455_40921

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40921	1086	22.63	Mlig455_004943	Neo: - Age: - Region-enriched R7: 2.188/0.00000		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004943 {REF} {Length: 1304} {Pfam: Zinc-binding domain [PF13695.8, score=29.5]} {RNA1509_45450} {RNA1310_14449} {RNA815_2235}
2.	MligTC455_40922	2760	57.5	Mlig455_019713	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.414 Region-enriched R7: 1.766/0.00003		4.365	0.933	0.856	0.787	-	0.962	0.827	Mlig455_019713 {REF} {Length: 2146} {Pfam: Zinc-binding domain [PF13695.8, score=81.1]} {Mouse: ENSMUSG00000033355, Rtp4, receptor transporter protein 4, [RH, Score=62.8, Expect=7e-11]} {Smed: dd_Smed_v6_4477_0_1, dd_Smed_v6_4477_0_1, [Score=101, Expect=4e-25]} {RNA1509_3607, RNA1509_45450, RNA1509_51216} {RNA1310_14449, RNA1509_3607, RNA1509_45450, RNA1509_51216} {RNA1509_3607, RNA1509_45450, RNA1509_51216, RNA815_2235}
3.	MligTC455_51024	78	1.63	Mlig455_042673	Neo: - Age: - Region-enriched R8: 6.900/0.00001 Region-enriched R7: 6.240/0.00000 Region-enriched R6: 2.978/0.04172		3.192	0.953	0.733	0.778	-	-	0.728	Mlig455_042673 {REF} {Length: 1953} {RNA1310_20305} {RNA815_32236}
4.	MligTC455_24496	662	13.79	Mlig455_038081	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.244 Region-enriched R8: 6.186/0.00000 Region-enriched R7: 5.495/0.00000 Region-enriched R6: 3.265/0.00016		1.775	-	-	-	0.820	-	0.955	Mlig455_038081 {REF} {Length: 1293} {RNA1509_9617} {RNA1310_33130} {RNA815_14842}
5.	MligTC455_22850	372	7.75	Mlig455_031130	Neo: - Age: Down-Up-Up Region-enriched R7: 3.011/0.00131 Regeneration-enriched R5: 2.202 Regeneration-enriched R6: 2.096		1.695	0.950	-	-	0.745	-	-	Mlig455_031130 {REF} {Length: 3011} {Smed: dd_Smed_v6_7191_0_1, dd_Smed_v6_7191_0_1, [RH, Score=116, Expect=3e-28]} {RNA1509_36152} {RNA1310_7995, RNA1509_36152} {RNA1509_36152, RNA815_32401}
6.	MligTC455_54297	387	8.06	Mlig455_062859, Mlig455_062940	Neo: - Age: - Region-enriched R7: 3.267/0.01330 Region-enriched R2: 3.089/0.02940 Regeneration-upregulated BL: 4.294 Regeneration-enriched BL: 4.294	ZNF335	1.68	-	-	-	0.961	0.719	-	Mlig455_062859 {REF} {Length: 2217} {Pfam: Zinc-finger double domain [PF13465.8, score=24.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.2]; Zinc finger, C2H2 type [PF00096.28, score=20.0]} {Human: ENSG00000198026, ZNF335, zinc finger protein 335, [Score=66.2, Expect=7e-11]; ENSG00000170265, ZNF282, zinc finger protein 282, [Score=63.9, Expect=3e-10]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=63.2, Expect=6e-10]; ENSG00000215421, ZNF407, zinc finger protein 407, [Score=63.2, Expect=7e-10]} {Mouse: ENSMUSG00000039834, Zfp335, zinc finger protein 335, [Score=66.2, Expect=5e-11]; ENSMUSG00000025821, Zfp282, zinc finger protein 282, [Score=64.3, Expect=2e-10]; ENSMUSG00000048410, Zfp407, zinc finger protein 407, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0001180, hb, hunchback, [Score=181, Expect=1e-49]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=162, Expect=4e-43]} {Smed: dd_Smed_v6_47627_0_1, dd_Smed_v6_47627_0_1, [Score=162, Expect=5e-45]} {RNA1509_53149} {RNA1310_13961, RNA1509_53149} {RNA1509_53149, RNA815_18586.1} Mlig455_062940 {REF} {Length: 1995} {Pfam: Zinc-finger double domain [PF13465.8, score=24.6]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.2]; Zinc finger, C2H2 type [PF00096.28, score=20.1]} {Human: ENSG00000198026, ZNF335, zinc finger protein 335, [Score=66.2, Expect=7e-11]; ENSG00000170265, ZNF282, zinc finger protein 282, [Score=63.9, Expect=3e-10]; ENSG00000215421, ZNF407, zinc finger protein 407, [Score=63.5, Expect=6e-10]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=63.2, Expect=6e-10]} {Mouse: ENSMUSG00000039834, Zfp335, zinc finger protein 335, [Score=65.9, Expect=6e-11]; ENSMUSG00000025821, Zfp282, zinc finger protein 282, [Score=64.3, Expect=1e-10]; ENSMUSG00000048410, Zfp407, zinc finger protein 407, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0001180, hb, hunchback, [Score=181, Expect=1e-49]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=162, Expect=4e-43]} {Smed: dd_Smed_v6_47627_0_1, dd_Smed_v6_47627_0_1, [Score=163, Expect=4e-45]} {RNA1509_53149} {RNA1310_13961} {RNA815_18586.1}
7.	MligTC455_17590	87	1.82	Mlig455_062602	Neo: - Age: - Region-enriched R8: 3.598/0.04613		0.953	0.953	-	-	-	-	-	Mlig455_062602 {REF} {Length: 695} {NoTransDecoderORF} {RNA1310_54038} {RNA815_27582}
8.	MligTC455_24307	462	9.63	Mlig455_003468, Mlig455_058146	Neo: - Age: -	MTMR6	0.952	-	-	-	0.952	-	-	Mlig455_003468 {REF} {Length: 3617} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=425.7]; FYVE zinc finger [PF01363.23, score=19.2]} {Human: ENSG00000139505, MTMR6, myotubularin related protein 6, [RH, Score=356, Expect=3e-112]} {Mouse: ENSMUSG00000021987, Mtmr6, myotubularin related protein 6, [RH, Score=362, Expect=2e-114]} {Dmel: FBgn0028497, CG3530, [RH, Score=330, Expect=1e-101]} {Celegans: WBGene00003478, mtm-6, Myotubularin-related protein 6, [RH, Score=325, Expect=3e-99]} {Smed: dd_Smed_v6_7071_0_1, dd_Smed_v6_7071_0_1, [RH, Score=332, Expect=3e-102]} {RNA1509_21219} {RNA1310_7250} {RNA815_3587} Mlig455_058146 {REF} {Length: 3908} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=426.2]; FYVE zinc finger [PF01363.23, score=20.9]} {Human: ENSG00000139505, MTMR6, myotubularin related protein 6, [RH, Score=357, Expect=2e-112]} {Mouse: ENSMUSG00000021987, Mtmr6, myotubularin related protein 6, [RH, Score=361, Expect=3e-114]} {Dmel: FBgn0028497, CG3530, [RH, Score=331, Expect=4e-102]} {Celegans: WBGene00003478, mtm-6, Myotubularin-related protein 6, [RH, Score=325, Expect=5e-99]} {Smed: dd_Smed_v6_7071_0_1, dd_Smed_v6_7071_0_1, [RH, Score=332, Expect=2e-102]} {RNA1509_21219, RNA1509_45608} {RNA1310_7250, RNA1509_21219, RNA1509_45608} {RNA1509_21219, RNA1509_45608, RNA815_3587}
9.	MligTC455_07303	18	0.37	Mlig455_051453	Neo: - Age: Up-Down-Up	CEL	0.95	-	-	-	-	0.950	-	Mlig455_051453 {REF} {Length: 3013} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=194.7]} {Human: ENSG00000170835, CEL, carboxyl ester lipase, [Score=99.8, Expect=7e-21]} {Mouse: ENSMUSG00000030873, Scnn1b, sodium channel, nonvoltage-gated 1 beta, [Score=60.1, Expect=8e-09]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_34707_0_1, dd_Smed_v6_34707_0_1, [Score=102, Expect=1e-22]} {RNA1310_36738} {RNA815_32966}

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