TomoSeq data search

Data search

Results for MligTC455_40931

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40931	1601	33.36	Mlig455_050820	Neo: - Age: -	IFT20	Mlig455_050820 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Intraflagellar transport complex B, subunit 20 [PF14931.8, score=118.6]} {Human: ENSG00000109083, IFT20, intraflagellar transport 20, [Score=101, Expect=4e-28]} {Mouse: ENSMUSG00000001105, Ift20, intraflagellar transport 20, [Score=102, Expect=1e-28]} {Dmel: FBgn0050441, CG30441, [Score=76.3, Expect=1e-18]} {Smed: dd_Smed_v6_9545_0_1, dd_Smed_v6_9545_0_1, [Score=100, Expect=2e-28]} {RNA1509_10898, RNA1509_51029} {RNA1310_51840.2, RNA1509_10898, RNA1509_51029} {RNA1509_10898, RNA1509_51029, RNA815_29325}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_40931

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.653	5.219	0.03814	0.47840
RegionR2	0.332	5.219	0.42882	0.81901
RegionR3	0.073	5.219	0.83628	1.00000
RegionR4	0.306	5.219	0.45981	0.78786
RegionR5	0.702	5.219	0.03557	0.14643
RegionR6	0.159	5.219	0.65906	1.00000
RegionR7	0.332	5.219	0.37999	1.00000
RegionR8	-0.251	5.219	0.57631	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.929	5.219	0.19875	0.93944
RegenerationR2	0.108	5.219	0.79078	0.98675
RegenerationR3	0.218	5.219	0.62074	0.91695
RegenerationR4	0.594	5.219	0.18579	0.62720
RegenerationR5	-0.685	5.219	0.10330	0.48756
RegenerationR6	-0.375	5.219	0.40489	0.74096
RegenerationBL	-0.431	5.219	0.33045	0.69669
RegenerationTP	-0.254	5.219	0.58466	0.95238

Genes with expression patterns similar to MligTC455_40931

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40931	1601	33.36	Mlig455_050820	Neo: - Age: -	IFT20	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_050820 {REF} {Length: 619} {TRANSSPLICED} {Pfam: Intraflagellar transport complex B, subunit 20 [PF14931.8, score=118.6]} {Human: ENSG00000109083, IFT20, intraflagellar transport 20, [Score=101, Expect=4e-28]} {Mouse: ENSMUSG00000001105, Ift20, intraflagellar transport 20, [Score=102, Expect=1e-28]} {Dmel: FBgn0050441, CG30441, [Score=76.3, Expect=1e-18]} {Smed: dd_Smed_v6_9545_0_1, dd_Smed_v6_9545_0_1, [Score=100, Expect=2e-28]} {RNA1509_10898, RNA1509_51029} {RNA1310_51840.2, RNA1509_10898, RNA1509_51029} {RNA1509_10898, RNA1509_51029, RNA815_29325}
2.	MligTC455_46419	3450	71.87	Mlig455_001787	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.331	ABCB1	0.952	-	-	-	0.952	-	-	Mlig455_001787 {REF} {Length: 5707} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=438.9]; ABC transporter [PF00005.29, score=256.7]; RecF/RecN/SMC N terminal domain [PF02463.21, score=62.1]; AAA ATPase domain [PF13191.8, score=39.3]; AAA domain [PF13401.8, score=33.4]; Predicted ATPase of the ABC class [PF09818.11, score=30.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=30.2]; Zeta toxin [PF06414.14, score=27.1]; P-loop containing region of AAA domain [PF13555.8, score=26.2]; AAA domain [PF13604.8, score=24.8]; RsgA GTPase [PF03193.18, score=24.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=24.4]; Rad17 P-loop domain [PF03215.17, score=23.1]; Adenylylsulphate kinase [PF01583.22, score=22.7]; AAA domain [PF13238.8, score=20.8]; Protein of unknown function (DUF815) [PF05673.15, score=19.9]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=19.2]; Phosphoribulokinase / Uridine kinase family [PF00485.20, score=18.8]; ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=18.7]} {Human: ENSG00000085563, ABCB1, ATP binding cassette subfamily B member 1, [RH, Score=1188, Expect=0.0]; ENSG00000005471, ABCB4, ATP binding cassette subfamily B member 4, [RH, Score=1144, Expect=0.0]} {Mouse: ENSMUSG00000028970, Abcb1b, ATP-binding cassette, sub-family B (MDR/TAP), member 1B, [RH, Score=1180, Expect=0.0]; ENSMUSG00000040584, Abcb1a, ATP-binding cassette, sub-family B (MDR/TAP), member 1A, [RH, Score=1176, Expect=0.0]; ENSMUSG00000042476, Abcb4, ATP-binding cassette, sub-family B (MDR/TAP), member 4, [RH, Score=1139, Expect=0.0]} {Dmel: FBgn0010241, Mdr50, Multi drug resistance 50, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00004003, pgp-9, P-GlycoProtein related, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_4124_0_1, dd_Smed_v6_4124_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_1034, RNA1509_43495, RNA1509_48254} {RNA1310_1064, RNA1509_43495, RNA1509_48254} {RNA1509_43495, RNA1509_48254, RNA815_387.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40931

1601

33.36

Mlig455_050820

Neo: -

Age: -

IFT20

1.000

MligTC455_46419

3450

71.87

Mlig455_001787

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.331

ABCB1

0.952

Mlig455_001787 {REF} {Length: 5707} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=438.9]; ABC transporter [PF00005.29, score=256.7]; RecF/RecN/SMC N terminal domain [PF02463.21, score=62.1]; AAA ATPase domain [PF13191.8, score=39.3]; AAA domain [PF13401.8, score=33.4]; Predicted ATPase of the ABC class [PF09818.11, score=30.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=30.2]; Zeta toxin [PF06414.14, score=27.1]; P-loop containing region of AAA domain [PF13555.8, score=26.2]; AAA domain [PF13604.8, score=24.8]; RsgA GTPase [PF03193.18, score=24.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=24.4]; Rad17 P-loop domain [PF03215.17, score=23.1]; Adenylylsulphate kinase [PF01583.22, score=22.7]; AAA domain [PF13238.8, score=20.8]; Protein of unknown function (DUF815) [PF05673.15, score=19.9]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=19.2]; Phosphoribulokinase / Uridine kinase family [PF00485.20, score=18.8]; ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=18.7]} {Human: ENSG00000085563, ABCB1, ATP binding cassette subfamily B member 1, [RH, Score=1188, Expect=0.0]; ENSG00000005471, ABCB4, ATP binding cassette subfamily B member 4, [RH, Score=1144, Expect=0.0]} {Mouse: ENSMUSG00000028970, Abcb1b, ATP-binding cassette, sub-family B (MDR/TAP), member 1B, [RH, Score=1180, Expect=0.0]; ENSMUSG00000040584, Abcb1a, ATP-binding cassette, sub-family B (MDR/TAP), member 1A, [RH, Score=1176, Expect=0.0]; ENSMUSG00000042476, Abcb4, ATP-binding cassette, sub-family B (MDR/TAP), member 4, [RH, Score=1139, Expect=0.0]} {Dmel: FBgn0010241, Mdr50, Multi drug resistance 50, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00004003, pgp-9, P-GlycoProtein related, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_4124_0_1, dd_Smed_v6_4124_0_1, [RH, Score=1009, Expect=0.0]} {RNA1509_1034, RNA1509_43495, RNA1509_48254} {RNA1310_1064, RNA1509_43495, RNA1509_48254} {RNA1509_43495, RNA1509_48254, RNA815_387.1}