Data search
Results for MligTC455_40958
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_40958 | 999 | 20.82 | Mlig455_024983, Mlig455_024998 | Neo: - Age: Down-Down-Up Region-enriched R6: 2.580/0.00231 Regeneration-downregulated BL: -2.721 Regeneration-depleted BL: -2.721 |
Mlig455_024983 {REF} {Length: 2295} {RNA1509_37220} {RNA1310_39044, RNA1509_37220} {RNA1509_37220, RNA815_24613.1} Mlig455_024998 {REF} {Length: 3083} {RNA1509_37220} {RNA1310_39044} {RNA815_24613.1} |
Cumulative graph for MligTC455_40958
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.897 | 4.624 | 0.00863 | 0.27464 | |
| RegionR2 | 1.686 | 4.624 | 0.03556 | 0.21726 | |
| RegionR3 | 1.825 | 4.624 | 0.00674 | 0.11672 | |
| RegionR4 | -0.657 | 4.624 | 0.96862 | 1.00000 | |
| RegionR5 | -0.993 | 4.624 | 0.98617 | 1.00000 | |
| RegionR6 | 2.58 | 4.624 | 0.00002 | 0.00231 | |
| RegionR7 | 2.463 | 4.624 | 0.00004 | 0.00264 | |
| RegionR8 | 0.994 | 4.624 | 0.28061 | 0.90648 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.051 | 4.624 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.575 | 4.624 | 0.30052 | 0.74224 | |
| RegenerationR3 | -0.459 | 4.624 | 0.43331 | 0.82306 | |
| RegenerationR4 | 0.409 | 4.624 | 0.54899 | 0.89226 | |
| RegenerationR5 | 0.431 | 4.624 | 0.50855 | 0.86308 | |
| RegenerationR6 | -0.939 | 4.624 | 0.10212 | 0.39566 | |
| RegenerationBL | -2.721 | 4.624 | 0.00014 | 0.00570 | Specific for BL: -2.721 |
| RegenerationTP | 0.215 | 4.624 | 0.71311 | 1.00000 |
Genes with expression patterns similar to MligTC455_40958
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_40958 | 999 | 20.82 | Mlig455_024983, Mlig455_024998 | Neo: - Age: Down-Down-Up Region-enriched R6: 2.580/0.00231 Regeneration-downregulated BL: -2.721 Regeneration-depleted BL: -2.721 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024983 {REF} {Length: 2295} {RNA1509_37220} {RNA1310_39044, RNA1509_37220} {RNA1509_37220, RNA815_24613.1} Mlig455_024998 {REF} {Length: 3083} {RNA1509_37220} {RNA1310_39044} {RNA815_24613.1} |
|
| 2. | MligTC455_42411 | 5112 | 106.49 | Mlig455_037749, Mlig455_069924 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.305 Region-enriched R7: 2.512/0.00000 Regeneration-downregulated BL: -5.066 Regeneration-depleted BL: -5.066 |
3.321 | - | 0.757 | - | 0.879 | 0.735 | 0.950 | Mlig455_037749 {REF} {Length: 848} {RNA1509_19098} {RNA1310_50833.1} {RNA815_26505} Mlig455_069924 {REF} {Length: 848} {RNA1509_13149, RNA1509_19098} {RNA1310_50833.1, RNA1509_13149, RNA1509_19098} {RNA1509_13149, RNA1509_19098, RNA815_26505} |
|
| 3. | MligTC455_30985 | 442 | 9.22 | Mlig455_010824 | Neo: - Age: Down-Up-Down Region-enriched R7: 2.207/0.00023 Regeneration-downregulated BL: -3.092 Regeneration-depleted BL: -3.092 |
2.487 | - | 0.809 | - | 0.954 | 0.724 | - | Mlig455_010824 {REF} {Length: 2717} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=178.4]; Family of unknown function (DUF5641) [PF18701.3, score=106.4]; Integrase zinc binding domain [PF17921.3, score=34.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=32.6]} {Celegans: WBGene00044435, Y20F4.8, [Score=64.7, Expect=9e-11]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [RH, Score=119, Expect=5e-31]} {RNA1509_9219} {RNA1310_468} {RNA815_355.1} | |
| 4. | MligTC455_53166 | 216 | 4.5 | Mlig455_040159 | Neo: - Age: - |
PCDH9 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_040159 {REF} {Length: 4572} {Pfam: Cadherin domain [PF00028.19, score=274.8]; Cadherin-like [PF08266.14, score=39.0]; Cadherin-like [PF16184.7, score=26.4]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [RH, Score=332, Expect=1e-95]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [RH, Score=321, Expect=2e-91]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [RH, Score=319, Expect=9e-91]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [RH, Score=332, Expect=1e-95]} {Dmel: FBgn0261574, kug, kugelei, [Score=216, Expect=1e-56]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=216, Expect=6e-57]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=285, Expect=2e-81]} {RNA1509_52268} {RNA1310_13234.1} {RNA815_20861} |
| 5. | MligTC455_23781 | 123 | 2.56 | Mlig455_009520 | Neo: - Age: - |
TRPC6 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_009520 {REF} {Length: 5364} {Pfam: Transient receptor ion channel II [PF08344.13, score=91.9]; Ion transport protein [PF00520.33, score=53.7]; Ankyrin repeats (3 copies) [PF12796.9, score=32.0]; Ankyrin repeat [PF13606.8, score=26.1]; Ankyrin repeat [PF00023.32, score=21.7]} {Human: ENSG00000137672, TRPC6, transient receptor potential cation channel subfamily C member 6, [Score=519, Expect=5e-166]; ENSG00000138741, TRPC3, transient receptor potential cation channel subfamily C member 3, [Score=517, Expect=2e-165]; ENSG00000069018, TRPC7, transient receptor potential cation channel subfamily C member 7, [Score=517, Expect=5e-166]} {Mouse: ENSMUSG00000021541, Trpc7, transient receptor potential cation channel, subfamily C, member 7, [Score=519, Expect=4e-167]; ENSMUSG00000027716, Trpc3, transient receptor potential cation channel, subfamily C, member 3, [Score=513, Expect=3e-164]; ENSMUSG00000031997, Trpc6, transient receptor potential cation channel, subfamily C, member 6, [Score=512, Expect=2e-163]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=459, Expect=7e-142]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=441, Expect=5e-136]} {Smed: dd_Smed_v6_13048_0_2, dd_Smed_v6_13048_0_2, [RH, Score=1273, Expect=0.0]} {RNA1509_39636} {RNA1310_4675} {RNA815_13507.1} |
| 6. | MligTC455_47187 | 163 | 3.4 | Mlig455_065053 | Neo: - Age: - Region-enriched R2: 3.157/0.01854 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_065053 {REF} {Length: 3229} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.0]} {Smed: dd_Smed_v6_21592_0_1, dd_Smed_v6_21592_0_1, [RH, Score=63.2, Expect=8e-11]} {RNA1509_28827} {RNA1310_43256} {RNA815_16925} |
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