TomoSeq data search

Data search

Results for MligTC455_40976

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_40976	7762	161.71	Mlig455_019490	Neo: Neoblast Age: - Regeneration-upregulated BL: 1.075 Regeneration-enriched BL: 1.075	HNRNPA2B1	Mlig455_019490 {REF} {Length: 1512} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=123.0]; RNA recognition motif [PF16367.7, score=43.8]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=1e-61]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=196, Expect=3e-60]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=2e-62]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=191, Expect=3e-58]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=194, Expect=3e-58]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=245, Expect=4e-80]} {RNA1509_42940} {RNA1310_35523} {RNA815_15913.3}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40976

7762

161.71

Mlig455_019490

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 1.075

Regeneration-enriched BL: 1.075

HNRNPA2B1

Mlig455_019490 {REF} {Length: 1512} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=123.0]; RNA recognition motif [PF16367.7, score=43.8]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=1e-61]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=196, Expect=3e-60]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=2e-62]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=191, Expect=3e-58]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=194, Expect=3e-58]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=245, Expect=4e-80]} {RNA1509_42940} {RNA1310_35523} {RNA815_15913.3}

Cumulative graph for MligTC455_40976

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.324	7.405	0.47091	1.00000
RegionR2	-0.276	7.405	0.28793	0.67607
RegionR3	-0.147	7.405	0.50430	0.99607
RegionR4	0.729	7.405	0.00371	0.02873
RegionR5	0.128	7.405	0.54283	0.90534
RegionR6	0.186	7.405	0.39275	0.96702
RegionR7	0.265	7.405	0.26877	0.89992
RegionR8	-0.561	7.405	0.07535	0.52354

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.067	7.405	0.90729	1.00000
RegenerationR2	0.475	7.405	0.06366	0.41326
RegenerationR3	0.608	7.405	0.02453	0.28249
RegenerationR4	0.343	7.405	0.21399	0.66039
RegenerationR5	0.917	7.405	0.00047	0.03560
RegenerationR6	0.955	7.405	0.00030	0.01702
RegenerationBL	1.075	7.405	0.00001	0.00061	Specific for BL: 1.075
RegenerationTP	0.391	7.405	0.16087	0.58960

Genes with expression patterns similar to MligTC455_40976

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40976	7762	161.71	Mlig455_019490	Neo: Neoblast Age: - Regeneration-upregulated BL: 1.075 Regeneration-enriched BL: 1.075	HNRNPA2B1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019490 {REF} {Length: 1512} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=123.0]; RNA recognition motif [PF16367.7, score=43.8]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=1e-61]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=196, Expect=3e-60]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=201, Expect=2e-62]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=191, Expect=3e-58]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=194, Expect=3e-58]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=245, Expect=4e-80]} {RNA1509_42940} {RNA1310_35523} {RNA815_15913.3}
2.	MligTC455_39610	1457	30.36	Mlig455_029565, Mlig455_040446	Neo: - Age: -	ABLIM1	0.961	-	-	-	0.961	-	-	Mlig455_029565 {REF} {Length: 3783} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0051352, Unc-115a, Uncoordinated 115a, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.3, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=175, Expect=7e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510} Mlig455_040446 {REF} {Length: 4243} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=4e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0260463, Unc-115b, Uncoordinated 115b, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=176, Expect=3e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510}
3.	MligTC455_39949	78	1.63	Mlig455_062594	Neo: - Age: Down-Up-Down		0.954	-	-	-	-	-	0.954	Mlig455_062594 {REF} {Length: 1930} {NoTransDecoderORF} {RNA1310_17694.1} {RNA815_30420}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_40976

7762

161.71

Mlig455_019490

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 1.075

Regeneration-enriched BL: 1.075

HNRNPA2B1

1.000

MligTC455_39610

1457

30.36

Mlig455_029565, Mlig455_040446

Neo: -

Age: -

ABLIM1

0.961

Mlig455_029565 {REF} {Length: 3783} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0051352, Unc-115a, Uncoordinated 115a, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.3, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=175, Expect=7e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510}

Mlig455_040446 {REF} {Length: 4243} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=4e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0260463, Unc-115b, Uncoordinated 115b, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=176, Expect=3e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510}

MligTC455_39949

1.63

Mlig455_062594

Neo: -

Age: Down-Up-Down

0.954

Mlig455_062594 {REF} {Length: 1930} {NoTransDecoderORF} {RNA1310_17694.1} {RNA815_30420}