M. lignano Tomo-Seq
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Results for MligTC455_41007

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41007 9880 205.83 Mlig455_034981

Neo: -

Age: logFC(26M/2M)=0.192

 CHCHD10 Mlig455_034981 {REF} {Length: 796} {TRANSSPLICED} {Pfam: Uncharacterized protein conserved in bacteria (DUF2076) [PF09849.11, score=29.2]; CHCH domain [PF06747.15, score=23.6]} {Human: ENSG00000250479, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=84.0, Expect=5e-21]; ENSG00000273607, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=84.0, Expect=5e-21]} {Mouse: ENSMUSG00000070493, Chchd2, coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=84.3, Expect=3e-21]} {Dmel: FBgn0260747, Chchd2, Coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=63.5, Expect=4e-13]} {Celegans: WBGene00007630, har-1, Hemiasterlin resistant protein 1, [RH, Score=83.6, Expect=4e-21]} {RNA1509_3802} {RNA1310_44308.1} {RNA815_20448}

Cumulative graph for MligTC455_41007

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.345 7.771 0.00081 0.09591
RegionR2 -0.365 7.771 0.16187 0.50382
RegionR3 0.402 7.771 0.06381 0.44620
RegionR4 0.999 7.771 0.00004 0.00068
RegionR5 0.436 7.771 0.03930 0.15743
RegionR6 0.411 7.771 0.06081 0.46286
RegionR7 0.094 7.771 0.68079 1.00000
RegionR8 -0.632 7.771 0.01993 0.27380

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.056 7.771 0.91310 1.00000
RegenerationR2 -0.318 7.771 0.24697 0.69444
RegenerationR3 -0.268 7.771 0.33895 0.76324
RegenerationR4 -0.471 7.771 0.10239 0.49479
RegenerationR5 -0.141 7.771 0.60989 0.91418
RegenerationR6 -0.243 7.771 0.38521 0.72568
RegenerationBL 0.016 7.771 0.94986 1.00000
RegenerationTP -0.038 7.771 0.88913 1.00000


Genes with expression patterns similar to MligTC455_41007

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41007 9880 205.83 Mlig455_034981

Neo: -

Age: logFC(26M/2M)=0.192

 CHCHD10 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_034981 {REF} {Length: 796} {TRANSSPLICED} {Pfam: Uncharacterized protein conserved in bacteria (DUF2076) [PF09849.11, score=29.2]; CHCH domain [PF06747.15, score=23.6]} {Human: ENSG00000250479, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=84.0, Expect=5e-21]; ENSG00000273607, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=84.0, Expect=5e-21]} {Mouse: ENSMUSG00000070493, Chchd2, coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=84.3, Expect=3e-21]} {Dmel: FBgn0260747, Chchd2, Coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=63.5, Expect=4e-13]} {Celegans: WBGene00007630, har-1, Hemiasterlin resistant protein 1, [RH, Score=83.6, Expect=4e-21]} {RNA1509_3802} {RNA1310_44308.1} {RNA815_20448}
2. MligTC455_41008 12176 253.67 Mlig455_053703

Neo: Int S/G2/M

Age: Down-Down-Up, logFC(26M/2M)=-0.233

 CHCHD10 4.84 0.982 0.972 0.925 0.994 0.967 - Mlig455_053703 {REF} {Length: 808} {TRANSSPLICED} {Pfam: Uncharacterized protein conserved in bacteria (DUF2076) [PF09849.11, score=31.1]; CHCH domain [PF06747.15, score=26.3]} {Human: ENSG00000273607, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=81.3, Expect=6e-20]; ENSG00000250479, CHCHD10, coiled-coil-helix-coiled-coil-helix domain containing 10, [RH, Score=81.3, Expect=6e-20]; ENSG00000106153, CHCHD2, coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=78.6, Expect=8e-19]} {Mouse: ENSMUSG00000070493, Chchd2, coiled-coil-helix-coiled-coil-helix domain containing 2, [RH, Score=85.1, Expect=2e-21]} {Dmel: FBgn0260747, Chchd2, Coiled-coil-helix-coiled-coil-helix domain containing 2, [Score=61.6, Expect=8e-13]} {Celegans: WBGene00007630, har-1, Hemiasterlin resistant protein 1, [RH, Score=82.4, Expect=1e-20]} {RNA1509_1770, RNA1509_3802, RNA1509_39984, RNA1509_4698, RNA1509_49101, RNA1509_7444, RNA1509_7672} {RNA1310_44308.1, RNA1509_1770, RNA1509_3802, RNA1509_39984, RNA1509_4698, RNA1509_49101, RNA1509_7444, RNA1509_7672} {RNA1509_1770, RNA1509_3802, RNA1509_39984, RNA1509_4698, RNA1509_49101, RNA1509_7444, RNA1509_7672, RNA815_20448}
3. MligTC455_30625 415 8.64 Mlig455_057809

Neo: -

Age: Down-Down-Up

Region-enriched R5: 3.002/0.00033
Region-enriched R4: 2.773/0.01938

 SURF2 0.953 - - - 0.953 - - Mlig455_057809 {REF} {Length: 2208} {Pfam: Surfeit locus protein 2 (SURF2) [PF05477.13, score=79.6]} {Human: ENSG00000281024, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]; ENSG00000148291, SURF2, surfeit 2, [RH, Score=63.2, Expect=3e-11]} {Mouse: ENSMUSG00000014873, Surf2, surfeit gene 2, [RH, Score=64.7, Expect=6e-12]} {Smed: dd_Smed_v6_4458_0_1, dd_Smed_v6_4458_0_1, [RH, Score=70.9, Expect=7e-15]} {RNA1509_13815} {RNA1310_31608} {RNA815_14115}
4. MligTC455_50590 680 14.16 Mlig455_020128

Neo: -

Age: logFC(26M/2M)=-0.232

 PDP1 0.953 - - - - 0.953 - Mlig455_020128 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=112.4]; Protein phosphatase 2C [PF13672.8, score=20.2]} {Human: ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [RH, Score=227, Expect=1e-67]; ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [RH, Score=222, Expect=6e-66]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [RH, Score=224, Expect=9e-67]; ENSMUSG00000048371, Pdp2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [RH, Score=220, Expect=3e-65]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [RH, Score=202, Expect=3e-59]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [RH, Score=176, Expect=9e-50]} {Smed: dd_Smed_v6_4201_0_2, dd_Smed_v6_4201_0_2, [RH, Score=263, Expect=9e-83]} {RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713} {RNA1310_10528, RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713} {RNA1509_27529, RNA1509_34993, RNA1509_42524, RNA1509_47289, RNA1509_7713, RNA815_8293}

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