Data search
Results for MligTC455_41041
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41041 | 1545 | 32.18 | Mlig455_007202 | Neo: - Age: - Region-enriched R4: 1.006/0.01729 |
SWAP70 | Mlig455_007202 {REF} {Length: 3485} {Pfam: PH domain [PF00169.31, score=27.8]} {Human: ENSG00000133789, SWAP70, switching B cell complex subunit SWAP70, [RH, Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000031015, Swap70, SWA-70 protein, [Score=55.1, Expect=2e-07]} {RNA1509_28738, RNA1509_34094, RNA1509_38592} {RNA1310_5660.1, RNA1509_28738, RNA1509_34094, RNA1509_38592} {RNA1509_28738, RNA1509_34094, RNA1509_38592, RNA815_1368.1} |
Cumulative graph for MligTC455_41041
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.803 | 5.229 | 0.33855 | 0.98413 | |
| RegionR2 | -0.762 | 5.229 | 0.02701 | 0.18505 | |
| RegionR3 | 0.211 | 5.229 | 0.43630 | 0.95354 | |
| RegionR4 | 1.006 | 5.229 | 0.00191 | 0.01729 | |
| RegionR5 | -0.204 | 5.229 | 0.45791 | 0.82023 | |
| RegionR6 | 0.149 | 5.229 | 0.59664 | 1.00000 | |
| RegionR7 | 0.389 | 5.229 | 0.24464 | 0.87152 | |
| RegionR8 | 0.015 | 5.229 | 0.97150 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.843 | 5.229 | 0.23788 | 0.96582 | |
| RegenerationR2 | 0.504 | 5.229 | 0.08164 | 0.46013 | |
| RegenerationR3 | -0.121 | 5.229 | 0.68704 | 0.94310 | |
| RegenerationR4 | -0.393 | 5.229 | 0.20439 | 0.65070 | |
| RegenerationR5 | 0.232 | 5.229 | 0.44004 | 0.82432 | |
| RegenerationR6 | 0.095 | 5.229 | 0.76161 | 0.95734 | |
| RegenerationBL | -0.022 | 5.229 | 0.94767 | 1.00000 | |
| RegenerationTP | -0.173 | 5.229 | 0.64910 | 0.98840 |
Genes with expression patterns similar to MligTC455_41041
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41041 | 1545 | 32.18 | Mlig455_007202 | Neo: - Age: - Region-enriched R4: 1.006/0.01729 |
SWAP70 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007202 {REF} {Length: 3485} {Pfam: PH domain [PF00169.31, score=27.8]} {Human: ENSG00000133789, SWAP70, switching B cell complex subunit SWAP70, [RH, Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000031015, Swap70, SWA-70 protein, [Score=55.1, Expect=2e-07]} {RNA1509_28738, RNA1509_34094, RNA1509_38592} {RNA1310_5660.1, RNA1509_28738, RNA1509_34094, RNA1509_38592} {RNA1509_28738, RNA1509_34094, RNA1509_38592, RNA815_1368.1} |
| 2. | MligTC455_32850 | 737 | 15.36 | Mlig455_026517 | Neo: - Age: - |
1.811 | - | - | - | 0.850 | 0.961 | - | Mlig455_026517 {REF} {Length: 2652} {Pfam: Plectin repeat [PF00681.22, score=24.6]} {RNA1509_45383, RNA1509_45883} {RNA1310_7758.2, RNA1509_45383} {RNA1509_45383, RNA815_9451} | |
| 3. | MligTC455_44258 | 1746 | 36.36 | Mlig455_009219, Mlig455_037090 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_009219 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: CCSMST1 family [PF15013.8, score=27.1]} {RNA1509_22298} {RNA1310_20576} {RNA815_9992.1} Mlig455_037090 {REF} {Length: 1625} {TRANSSPLICED} {Pfam: CCSMST1 family [PF15013.8, score=27.1]} {RNA1509_18213, RNA1509_22298, RNA1509_34080, RNA1509_36123, RNA1509_44114} {RNA1310_20576, RNA1509_18213, RNA1509_22298, RNA1509_34080, RNA1509_36123, RNA1509_44114} {RNA1509_18213, RNA1509_22298, RNA1509_34080, RNA1509_36123, RNA1509_44114, RNA815_9992.1} |
|
| 4. | MligTC455_25218 | 1025 | 21.35 | Mlig455_021728 | Neo: - Age: - |
APC | 0.953 | - | - | - | - | 0.953 | - | Mlig455_021728 {REF} {Length: 7056} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=36.0]; SAMP Motif [PF05924.13, score=24.0]} {Human: ENSG00000134982, APC, APC, WNT signaling pathway regulator, [RH, Score=284, Expect=4e-76]; ENSG00000115266, APC2, APC2, WNT signaling pathway regulator, [RH, Score=270, Expect=4e-72]} {Mouse: ENSMUSG00000005871, Apc, adenomatosis polyposis coli, [RH, Score=283, Expect=6e-76]; ENSMUSG00000020135, Apc2, adenomatosis polyposis coli 2, [RH, Score=272, Expect=8e-73]} {Dmel: FBgn0015589, Apc, APC-like, [RH, Score=265, Expect=2e-70]} {Celegans: WBGene00000156, apr-1, Adenomatous polyposis coli protein-related protein 1, [RH, Score=124, Expect=6e-28]} {Smed: dd_Smed_v6_6966_0_1, dd_Smed_v6_6966_0_1, [RH, Score=235, Expect=5e-62]} {RNA1509_26796, RNA1509_3590} {RNA1310_116.2, RNA1509_26796} {RNA1509_26796, RNA815_4707} |
| 5. | MligTC455_26432 | 1498 | 31.21 | Mlig455_070327 | Neo: - Age: Down-Up-Up |
0.95 | - | - | - | - | 0.950 | - | Mlig455_070327 {REF} {Length: 1200} {NoTransDecoderORF} {RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1310_49149.2, RNA1509_11441, RNA1509_19097, RNA1509_46968} {RNA1509_11441, RNA1509_19097, RNA1509_46968, RNA815_25016} |
Berezikov Lab - 2020-2021 © ERIBA