M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41183

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41183 60 1.25 Mlig455_060767

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R2: 5.396/0.02405

 SLC25A29 Mlig455_060767 {REF} {Length: 2934} {Pfam: Mitochondrial carrier protein [PF00153.29, score=77.2]} {Human: ENSG00000197119, SLC25A29, solute carrier family 25 member 29, [Score=82.4, Expect=2e-19]} {Mouse: ENSMUSG00000021265, Slc25a29, solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29, [Score=82.4, Expect=4e-19]} {Dmel: FBgn0032219, CG4995, [Score=77.4, Expect=3e-17]} {Celegans: WBGene00008320, slc-25A29, SLC (SoLute Carrier) homolog, [Score=79.0, Expect=6e-18]} {Smed: dd_Smed_v6_2449_0_1, dd_Smed_v6_2449_0_1, [Score=61.6, Expect=6e-12]} {RNA1509_46265} {RNA1310_46605, RNA1509_46265} {RNA1509_46265, RNA815_19097}

Cumulative graph for MligTC455_41183

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.784 1.712 0.99961 1.00000
RegionR2 5.396 1.712 0.00114 0.02405
RegionR3 1.222 1.712 0.43318 0.95172
RegionR4 2.247 1.712 0.11114 0.32997
RegionR5 -0.082 1.712 0.79532 1.00000
RegionR6 0.122 1.712 0.83137 1.00000
RegionR7 2.562 1.712 0.10934 0.62774
RegionR8 -2.683 1.712 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.616 1.712 0.99978 1.00000
RegenerationR2 0.743 1.712 0.47731 0.86184
RegenerationR3 3.776 1.712 0.00971 0.18006
RegenerationR4 1.202 1.712 0.26348 0.71125
RegenerationR5 2.032 1.712 0.17811 0.60690
RegenerationR6 3.817 1.712 0.03417 0.23199
RegenerationBL 3.508 1.712 0.11849 0.40752
RegenerationTP 4.375 1.712 0.05291 0.37612


Genes with expression patterns similar to MligTC455_41183

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41183 60 1.25 Mlig455_060767

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R2: 5.396/0.02405

 SLC25A29 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_060767 {REF} {Length: 2934} {Pfam: Mitochondrial carrier protein [PF00153.29, score=77.2]} {Human: ENSG00000197119, SLC25A29, solute carrier family 25 member 29, [Score=82.4, Expect=2e-19]} {Mouse: ENSMUSG00000021265, Slc25a29, solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29, [Score=82.4, Expect=4e-19]} {Dmel: FBgn0032219, CG4995, [Score=77.4, Expect=3e-17]} {Celegans: WBGene00008320, slc-25A29, SLC (SoLute Carrier) homolog, [Score=79.0, Expect=6e-18]} {Smed: dd_Smed_v6_2449_0_1, dd_Smed_v6_2449_0_1, [Score=61.6, Expect=6e-12]} {RNA1509_46265} {RNA1310_46605, RNA1509_46265} {RNA1509_46265, RNA815_19097}
2. MligTC455_22759 58 1.21 Mlig455_031858, Mlig455_031943

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.889/0.04990

 TACR2 3.566 0.755 0.873 - - 0.980 0.958

Mlig455_031858 {REF} {Length: 2775} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=104.0]} {Human: ENSG00000075073, TACR2, tachykinin receptor 2, [Score=90.1, Expect=8e-19]; ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [Score=86.7, Expect=8e-18]; ENSG00000134817, APLNR, apelin receptor, [Score=86.3, Expect=1e-17]} {Mouse: ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=92.8, Expect=6e-20]; ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [Score=89.4, Expect=7e-19]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=150, Expect=2e-39]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=124, Expect=6e-31]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=189, Expect=2e-54]} {RNA1310_31527}

Mlig455_031943 {REF} {Length: 2929} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=101.5]} {Human: ENSG00000075073, TACR2, tachykinin receptor 2, [Score=90.9, Expect=4e-19]; ENSG00000185149, NPY2R, neuropeptide Y receptor Y2, [Score=89.0, Expect=1e-18]} {Mouse: ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=93.6, Expect=3e-20]; ENSMUSG00000028004, Npy2r, neuropeptide Y receptor Y2, [Score=91.7, Expect=1e-19]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=152, Expect=2e-40]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=123, Expect=1e-30]} {Smed: dd_Smed_v6_17752_0_1, dd_Smed_v6_17752_0_1, [Score=191, Expect=2e-55]} {RNA1310_31527}
3. MligTC455_23407 56 1.16 Mlig455_000837

Neo: Germline

Age: -

Region-enriched R4: 3.808/0.04446

 DGKI 2.726 0.857 0.915 - - - 0.954 Mlig455_000837 {REF} {Length: 4065} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=424.4]; Diacylglycerol kinase accessory domain [PF00609.21, score=143.5]; Diacylglycerol kinase catalytic domain [PF00781.26, score=80.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=32.3]} {Human: ENSG00000157680, DGKI, diacylglycerol kinase iota, [Score=490, Expect=9e-155]; ENSG00000149091, DGKZ, diacylglycerol kinase zeta, [Score=478, Expect=7e-152]} {Mouse: ENSMUSG00000038665, Dgki, diacylglycerol kinase, iota, [Score=490, Expect=4e-157]; ENSMUSG00000040479, Dgkz, diacylglycerol kinase zeta, [Score=478, Expect=6e-152]} {Dmel: FBgn0261549, rdgA, retinal degeneration A, [Score=400, Expect=3e-122]} {Celegans: WBGene00019428, dgk-5, Putative diacylglycerol kinase K06A1.6, [Score=416, Expect=1e-128]} {Smed: dd_Smed_v6_13812_0_1, dd_Smed_v6_13812_0_1, [Score=447, Expect=6e-143]} {RNA1509_47663} {RNA1310_12079.2} {RNA815_4787.1}
4. MligTC455_22303 18 0.36 Mlig455_027602

Neo: -

Age: -

Regeneration-upregulated R4: 4.774

Regeneration-enriched R4: 4.774

 2.718 0.837 0.976 - - - 0.905 Mlig455_027602 {REF} {Length: 591} {NoTransDecoderORF} {RNA1310_87125} {RNA815_57491}
5. MligTC455_08648 66 1.38 Mlig455_007558, Mlig455_034861

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 5.000/0.01843

 2.68 0.794 0.951 - - - 0.935

Mlig455_007558 {REF} {Length: 1034} {Pfam: Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=26.8]; Nuclear/hormone receptor activator site AF-1 [PF11825.10, score=23.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=21.8]; Bacterial protein of unknown function (DUF948) [PF06103.13, score=21.8]; Domain of unknown function (DUF1970) [PF09301.12, score=19.8]; Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=18.7]} {RNA1310_51304} {RNA815_56810.1}

Mlig455_034861 {REF} {Length: 4166} {RNA1509_36500} {RNA1310_56224} {RNA815_39692}
6. MligTC455_18807 97 2.01 Mlig455_042665

Neo: Irradiation

Age: Up-Down-Down

 2.649 0.784 0.913 - - - 0.952 Mlig455_042665 {REF} {Length: 2239} {Pfam: LicD family [PF04991.15, score=55.7]} {Smed: dd_Smed_v6_5971_0_1, dd_Smed_v6_5971_0_1, [Score=110, Expect=1e-27]} {RNA1509_30898} {RNA1310_12458} {RNA815_10325}
7. MligTC455_35953 108 2.25 Mlig455_012116, Mlig455_023768, Mlig455_034515, Mlig455_034518, Mlig455_034565, Mlig455_060107, Mlig455_068852

Neo: Germline

Age: Down-Down-Down, logFC(26M/2M)=-0.621

Region-enriched R4: 4.196/0.00027

 2.609 0.794 0.864 - - - 0.951

Mlig455_012116 {REF} {Length: 707} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}

Mlig455_023768 {REF} {Length: 801} {Pfam: Phage integrase family [PF00589.24, score=26.0]} {RNA1509_21018} {RNA1310_25057} {RNA815_42680}

Mlig455_034515 {REF} {Length: 2351} {RNA1509_39040} {RNA1310_25057} {RNA815_4579}

Mlig455_034518 {REF} {Length: 960} {RNA1509_21018} {RNA1310_25057} {RNA815_42680}

Mlig455_034565 {REF} {Length: 486} {TRANSSPLICED} {RNA1509_39040} {RNA1310_24363} {RNA815_4579}

Mlig455_060107 {REF} {Length: 393} {NoTransDecoderORF} {RNA1509_21018} {RNA1310_48816} {RNA815_42680}

Mlig455_068852 {REF} {Length: 823} {RNA1509_21018} {RNA1310_25057} {RNA815_42680}
8. MligTC455_33225 112 2.33 Mlig455_009187, Mlig455_032394, Mlig455_058063, Mlig455_064476, Mlig455_065044

Neo: Int S/G2/M

Age: -

Region-specific R4: 5.649

Region-enriched R4: 4.283/0.00014

 2.542 0.796 - - - 0.964 0.782

Mlig455_009187 {REF} {Length: 2402} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=32.7]; MULE transposase domain [PF10551.11, score=21.9]} {RNA1509_49705} {RNA1310_56368} {RNA815_43638}

Mlig455_032394 {REF} {Length: 1667} {NoTransDecoderORF} {RNA1509_51765} {RNA1310_29265} {RNA815_42451}

Mlig455_058063 {REF} {Length: 2396} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=37.2]} {RNA1509_49705} {RNA1310_54475} {RNA815_43638}

Mlig455_064476 {REF} {Length: 1445} {RNA1509_49705} {RNA1310_60542} {RNA815_42451}

Mlig455_065044 {REF} {Length: 337} {NoTransDecoderORF} {RNA1310_47281} {RNA815_7487.1}
9. MligTC455_08126 61 1.28 Mlig455_019453

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.567/0.00165

 2.537 0.773 0.971 - - - 0.793 Mlig455_019453 {REF} {Length: 620} {RNA1509_54069} {RNA1310_34680.2} {RNA815_15951}
10. MligTC455_31999 175 3.65 Mlig455_053538, Mlig455_066438

Neo: Germline

Age: -

Region-specific R4: 5.792

Region-enriched R4: 3.631/0.00001

 FKRP 2.536 0.835 0.952 - - - 0.749

Mlig455_053538 {REF} {Length: 2081} {Pfam: LicD family [PF04991.15, score=59.2]} {Human: ENSG00000181027, FKRP, fukutin related protein, [Score=49.3, Expect=5e-06]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=48.5, Expect=5e-06]} {Smed: dd_Smed_v6_19148_0_1, dd_Smed_v6_19148_0_1, [Score=105, Expect=7e-26]} {RNA1509_48974} {RNA1310_21292} {RNA815_8600.1}

Mlig455_066438 {REF} {Length: 2032} {Pfam: LicD family [PF04991.15, score=59.9]} {Human: ENSG00000181027, FKRP, fukutin related protein, [Score=48.1, Expect=1e-05]} {Mouse: ENSMUSG00000048920, Fkrp, fukutin related protein, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_22064_0_1, dd_Smed_v6_22064_0_1, [Score=103, Expect=3e-25]} {RNA1509_48974} {RNA1310_21292, RNA1509_48974} {RNA1509_48974, RNA815_8600.1}
11. MligTC455_15144 24 0.49 Mlig455_044189

Neo: Germline

Age: Down-Up-Down

Region-enriched R4: 3.732/0.00994

 2.494 0.762 0.965 - - 0.767 - Mlig455_044189 {REF} {Length: 1011} {NoTransDecoderORF} {RNA1310_45181} {RNA815_19245}
12. MligTC455_13634 50 1.05 Mlig455_021493, Mlig455_063205, Mlig455_067378

Neo: Germline

Age: logFC(26M/2M)=0.658

Region-enriched R4: 4.418/0.04446

 2.463 0.720 0.972 - - - 0.771

Mlig455_021493 {REF} {Length: 568} {RNA1310_62662.1} {RNA815_38126}

Mlig455_063205 {REF} {Length: 577} {RNA1310_62662.1} {RNA815_38126}

Mlig455_067378 {REF} {Length: 577} {RNA1310_62662.1} {RNA815_38126}
13. MligTC455_38538 1507 31.4 Mlig455_038192, Mlig455_038383

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.678

Region-enriched R4: 4.235/0.00000

Regeneration-downregulated R4: -3.236

Regeneration-depleted R4: -3.236

 2.442 0.766 0.722 - - - 0.954

Mlig455_038192 {REF} {Length: 1237} {TRANSSPLICED} {RNA1509_15590, RNA1509_5270} {RNA1310_24113.1, RNA1509_15590, RNA1509_5270} {RNA1509_15590, RNA1509_5270, RNA815_13550}

Mlig455_038383 {REF} {Length: 1173} {TRANSSPLICED} {RNA1509_15590} {RNA1310_24113.1} {RNA815_13550}
14. MligTC455_15514 145 3.02 Mlig455_050604

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.355

Region-enriched R4: 2.082/0.02358

 MFSD4A 1.864 - 0.904 - - - 0.960 Mlig455_050604 {REF} {Length: 3347} {Human: ENSG00000174514, MFSD4A, major facilitator superfamily domain containing 4A, [RH, Score=116, Expect=7e-28]} {Mouse: ENSMUSG00000059149, Mfsd4a, major facilitator superfamily domain containing 4A, [Score=125, Expect=6e-31]} {Smed: dd_Smed_v6_10372_0_1, dd_Smed_v6_10372_0_1, [Score=142, Expect=1e-37]} {RNA1509_25745} {RNA1310_14372.1} {RNA815_696}
15. MligTC455_39205 14 0.28 Mlig455_020814

Neo: -

Age: -

 1.857 - 0.964 - - - 0.893 Mlig455_020814 {REF} {Length: 640} {RNA1509_42238} {RNA1310_15237.1} {RNA815_33632}
16. MligTC455_22558 20 0.41 Mlig455_045709

Neo: Int S/G2/M

Age: -

 1.845 - 0.959 - - - 0.886 Mlig455_045709 {REF} {Length: 897} {RNA1509_2129} {RNA1310_32796} {RNA815_14068}
17. MligTC455_33164 33 0.69 Mlig455_045293

Neo: -

Age: -

Region-enriched R4: 3.352/0.03720

 OPN4 1.832 - 0.955 - - - 0.877 Mlig455_045293 {REF} {Length: 2627} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=38.9]} {Human: ENSG00000122375, OPN4, opsin 4, [Score=49.3, Expect=9e-06]} {RNA1509_45595} {RNA1310_47354} {RNA815_31014}
18. MligTC455_10901 21 0.44 Mlig455_027323

Neo: -

Age: Down-Down-Up

 1.814 - 0.955 - - - 0.859 Mlig455_027323 {REF} {Length: 1195} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=47.4, Expect=8e-06]} {Smed: dd_Smed_v6_8375_0_1, dd_Smed_v6_8375_0_1, [Score=48.5, Expect=3e-06]} {RNA1509_14818} {RNA1310_51436} {RNA815_25981.1}
19. MligTC455_29802 143 2.98 Mlig455_062593

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.287

Region-specific R4: 5.489

 SCNN1G 1.808 - 0.955 - - - 0.853 Mlig455_062593 {REF} {Length: 3508} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=186.2]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=60.5, Expect=5e-09]; ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=60.5, Expect=6e-09]; ENSG00000072182, ASIC4, acid sensing ion channel subunit family member 4, [Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=64.3, Expect=2e-10]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=50.8, Expect=3e-06]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=96.3, Expect=9e-21]} {RNA1509_47645} {RNA1310_11333.1} {RNA815_9471.1}
20. MligTC455_28642 113 2.35 Mlig455_006800

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.561

Region-specific R4: 5.745

Region-enriched R4: 2.782/0.04853

 SCNN1B 1.798 - 0.951 - - - 0.847 Mlig455_006800 {REF} {Length: 4042} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=52.4, Expect=1e-06]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=53.5, Expect=4e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=64.3, Expect=7e-11]} {RNA1509_47645} {RNA1310_37377} {RNA815_9471.1}
21. MligTC455_04517 28 0.57 Mlig455_025173, Mlig455_025184

Neo: -

Age: logFC(26M/2M)=1.043

 PRR9 1.791 0.841 0.950 - - - -

Mlig455_025173 {REF} {Length: 3203} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=1e-05]} {RNA1509_54738} {RNA1310_57001.1} {RNA815_46717}

Mlig455_025184 {REF} {Length: 845} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.0, Expect=2e-06]} {RNA1310_66346}
22. MligTC455_10192 32 0.67 Mlig455_009611

Neo: Germline

Age: -

 1.784 - 0.958 - - - 0.826 Mlig455_009611 {REF} {Length: 809} {RNA1509_57954} {RNA1310_75892} {RNA815_30656}
23. MligTC455_53735 124 2.58 Mlig455_043944, Mlig455_044023

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R2: 4.522/0.00648

 1.78 - 0.830 - - - 0.950

Mlig455_043944 {REF} {Length: 4237} {RNA1509_45477} {RNA1310_32327} {RNA815_37449}

Mlig455_044023 {REF} {Length: 3658} {RNA1509_45477} {RNA1310_32327} {RNA815_32136}
24. MligTC455_20595 92 1.91 Mlig455_025260

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R7: 4.060/0.02252

 1.776 - 0.952 - - - 0.824 Mlig455_025260 {REF} {Length: 6361} {Pfam: Tape measure protein [PF20155.1, score=26.5]; Putative antitoxin [PF02697.16, score=21.5]} {RNA1509_49426} {RNA1310_1402} {RNA815_2476.1}
25. MligTC455_07251 14 0.29 Mlig455_062029, Mlig455_063233

Neo: -

Age: -

 1.769 - 0.952 - - - 0.817

Mlig455_062029 {REF} {Length: 880} {NoTransDecoderORF} {RNA1509_59965} {RNA1310_40914} {RNA815_52158}

Mlig455_063233 {REF} {Length: 118} {NoTransDecoderORF} {RNA1310_26979}
26. MligTC455_21587 453 9.43 Mlig455_029279

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.611

Regeneration-downregulated R4: -3.076

Regeneration-depleted R4: -3.076

 GPCPD1 1.758 - 0.951 - - - 0.807 Mlig455_029279 {REF} {Length: 2262} {Pfam: Glycerophosphoryl diester phosphodiesterase family [PF03009.19, score=125.6]} {Human: ENSG00000125772, GPCPD1, glycerophosphocholine phosphodiesterase 1, [Score=107, Expect=5e-25]} {Mouse: ENSMUSG00000027346, Gpcpd1, glycerophosphocholine phosphodiesterase 1, [Score=104, Expect=9e-25]} {Dmel: FBgn0031566, CG2818, [Score=92.4, Expect=1e-20]} {Celegans: WBGene00011511, gpcp-2, Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 2, [Score=90.5, Expect=5e-20]} {Smed: dd_Smed_v6_7518_0_2, dd_Smed_v6_7518_0_2, [Score=99.8, Expect=7e-24]} {RNA1509_57811} {RNA1310_28682.1} {RNA815_14999.3}
27. MligTC455_14806 40 0.84 Mlig455_045389, Mlig455_045484

Neo: -

Age: -

 1.716 - 0.761 - - - 0.955

Mlig455_045389 {REF} {Length: 988} {RNA1509_19845} {RNA1310_2278.1} {RNA815_46842}

Mlig455_045484 {REF} {Length: 950} {RNA1509_19845} {RNA1310_2278.1} {RNA815_46842}
28. MligTC455_31700 61 1.27 Mlig455_029534, Mlig455_043006, Mlig455_043044, Mlig455_043060

Neo: Germline

Age: Up-Down-Down

 1.688 0.727 0.961 - - - -

Mlig455_029534 {REF} {Length: 233} {NoTransDecoderORF} {RNA1310_141162}

Mlig455_043006 {REF} {Length: 2891} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=71.6, Expect=7e-14]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331}

Mlig455_043044 {REF} {Length: 2804} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=70.1, Expect=2e-13]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331}

Mlig455_043060 {REF} {Length: 3069} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=71.2, Expect=8e-14]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331}
29. MligTC455_08848 220 4.58 Mlig455_014383

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R4: 2.812/0.00936

 1.677 - 0.710 - - - 0.967 Mlig455_014383 {REF} {Length: 4093} {Pfam: SacI homology domain [PF02383.20, score=69.1]} {RNA1509_57354} {RNA1310_29279.1, RNA1509_57354} {RNA1509_57354, RNA815_6877.1}
30. MligTC455_43984 91 1.9 Mlig455_041471

Neo: -

Age: -

 ENTPD5 0.991 - - - - 0.991 - Mlig455_041471 {REF} {Length: 3234} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=158.7]} {Human: ENSG00000187097, ENTPD5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=129, Expect=3e-32]} {Mouse: ENSMUSG00000021236, Entpd5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=123, Expect=5e-30]; ENSMUSG00000033068, Entpd6, ectonucleoside triphosphate diphosphohydrolase 6, [Score=122, Expect=1e-29]} {Dmel: FBgn0024947, NTPase, [Score=120, Expect=5e-29]} {Celegans: WBGene00016380, ntp-1, Nucleoside-triphosphatase ntp-1, [Score=106, Expect=3e-24]} {Smed: dd_Smed_v6_8855_0_2, dd_Smed_v6_8855_0_2, [Score=117, Expect=3e-28]} {RNA1509_36246} {RNA1310_11342} {RNA815_29784}
31. MligTC455_43913 72 1.5 Mlig455_024349, Mlig455_024466

Neo: Germline

Age: -

 PRKACB 0.979 - 0.979 - - - -

Mlig455_024349 {REF} {Length: 3006} {Pfam: Protein kinase domain [PF00069.27, score=107.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=59.1]; Kinase-like [PF14531.8, score=19.8]} {Human: ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [Score=117, Expect=1e-29]; ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [Score=115, Expect=4e-29]} {Mouse: ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [Score=117, Expect=1e-29]; ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [Score=116, Expect=2e-29]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [Score=111, Expect=1e-27]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [Score=109, Expect=3e-27]} {Smed: dd_Smed_v6_911_0_1, dd_Smed_v6_911_0_1, [Score=107, Expect=2e-26]} {RNA1509_55743} {RNA1310_17475, RNA1509_55743} {RNA1509_55743, RNA815_30783}

Mlig455_024466 {REF} {Length: 3591} {Pfam: Protein kinase domain [PF00069.27, score=109.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=61.6]; Kinase-like [PF14531.8, score=18.6]} {Human: ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [Score=129, Expect=2e-32]; ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [Score=126, Expect=1e-31]} {Mouse: ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [Score=127, Expect=4e-32]; ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [Score=127, Expect=4e-32]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [Score=124, Expect=4e-31]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [Score=118, Expect=4e-29]} {Smed: dd_Smed_v6_2413_0_1, dd_Smed_v6_2413_0_1, [Score=117, Expect=7e-29]} {RNA1509_55743} {RNA1310_17475} {RNA815_30783}
32. MligTC455_14407 7 0.15 Mlig455_042217

Neo: -

Age: -

 0.967 - 0.967 - - - - Mlig455_042217 {REF} {Length: 487} {NoTransDecoderORF} {RNA1310_1284} {RNA815_49072}
33. MligTC455_01436 38 0.8 Mlig455_007181

Neo: -

Age: -

 0.966 - 0.966 - - - - Mlig455_007181 {REF} {Length: 395} {NoTransDecoderORF} {RNA1509_40970} {RNA1310_35197} {RNA815_17915}
34. MligTC455_36132 41 0.86 Mlig455_069660

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.522

 0.957 - - - - 0.957 - Mlig455_069660 {REF} {Length: 4786} {RNA1509_50856} {RNA1310_3723} {RNA815_27362}
35. MligTC455_33579 338 7.03 Mlig455_040258

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 3.940

Region-enriched R4: 2.544/0.00122

 0.951 - 0.951 - - - - Mlig455_040258 {REF} {Length: 1449} {TRANSSPLICED} {Smed: dd_Smed_v6_12004_0_1, dd_Smed_v6_12004_0_1, [RH, Score=104, Expect=7e-27]} {RNA1509_4846} {RNA1310_30668} {RNA815_15892.1}
36. MligTC455_21588 660 13.76 Mlig455_058881

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.789

Region-enriched R4: 2.871/0.00593

 GPCPD1 0.95 - 0.950 - - - - Mlig455_058881 {REF} {Length: 1886} {Pfam: Glycerophosphoryl diester phosphodiesterase family [PF03009.19, score=122.5]} {Human: ENSG00000125772, GPCPD1, glycerophosphocholine phosphodiesterase 1, [Score=102, Expect=3e-23]} {Mouse: ENSMUSG00000027346, Gpcpd1, glycerophosphocholine phosphodiesterase 1, [Score=99.4, Expect=2e-22]} {Dmel: FBgn0031566, CG2818, [Score=88.2, Expect=8e-19]} {Celegans: WBGene00011511, gpcp-2, Putative glycerophosphocholine phosphodiesterase GPCPD1 homolog 2, [Score=84.7, Expect=1e-17]} {Smed: dd_Smed_v6_7518_0_4, dd_Smed_v6_7518_0_4, [Score=98.2, Expect=6e-23]} {RNA1509_57811} {RNA1310_28682.1} {RNA815_14999.3}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA