M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_41185

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41185 27 0.57 Mlig455_017151

Neo: -

Age: -

 Mlig455_017151 {REF} {Length: 1119} {RNA1509_24817} {RNA1310_35313.1} {RNA815_16960}

Cumulative graph for MligTC455_41185

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.402 0.863 0.99924 1.00000
RegionR2 1.113 0.863 0.99978 1.00000
RegionR3 1.027 0.863 0.99967 1.00000
RegionR4 0.039 0.863 0.99932 1.00000
RegionR5 1.024 0.863 0.99958 1.00000
RegionR6 1.155 0.863 0.99966 1.00000
RegionR7 0.054 0.863 0.99997 1.00000
RegionR8 -1.012 0.863 0.99954 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.119 0.863 0.99927 1.00000
RegenerationR2 2.748 0.863 0.31206 0.75201
RegenerationR3 3.295 0.863 0.24047 0.67545
RegenerationR4 3.28 0.863 0.22917 0.67848
RegenerationR5 4.658 0.863 0.14391 0.55892
RegenerationR6 4.489 0.863 0.32455 0.67072
RegenerationBL 0.162 0.863 0.99924 1.00000
RegenerationTP 3.488 0.863 0.37238 0.80977


Genes with expression patterns similar to MligTC455_41185

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41185 27 0.57 Mlig455_017151

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_017151 {REF} {Length: 1119} {RNA1509_24817} {RNA1310_35313.1} {RNA815_16960}
2. MligTC455_15772 74 1.54 Mlig455_041878

Neo: -

Age: Down-Up-Down

 0.985 - - - - 0.985 - Mlig455_041878 {REF} {Length: 1377} {NoTransDecoderORF} {RNA1509_50940} {RNA1310_73125, RNA1509_50940} {RNA1509_50940, RNA815_34902.1}
3. MligTC455_02144 16 0.33 Mlig455_005342, Mlig455_067576

Neo: Int S/G2/M

Age: -

 0.983 - - - - 0.983 -

Mlig455_005342 {REF} {Length: 1175} {NoTransDecoderORF} {RNA1509_28028} {RNA1310_69663}

Mlig455_067576 {REF} {Length: 981} {NoTransDecoderORF} {RNA1310_69663}
4. MligTC455_04124 122 2.54 Mlig455_040718

Neo: -

Age: Up-Down-Down

Region-enriched R6: 8.532/0.00000

 0.979 - - - - - 0.979 Mlig455_040718 {REF} {Length: 899} {RNA1310_52827} {RNA815_44082}
5. MligTC455_07243 5 0.1 Mlig455_059940

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_059940 {REF} {Length: 716} {Pfam: Poly(hydroxyalcanoate) granule associated protein (phasin) [PF05597.13, score=19.7]; Dynamin GTPase effector domain [PF02212.20, score=19.3]} {RNA1310_9825} {RNA815_13518}
6. MligTC455_41600 661 13.78 Mlig455_010948, Mlig455_033139

Neo: -

Age: -

Region-enriched R6: 2.093/0.00540

 ECE1, MMEL1 0.976 - - - - - 0.976

Mlig455_010948 {REF} {Length: 3004} {TRANSSPLICED} {Pfam: Peptidase family M13 [PF05649.15, score=69.7]} {Human: ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=89.7, Expect=3e-19]; ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=89.7, Expect=3e-19]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=88.2, Expect=1e-18]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=87.8, Expect=2e-18]} {Mouse: ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=85.5, Expect=7e-18]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=84.7, Expect=1e-17]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=76.3, Expect=6e-15]} {Celegans: WBGene00017842, nep-12, NEPrilysin metallopeptidase family, [Score=88.6, Expect=3e-19]} {RNA1509_35151} {RNA1310_2116.1} {RNA815_5780}

Mlig455_033139 {REF} {Length: 3097} {TRANSSPLICED} {Pfam: Peptidase family M13 [PF05649.15, score=243.6]; Peptidase family M13 [PF01431.23, score=218.8]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [RH, Score=438, Expect=5e-142]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [RH, Score=429, Expect=2e-138]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [RH, Score=427, Expect=2e-136]} {Mouse: ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [RH, Score=437, Expect=6e-142]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [RH, Score=421, Expect=1e-135]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [RH, Score=420, Expect=2e-133]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [RH, Score=415, Expect=4e-133]} {Celegans: WBGene00017557, nep-11, Neprilysin-11, [RH, Score=335, Expect=4e-102]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [RH, Score=347, Expect=2e-107]} {RNA1509_10322, RNA1509_35151} {RNA1310_2116.1, RNA1509_10322, RNA1509_35151} {RNA1509_10322, RNA1509_35151, RNA815_5780}
7. MligTC455_08858 195 4.07 Mlig455_058112

Neo: -

Age: -

Regeneration-enriched R5: 4.501
Regeneration-enriched R6: 4.064

 0.975 - - - - - 0.975 Mlig455_058112 {REF} {Length: 1662} {RNA1509_26637} {RNA1310_27547} {RNA815_16487}
8. MligTC455_13874 20 0.41 Mlig455_070283

Neo: -

Age: -

Regeneration-enriched R4: 5.837
Regeneration-enriched R5: 4.288

 0.975 - - - - - 0.975 Mlig455_070283 {REF} {Length: 885} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=30.6]} {Smed: dd_Smed_v6_9429_0_1, dd_Smed_v6_9429_0_1, [Score=66.6, Expect=1e-13]} {RNA1310_77320}
9. MligTC455_14377 210 4.37 Mlig455_022946, Mlig455_046360, Mlig455_046393

Neo: -

Age: logFC(26M/2M)=-0.362

Region-enriched R6: 6.942/0.00000

 0.975 - - - - - 0.975

Mlig455_022946 {REF} {Length: 170} {NoTransDecoderORF} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_14861.1} {RNA815_5114}

Mlig455_046360 {REF} {Length: 1953} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_13935.1} {RNA815_5114}

Mlig455_046393 {REF} {Length: 1824} {tRNA: Arg(ACG), score=72.3} {RNA1509_29923} {RNA1310_14861.1} {RNA815_5114}
10. MligTC455_14527 62 1.29 Mlig455_051309

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_051309 {REF} {Length: 3672} {Pfam: Zinc-binding domain [PF13695.8, score=76.4]} {Smed: dd_Smed_v6_4477_0_1, dd_Smed_v6_4477_0_1, [Score=75.5, Expect=2e-15]} {RNA1509_19264} {RNA1310_17898.1} {RNA815_11627}
11. MligTC455_07922 75 1.56 Mlig455_035625

Neo: -

Age: Down-Up-Down

Region-enriched R6: 5.372/0.00007

 OSR1 0.969 - - - - - 0.969 Mlig455_035625 {REF} {Length: 1029} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.1]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.8]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=179, Expect=2e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=174, Expect=7e-53]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=178, Expect=5e-55]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=174, Expect=4e-53]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=4e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=172, Expect=6e-53]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=4e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1}
12. MligTC455_30756 66 1.36 Mlig455_031771, Mlig455_054714

Neo: -

Age: logFC(26M/2M)=-0.696

 ANK1 0.969 - - - - - 0.969

Mlig455_031771 {REF} {Length: 3793} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=184.4]; Ankyrin repeat [PF00023.32, score=135.6]; Ankyrin repeats (many copies) [PF13637.8, score=126.2]; Ankyrin repeat [PF13606.8, score=121.3]; Ankyrin repeats (many copies) [PF13857.8, score=105.1]; Mab-21 protein [PF03281.16, score=32.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=19.9]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=155, Expect=1e-37]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=159, Expect=2e-39]} {Dmel: FBgn0031473, CG3104, [Score=156, Expect=7e-42]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=150, Expect=1e-36]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=147, Expect=1e-35]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}

Mlig455_054714 {REF} {Length: 4487} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=443.9]; Ankyrin repeat [PF00023.32, score=286.8]; Ankyrin repeats (many copies) [PF13637.8, score=245.9]; Ankyrin repeats (many copies) [PF13857.8, score=223.5]; Ankyrin repeat [PF13606.8, score=222.5]; Glutamine amidotransferase domain [PF13537.8, score=32.6]; Mab-21 protein [PF03281.16, score=31.6]; PEGA domain [PF08308.13, score=26.0]; Nucleoplasmin/nucleophosmin domain [PF03066.17, score=23.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=265, Expect=7e-72]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=257, Expect=2e-69]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=248, Expect=3e-66]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=237, Expect=3e-67]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=258, Expect=4e-70]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=255, Expect=4e-69]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
13. MligTC455_10783 1478 30.8 Mlig455_060175, Mlig455_067097

Neo: -

Age: -

Region-specific R6: 6.992

Region-enriched R6: 7.314/0.00000

 0.968 - - - - - 0.968

Mlig455_060175 {REF} {Length: 2859} {Pfam: Laminin G domain [PF02210.26, score=28.4]; Laminin G domain [PF00054.25, score=24.7]; EGF-like domain [PF00008.29, score=20.0]} {RNA1509_31734} {RNA1310_13948} {RNA815_11891}

Mlig455_067097 {REF} {Length: 2968} {Pfam: Laminin G domain [PF02210.26, score=28.8]; Laminin G domain [PF00054.25, score=25.3]; EGF-like domain [PF00008.29, score=23.3]} {RNA1509_31734, RNA1509_37460} {RNA1310_13948, RNA1509_31734, RNA1509_37460} {RNA1509_31734, RNA1509_37460, RNA815_11891}
14. MligTC455_08421 19 0.4 Mlig455_049304

Neo: -

Age: -

 TOGARAM1 0.966 - - - - 0.966 - Mlig455_049304 {REF} {Length: 6458} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=25.7]; CLASP N terminal [PF12348.10, score=21.8]; HEAT repeat [PF02985.24, score=21.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [Score=209, Expect=2e-53]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [Score=210, Expect=5e-54]} {Dmel: FBgn0259818, CG42399, [Score=113, Expect=1e-24]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=123, Expect=3e-28]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=210, Expect=2e-54]} {RNA1509_21714} {RNA1310_5410.1} {RNA815_4279.1}
15. MligTC455_25343 28 0.59 Mlig455_003011

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_003011 {REF} {Length: 3854} {TRANSSPLICED} {Dmel: FBgn0029697, CG15570, [Score=51.6, Expect=2e-06]} {RNA1509_54202} {RNA1310_5109} {RNA815_16616}
16. MligTC455_21395 60 1.25 Mlig455_048524

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_048524 {REF} {Length: 2046} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=27.3]} {RNA1310_102808} {RNA815_55644}
17. MligTC455_10521 17 0.36 Mlig455_014391

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_014391 {REF} {Length: 1313} {RNA1509_36146} {RNA1310_32605} {RNA815_14202}
18. MligTC455_36169 656 13.67 Mlig455_017700, Mlig455_041728, Mlig455_042070

Neo: -

Age: -

Region-enriched R6: 9.529/0.00000

 GHSR 0.963 - - - - - 0.963

Mlig455_017700 {REF} {Length: 1487} {Pfam: Immunoglobulin domain [PF13927.8, score=57.0]; Immunoglobulin domain [PF13895.8, score=52.9]; Immunoglobulin I-set domain [PF07679.18, score=43.3]; Immunoglobulin domain [PF00047.27, score=25.6]; Fibronectin type III domain [PF00041.23, score=19.3]}

Mlig455_041728 {REF} {Length: 4229} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=72.5]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=19.9]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=61.6, Expect=9e-10]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=67.4, Expect=9e-12]} {Dmel: FBgn0038874, ETHR, [Score=47.8, Expect=1e-05]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_15630_0_1, dd_Smed_v6_15630_0_1, [Score=75.9, Expect=7e-15]} {RNA1509_34672} {RNA1310_14573, RNA1509_34672} {RNA1509_34672, RNA815_16880}

Mlig455_042070 {REF} {Length: 3667} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=71.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.0]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.9]; Caenorhabditis serpentine receptor-like protein, class xa [PF03383.17, score=18.8]} {Human: ENSG00000121853, GHSR, growth hormone secretagogue receptor, [Score=49.3, Expect=7e-06]} {Mouse: ENSMUSG00000051136, Ghsr, growth hormone secretagogue receptor, [Score=48.1, Expect=1e-05]; ENSMUSG00000026343, Gpr39, G protein-coupled receptor 39, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_56204_0_1, dd_Smed_v6_56204_0_1, [Score=65.1, Expect=1e-11]} {RNA1509_34672} {RNA1310_14573} {RNA815_16880}
19. MligTC455_12827 18 0.38 Mlig455_034312

Neo: -

Age: -

 RALGDS 0.962 - - - - - 0.962 Mlig455_034312 {REF} {Length: 2567} {Pfam: RasGEF domain [PF00617.21, score=109.4]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=26.9]} {Human: ENSG00000160271, RALGDS, ral guanine nucleotide dissociation stimulator, [Score=130, Expect=7e-31]; ENSG00000285245, AL162417.1, novel protein, [Score=129, Expect=1e-30]; ENSG00000237441, RGL2, ral guanine nucleotide dissociation stimulator like 2, [Score=127, Expect=4e-30]; ENSG00000228736, RGL2, ral guanine nucleotide dissociation stimulator like 2, [Score=127, Expect=4e-30]; ENSG00000237825, RGL2, ral guanine nucleotide dissociation stimulator like 2, [Score=127, Expect=4e-30]; ENSG00000206282, RGL2, ral guanine nucleotide dissociation stimulator like 2, [Score=127, Expect=4e-30]; ENSG00000224841, RGL2, ral guanine nucleotide dissociation stimulator like 2, [Score=127, Expect=4e-30]} {Mouse: ENSMUSG00000026821, Ralgds, ral guanine nucleotide dissociation stimulator, [Score=132, Expect=2e-31]} {Dmel: FBgn0026376, Rgl, Ral guanine nucleotide dissociation stimulator-like, [Score=144, Expect=2e-35]} {Celegans: WBGene00017891, rgl-1, Ral GDS-Like, [Score=126, Expect=6e-30]} {Smed: dd_Smed_v6_9547_0_1, dd_Smed_v6_9547_0_1, [Score=52.0, Expect=1e-06]} {RNA1310_47565} {RNA815_38581}
20. MligTC455_18924 268 5.58 Mlig455_037407

Neo: -

Age: -

Region-enriched R6: 3.535/0.00019

 RAC1 0.959 - - - - - 0.959 Mlig455_037407 {REF} {Length: 886} {Pfam: Ras family [PF00071.24, score=170.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=33.4]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=243, Expect=6e-82]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=243, Expect=7e-82]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=241, Expect=5e-81]; ENSG00000177105, RHOG, ras homolog family member G, [Score=239, Expect=2e-80]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=243, Expect=4e-82]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=241, Expect=2e-81]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=241, Expect=3e-81]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=239, Expect=2e-80]} {Dmel: FBgn0010333, Rac1, [Score=246, Expect=2e-83]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=254, Expect=1e-86]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=233, Expect=2e-78]} {RNA1310_44039} {RNA815_20612.1}
21. MligTC455_21241 227 4.72 Mlig455_003951, Mlig455_003971, Mlig455_003981

Neo: -

Age: Up-Down-Up

Region-enriched R6: 3.398/0.00277

 FANK1 0.959 - - - - - 0.959

Mlig455_003951 {REF} {Length: 6669} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=39.8]; Ankyrin repeats (3 copies) [PF12796.9, score=37.0]; Ankyrin repeats (many copies) [PF13637.8, score=26.4]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=22.1]; Ankyrin repeat [PF00023.32, score=22.0]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=5e-07]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=52.4, Expect=5e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=48.1, Expect=9e-06]} {RNA1509_26473} {RNA1310_2004} {RNA815_1357.1}

Mlig455_003971 {REF} {Length: 6673} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=39.5]; Ankyrin repeats (3 copies) [PF12796.9, score=37.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.4]; Ankyrin repeats (many copies) [PF13857.8, score=25.5]; Ankyrin repeat [PF00023.32, score=21.4]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=5e-07]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=52.4, Expect=5e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=48.1, Expect=9e-06]} {RNA1509_26473} {RNA1310_2004} {RNA815_1357.1}

Mlig455_003981 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=41.5]; Ankyrin repeats (3 copies) [PF12796.9, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=26.9]; Ankyrin repeat [PF00023.32, score=22.4]; Ankyrin repeats (many copies) [PF13857.8, score=20.6]; Ankyrin repeat [PF13606.8, score=19.7]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=4e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=50.4, Expect=1e-05]} {Dmel: FBgn0264743, CG44001, [Score=47.8, Expect=1e-05]} {RNA1509_42419} {RNA1310_2004} {RNA815_1357.1}
22. MligTC455_19970 173 3.59 Mlig455_034815

Neo: -

Age: -

Region-enriched R6: 4.214/0.00162

 NR1I2 0.957 - - - - - 0.957 Mlig455_034815 {REF} {Length: 2960} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=75.1]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=136, Expect=2e-34]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=129, Expect=9e-33]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=123, Expect=2e-30]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=134, Expect=3e-33]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [RH, Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=144, Expect=1e-37]} {RNA1509_24283} {RNA1310_5453} {RNA815_10529.1}
23. MligTC455_21236 54 1.12 Mlig455_022300

Neo: -

Age: -

 EFNB2 0.957 - - - - 0.957 - Mlig455_022300 {REF} {Length: 2080} {Pfam: Ephrin [PF00812.19, score=54.8]} {Human: ENSG00000125266, EFNB2, ephrin B2, [RH, Score=75.1, Expect=9e-15]} {Mouse: ENSMUSG00000001300, Efnb2, ephrin B2, [RH, Score=75.1, Expect=6e-15]} {Celegans: WBGene00001165, efn-4, Ephrin-4, [Score=49.7, Expect=1e-06]} {RNA1310_17193.1} {RNA815_6680}
24. MligTC455_39269 29 0.6 Mlig455_066512

Neo: -

Age: -

 KCNB2 0.956 - - - - 0.956 - Mlig455_066512 {REF} {Length: 6059} {Pfam: Ion transport protein [PF00520.33, score=157.5]; BTB/POZ domain [PF02214.24, score=82.8]; IRSp53/MIM homology domain [PF08397.13, score=77.0]; Ion channel [PF07885.18, score=44.7]} {Human: ENSG00000182674, KCNB2, potassium voltage-gated channel subfamily B member 2, [Score=514, Expect=2e-160]; ENSG00000158445, KCNB1, potassium voltage-gated channel subfamily B member 1, [Score=508, Expect=4e-159]} {Mouse: ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=513, Expect=1e-160]; ENSMUSG00000050556, Kcnb1, potassium voltage gated channel, Shab-related subfamily, member 1, [Score=506, Expect=2e-158]} {Dmel: FBgn0262593, Shab, Shaker cognate b, [Score=533, Expect=1e-169]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=287, Expect=4e-84]} {Smed: dd_Smed_v6_13710_0_1, dd_Smed_v6_13710_0_1, [Score=529, Expect=2e-167]} {RNA1509_52791} {RNA1310_22952} {RNA815_16287.1}
25. MligTC455_35620 83 1.73 Mlig455_063105

Neo: -

Age: -

 CCDC148 0.955 - - - - 0.955 - Mlig455_063105 {REF} {Length: 3384} {TRANSSPLICED} {Human: ENSG00000153237, CCDC148, coiled-coil domain containing 148, [RH, Score=192, Expect=7e-53]} {Mouse: ENSMUSG00000036641, Ccdc148, coiled-coil domain containing 148, [RH, Score=178, Expect=5e-48]} {Smed: dd_Smed_v6_11931_0_1, dd_Smed_v6_11931_0_1, [RH, Score=209, Expect=1e-59]} {RNA1509_13480} {RNA1310_11755, RNA1509_13480} {RNA1509_13480, RNA815_18886}
26. MligTC455_00043 14 0.29 Mlig455_053584

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_053584 {REF} {Length: 359} {NoTransDecoderORF}
27. MligTC455_27404 126 2.62 Mlig455_055427

Neo: Germline

Age: Up-Down-Down

Region-enriched R5: 2.811/0.00047

 0.954 - - - - - 0.954 Mlig455_055427 {REF} {Length: 5785} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=20.1]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=62.8, Expect=3e-09]} {RNA1509_31175} {RNA1310_11529} {RNA815_1590.1}
28. MligTC455_06947 1605 33.43 Mlig455_016219, Mlig455_054265

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.362

Region-enriched R6: 8.322/0.00000

 0.953 - - - - - 0.953

Mlig455_016219 {REF} {Length: 1967} {Pfam: PPE family [PF00823.21, score=19.2]} {RNA1509_18974, RNA1509_35153, RNA1509_44922} {RNA1310_20486.2, RNA1509_18974, RNA1509_35153, RNA1509_44922} {RNA1509_18974, RNA1509_35153, RNA1509_44922, RNA815_8735.1}

Mlig455_054265 {REF} {Length: 2060} {RNA1509_35153} {RNA1310_20486.2} {RNA815_8735.1}
29. MligTC455_31654 237 4.94 Mlig455_042710

Neo: -

Age: logFC(26M/2M)=-0.423

Region-enriched R6: 7.099/0.00000

 LNPEP 0.953 - - - - - 0.953 Mlig455_042710 {REF} {Length: 5140} {Pfam: Peptidase family M1 domain [PF01433.22, score=202.5]; Peptidase M1 N-terminal domain [PF17900.3, score=125.2]; ERAP1-like C-terminal domain [PF11838.10, score=76.2]} {Human: ENSG00000113441, LNPEP, leucyl and cystinyl aminopeptidase, [Score=332, Expect=1e-99]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=323, Expect=5e-97]; ENSG00000138792, ENPEP, glutamyl aminopeptidase, [Score=323, Expect=7e-97]; ENSG00000072657, TRHDE, thyrotropin releasing hormone degrading enzyme, [Score=320, Expect=4e-95]; ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=320, Expect=1e-95]} {Mouse: ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=337, Expect=1e-101]; ENSMUSG00000050663, Trhde, TRH-degrading enzyme, [Score=323, Expect=2e-96]} {Dmel: FBgn0052473, CG32473, [Score=357, Expect=3e-110]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [Score=291, Expect=2e-85]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=398, Expect=1e-124]} {RNA1509_14706, RNA1509_9126} {RNA1310_6661.2, RNA1509_14706, RNA1509_9126} {RNA1509_14706, RNA1509_9126, RNA815_1900.2}
30. MligTC455_47820 31 0.64 Mlig455_045035

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_045035 {REF} {Length: 1162} {NoTransDecoderORF} {RNA1310_101887} {RNA815_34920}
31. MligTC455_02837 29 0.61 Mlig455_004700

Neo: -

Age: -

Region-enriched R6: 6.687/0.01418

 0.952 - - - - - 0.952 Mlig455_004700 {REF} {Length: 1630} {RNA1509_44223} {RNA1310_194.1} {RNA815_27158}
32. MligTC455_41542 144 2.99 Mlig455_017263

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.389

 MYT1 0.951 - - - - - 0.951 Mlig455_017263 {REF} {Length: 3726} {Pfam: Zinc finger, C2HC type [PF01530.20, score=165.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.3]} {Human: ENSG00000276876, MYT1, myelin transcription factor 1, [RH, Score=133, Expect=5e-31]; ENSG00000196132, MYT1, myelin transcription factor 1, [RH, Score=133, Expect=5e-31]; ENSG00000275018, AL121581.1, novel transcript, [RH, Score=132, Expect=4e-31]; ENSG00000147488, ST18, ST18, C2H2C-type zinc finger, [RH, Score=127, Expect=2e-29]} {Mouse: ENSMUSG00000010505, Myt1, myelin transcription factor 1, [RH, Score=132, Expect=6e-31]; ENSMUSG00000033740, St18, suppression of tumorigenicity 18, [RH, Score=127, Expect=2e-29]} {Dmel: FBgn0263772, CG43689, [RH, Score=100, Expect=5e-21]} {Celegans: WBGene00009939, ztf-11, Zinc finger putative Transcription Factor family, [Score=112, Expect=7e-26]} {Smed: dd_Smed_v6_18107_0_1, dd_Smed_v6_18107_0_1, [RH, Score=144, Expect=1e-37]} {RNA1310_62112} {RNA815_43721.1}
33. MligTC455_12011 1338 27.87 Mlig455_058825

Neo: -

Age: -

Region-specific R6: 5.670

Region-enriched R6: 6.201/0.00000

 PLA2G10 0.95 - - - - - 0.950 Mlig455_058825 {REF} {Length: 704} {TRANSSPLICED} {Pfam: Phospholipase A2 [PF00068.21, score=84.3]; Phospholipase A2 [PF05826.14, score=27.4]; Phospholipase A2-like domain [PF08398.12, score=22.0]} {Human: ENSG00000276870, PLA2G10, phospholipase A2 group X, [RH, Score=65.1, Expect=5e-13]; ENSG00000069764, PLA2G10, phospholipase A2 group X, [RH, Score=65.1, Expect=5e-13]} {Mouse: ENSMUSG00000029522, Pla2g1b, phospholipase A2, group IB, pancreas, [RH, Score=58.9, Expect=6e-11]} {Dmel: FBgn0039655, CG14507, [RH, Score=46.2, Expect=6e-06]} {Celegans: WBGene00007419, C07E3.9, Phospholipase A(2), [Score=55.8, Expect=4e-10]} {Smed: dd_Smed_v6_13334_0_1, dd_Smed_v6_13334_0_1, [RH, Score=72.0, Expect=4e-16]} {RNA1509_18299, RNA1509_29181} {RNA1310_39768.1, RNA1509_18299, RNA1509_29181} {RNA1509_18299, RNA1509_29181, RNA815_24264}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA