Data search


search
Exact
Search

Results for MligTC455_41188

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41188 1930 40.21 Mlig455_049658, Mlig455_049684

Neo: -

Age: Down-Up-Up

Mlig455_049658 {REF} {Length: 636} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14567} {RNA1310_52972.1, RNA1509_14567} {RNA1509_14567, RNA815_27084.1}

Mlig455_049684 {REF} {Length: 281} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14567} {RNA1310_52972.2} {RNA815_27084.1}

Cumulative graph for MligTC455_41188

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.553 5.481 0.40693 1.00000
RegionR2 -0.199 5.481 0.62505 0.96749
RegionR3 -0.277 5.481 0.43985 0.95616
RegionR4 0.105 5.481 0.78239 1.00000
RegionR5 0.95 5.481 0.00224 0.01904
RegionR6 0.38 5.481 0.25732 0.84373
RegionR7 -0.179 5.481 0.63243 1.00000
RegionR8 -0.227 5.481 0.58893 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.875 5.481 0.02444 0.59347
RegenerationR2 -0.102 5.481 0.80531 0.99114
RegenerationR3 -0.025 5.481 0.95368 1.00000
RegenerationR4 -0.287 5.481 0.51160 0.87526
RegenerationR5 -0.673 5.481 0.09814 0.47872
RegenerationR6 -1.148 5.481 0.00915 0.11739
RegenerationBL -0.767 5.481 0.07971 0.32967
RegenerationTP -0.737 5.481 0.11642 0.52212


Genes with expression patterns similar to MligTC455_41188

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41188 1930 40.21 Mlig455_049658, Mlig455_049684

Neo: -

Age: Down-Up-Up

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_049658 {REF} {Length: 636} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14567} {RNA1310_52972.1, RNA1509_14567} {RNA1509_14567, RNA815_27084.1}

Mlig455_049684 {REF} {Length: 281} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14567} {RNA1310_52972.2} {RNA815_27084.1}
2. MligTC455_48567 358 7.45 Mlig455_043150

Neo: -

Age: -

Region-enriched R5: 1.668/0.02982

2.438 0.749 - 0.953 - - 0.736 Mlig455_043150 {REF} {Length: 3448} {TRANSSPLICED} {RNA1509_54015} {RNA1310_37014, RNA1509_54015} {RNA1509_54015, RNA815_7246.1}
3. MligTC455_03563 760 15.83 Mlig455_025786

Neo: Int S/G2/M

Age: -

POLR2B 2.41 0.726 - 0.951 - - 0.733 Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
4. MligTC455_50242 658 13.71 Mlig455_010544, Mlig455_061792, Mlig455_061832

Neo: -

Age: -

Region-enriched R5: 2.437/0.00039

1.843 - - 0.953 - - 0.890

Mlig455_010544 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388, RNA1509_46524} {RNA1310_11073, RNA1509_46524} {RNA1509_46524, RNA815_6049}

Mlig455_061792 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073} {RNA815_6049}

Mlig455_061832 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073, RNA1509_22388} {RNA1509_22388, RNA815_6049}
5. MligTC455_03818 987 20.55 Mlig455_048918

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.019/0.00126

MIF 1.724 - - 0.970 - - 0.754 Mlig455_048918 {REF} {Length: 1471} {TRANSSPLICED} {Pfam: Macrophage migration inhibitory factor (MIF) [PF01187.20, score=113.5]; Tautomerase enzyme [PF01361.23, score=20.7]} {Human: ENSG00000240972, MIF, macrophage migration inhibitory factor, [RH, Score=102, Expect=8e-29]; ENSG00000276701, MIF, macrophage migration inhibitory factor, [RH, Score=102, Expect=8e-29]} {Mouse: ENSMUSG00000033307, Mif, macrophage migration inhibitory factor (glycosylation-inhibiting factor), [RH, Score=104, Expect=7e-30]} {Celegans: WBGene00003235, mif-2, MIF-like protein mif-2, [RH, Score=73.2, Expect=6e-18]} {Smed: dd_Smed_v6_2244_0_1, dd_Smed_v6_2244_0_1, [RH, Score=83.2, Expect=6e-22]} {RNA1509_15828} {RNA1310_42809} {RNA815_16436.2}
6. MligTC455_36338 974 20.29 Mlig455_035754

Neo: Int S/G2/M

Age: -

MDH2 1.723 0.772 - 0.951 - - - Mlig455_035754 {REF} {Length: 2920} {TRANSSPLICED} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=167.6]; lactate/malate dehydrogenase, NAD binding domain [PF00056.25, score=152.4]} {Human: ENSG00000146701, MDH2, malate dehydrogenase 2, [RH, Score=432, Expect=7e-152]} {Mouse: ENSMUSG00000019179, Mdh2, malate dehydrogenase 2, NAD (mitochondrial), [RH, Score=431, Expect=8e-152]} {Dmel: FBgn0262559, Mdh2, Malate dehydrogenase 2, [RH, Score=419, Expect=2e-147]} {Celegans: WBGene00003162, mdh-2, Probable malate dehydrogenase, mitochondrial, [RH, Score=371, Expect=2e-128]} {Smed: dd_Smed_v6_656_0_1, dd_Smed_v6_656_0_1, [RH, Score=452, Expect=3e-160]} {RNA1509_7944} {RNA1310_25804, RNA1509_7944} {RNA1509_7944, RNA815_10079}
7. MligTC455_52534 133 2.77 Mlig455_034618

Neo: Neoblast

Age: -

Region-enriched R5: 2.681/0.00356

1.695 - - 0.956 - 0.739 - Mlig455_034618 {REF} {Length: 3320} {TRANSSPLICED} {Pfam: Nucleoporin protein Ndc1-Nup [PF09531.12, score=54.7]} {RNA1509_16900} {RNA1310_7021} {RNA815_8245.1}
8. MligTC455_17042 125 2.59 Mlig455_015900

Neo: -

Age: -

FKBP15 1.662 - - 0.953 - - 0.709 Mlig455_015900 {REF} {Length: 7194} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=29.9]} {Human: ENSG00000119321, FKBP15, FK506 binding protein 15, [RH, Score=317, Expect=2e-88]} {Mouse: ENSMUSG00000066151, Fkbp15, FK506 binding protein 15, [RH, Score=313, Expect=2e-87]} {Smed: dd_Smed_v6_870_0_1, dd_Smed_v6_870_0_1, [RH, Score=134, Expect=3e-31]} {RNA1509_12956, RNA1509_2558} {RNA1310_995.1, RNA1509_12956, RNA1509_2558} {RNA1509_12956, RNA1509_2558, RNA815_3038.1}
9. MligTC455_13659 277 5.77 Mlig455_060046, Mlig455_063498

Neo: Irradiation

Age: Up-Up-Up, logFC(26M/2M)=0.925

Region-enriched R5: 4.130/0.00000

0.959 - - 0.959 - - -

Mlig455_060046 {REF} {Length: 4212} {RNA1509_57337} {RNA1310_9265, RNA1509_57337} {RNA1509_57337, RNA815_13115}

Mlig455_063498 {REF} {Length: 1365} {NoTransDecoderORF} {RNA1509_57337} {RNA1310_54209} {RNA815_29261}
10. MligTC455_47580 1441 30.01 Mlig455_023584

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.781

Region-specific R5: 2.414

Region-enriched R5: 2.374/0.00000

C19orf12 0.954 - - 0.954 - - - Mlig455_023584 {REF} {Length: 651} {TRANSSPLICED} {Human: ENSG00000131943, C19orf12, chromosome 19 open reading frame 12, [Score=70.1, Expect=2e-15]} {Mouse: ENSMUSG00000054676, 1600014C10Rik, RIKEN cDNA 1600014C10 gene, [Score=80.9, Expect=6e-20]} {Dmel: FBgn0023530, CG3740, [Score=69.3, Expect=1e-15]} {RNA1509_54973} {RNA1310_48313.3} {RNA815_24031}
11. MligTC455_03966 1012 21.07 Mlig455_033186

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.215

Region-enriched R5: 1.259/0.00071

NUTF2 0.953 - - 0.953 - - - Mlig455_033186 {REF} {Length: 1688} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=88.9]; Domain of unknown function (DUF4440) [PF14534.8, score=27.6]} {Human: ENSG00000102898, NUTF2, nuclear transport factor 2, [RH, Score=101, Expect=4e-28]} {Mouse: ENSMUSG00000071497, Nutf2-ps1, nuclear transport factor 2, pseudogene 1, [RH, Score=101, Expect=3e-28]; ENSMUSG00000008450, Nutf2, nuclear transport factor 2, [RH, Score=101, Expect=3e-28]} {Dmel: FBgn0032680, Ntf-2r, Nuclear transport factor-2-related, [RH, Score=102, Expect=7e-29]} {Smed: dd_Smed_v6_1606_0_1, dd_Smed_v6_1606_0_1, [RH, Score=138, Expect=2e-43]} {RNA1509_21207, RNA1509_9866} {RNA1310_23274, RNA1509_21207, RNA1509_9866} {RNA1509_21207, RNA1509_9866, RNA815_28192}
12. MligTC455_48694 1650 34.37 Mlig455_010497, Mlig455_061881

Neo: -

Age: -

Region-enriched R5: 1.515/0.00036

PLEKHF2 0.953 - - 0.953 - - -

Mlig455_010497 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=74.4]; PH domain [PF00169.31, score=20.5]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [Score=183, Expect=3e-57]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [Score=182, Expect=3e-57]} {Dmel: FBgn0025381, rush, rush hour, [Score=175, Expect=1e-53]} {Celegans: WBGene00014019, ZK632.12, [Score=174, Expect=6e-54]} {Smed: dd_Smed_v6_2374_0_1, dd_Smed_v6_2374_0_1, [RH, Score=162, Expect=3e-50]} {RNA1509_3755} {RNA1310_20832.2, RNA1509_3755} {RNA1509_3755, RNA815_8504}

Mlig455_061881 {REF} {Length: 1485} {TRANSSPLICED} {Pfam: FYVE zinc finger [PF01363.23, score=74.4]; PH domain [PF00169.31, score=20.5]} {Human: ENSG00000175895, PLEKHF2, pleckstrin homology and FYVE domain containing 2, [Score=183, Expect=3e-57]} {Mouse: ENSMUSG00000049969, Plekhf2, pleckstrin homology domain containing, family F (with FYVE domain) member 2, [Score=182, Expect=3e-57]} {Dmel: FBgn0025381, rush, rush hour, [Score=175, Expect=1e-53]} {Celegans: WBGene00014019, ZK632.12, [Score=174, Expect=6e-54]} {Smed: dd_Smed_v6_2374_0_1, dd_Smed_v6_2374_0_1, [RH, Score=162, Expect=3e-50]} {RNA1509_3755} {RNA1310_20832.2} {RNA815_8504}
13. MligTC455_51939 398 8.29 Mlig455_021929

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.711/0.02614

TOX4 0.952 - - 0.952 - - - Mlig455_021929 {REF} {Length: 2227} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=31.2]; HMG-box domain [PF09011.12, score=30.8]; Coiled-coil domain-containing protein 124 /Oxs1 [PF06244.14, score=19.9]} {Human: ENSG00000092203, TOX4, TOX high mobility group box family member 4, [Score=53.1, Expect=7e-07]; ENSG00000124191, TOX2, TOX high mobility group box family member 2, [Score=52.8, Expect=9e-07]; ENSG00000103460, TOX3, TOX high mobility group box family member 3, [Score=52.4, Expect=1e-06]; ENSG00000198846, TOX, thymocyte selection associated high mobility group box, [Score=50.8, Expect=4e-06]} {Mouse: ENSMUSG00000043668, Tox3, TOX high mobility group box family member 3, [RH, Score=52.4, Expect=9e-07]} {Dmel: FBgn0035238, CG12104, [RH, Score=70.1, Expect=3e-13]} {Smed: dd_Smed_v6_22626_0_1, dd_Smed_v6_22626_0_1, [Score=46.2, Expect=5e-06]} {RNA1509_13216, RNA1509_21366, RNA1509_50240} {RNA1310_11409.1, RNA1509_21366, RNA1509_50240} {RNA1509_21366, RNA1509_50240, RNA815_3695.1}
14. MligTC455_21512 744 15.5 Mlig455_048331

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.079/0.00783

0.951 - - 0.951 - - - Mlig455_048331 {REF} {Length: 1839} {RNA1509_26493, RNA1509_43144} {RNA1310_9878, RNA1509_26493, RNA1509_43144} {RNA1509_26493, RNA1509_43144, RNA815_24669}
15. MligTC455_20987 1769 36.85 Mlig455_028383, Mlig455_035961

Neo: Irradiation

Age: -

Region-specific R5: 2.292

Region-enriched R5: 2.053/0.00000

0.95 - - 0.950 - - -

Mlig455_028383 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.4]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}

Mlig455_035961 {REF} {Length: 1098} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.1]} {RNA1509_12313} {RNA1310_31319} {RNA815_14142}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA