Data search
Results for MligTC455_41244
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41244 | 813 | 16.94 | Mlig455_060608, Mlig455_060649 | Neo: - Age: logFC(26M/2M)=0.521 |
Mlig455_060608 {REF} {Length: 1075} {TRANSSPLICED} {RNA1509_34912} {RNA1310_68216, RNA1509_34912} {RNA1509_34912, RNA815_35809} Mlig455_060649 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_34912, RNA1509_44600} {RNA1310_68216, RNA1509_44600} {RNA1509_44600, RNA815_27139} |
Cumulative graph for MligTC455_41244
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.55 | 4.485 | 0.00831 | 0.27033 | |
| RegionR2 | 1.507 | 4.485 | 0.01227 | 0.11441 | |
| RegionR3 | 0.405 | 4.485 | 0.39802 | 0.92750 | |
| RegionR4 | -0.581 | 4.485 | 0.30195 | 0.61500 | |
| RegionR5 | 0.803 | 4.485 | 0.05685 | 0.20525 | |
| RegionR6 | 0.875 | 4.485 | 0.06547 | 0.47939 | |
| RegionR7 | 0.102 | 4.485 | 0.85078 | 1.00000 | |
| RegionR8 | 0.439 | 4.485 | 0.49146 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.241 | 4.485 | 0.60256 | 1.00000 | |
| RegenerationR2 | -0.331 | 4.485 | 0.52537 | 0.88212 | |
| RegenerationR3 | 0.876 | 4.485 | 0.12497 | 0.54588 | |
| RegenerationR4 | 0.382 | 4.485 | 0.51062 | 0.87463 | |
| RegenerationR5 | 0.366 | 4.485 | 0.48220 | 0.84737 | |
| RegenerationR6 | 0.058 | 4.485 | 0.91223 | 1.00000 | |
| RegenerationBL | -0.382 | 4.485 | 0.56552 | 0.92004 | |
| RegenerationTP | 0.63 | 4.485 | 0.33029 | 0.77497 |
Genes with expression patterns similar to MligTC455_41244
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41244 | 813 | 16.94 | Mlig455_060608, Mlig455_060649 | Neo: - Age: logFC(26M/2M)=0.521 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_060608 {REF} {Length: 1075} {TRANSSPLICED} {RNA1509_34912} {RNA1310_68216, RNA1509_34912} {RNA1509_34912, RNA815_35809} Mlig455_060649 {REF} {Length: 1010} {TRANSSPLICED} {RNA1509_34912, RNA1509_44600} {RNA1310_68216, RNA1509_44600} {RNA1509_44600, RNA815_27139} |
|
| 2. | MligTC455_45348 | 449 | 9.36 | Mlig455_018197 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.344 Region-enriched R4: 1.570/0.01352 |
1.759 | - | 0.802 | - | - | - | 0.957 | Mlig455_018197 {REF} {Length: 557} {TRANSSPLICED} {RNA1509_8488} {RNA1310_53570} {RNA815_35020} | |
| 3. | MligTC455_14911 | 498 | 10.38 | Mlig455_024924 | Neo: - Age: - |
1.718 | - | - | - | - | 0.745 | 0.973 | Mlig455_024924 {REF} {Length: 1825} {TRANSSPLICED} {RNA1509_24815, RNA1509_41866} {RNA1310_11114, RNA1509_24815, RNA1509_41866} {RNA1509_24815, RNA1509_41866, RNA815_15710} | |
| 4. | MligTC455_47855 | 633 | 13.19 | Mlig455_000518 | Neo: - Age: - |
0.981 | - | - | - | - | - | 0.981 | Mlig455_000518 {REF} {Length: 2702} {TRANSSPLICED} {Pfam: Peroxin-3 [PF04882.14, score=51.0]} {Dmel: FBgn0036484, Pex3, Peroxin 3, [Score=65.1, Expect=3e-11]} {RNA1509_31527} {RNA1310_21890} {RNA815_20801} | |
| 5. | MligTC455_41428 | 1100 | 22.92 | Mlig455_028046 | Neo: - Age: - Region-enriched R5: 1.695/0.00005 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_028046 {REF} {Length: 1663} {Pfam: Galactoside-binding lectin [PF00337.24, score=77.5]} {Mouse: ENSMUSG00000050335, Lgals3, lectin, galactose binding, soluble 3, [RH, Score=51.6, Expect=6e-07]; ENSMUSG00000053522, Lgals7, lectin, galactose binding, soluble 7, [RH, Score=49.3, Expect=6e-07]} {Dmel: FBgn0031214, CG11374, [RH, Score=70.1, Expect=7e-13]} {Celegans: WBGene00002265, lec-2, Galectin, [RH, Score=68.2, Expect=9e-13]} {RNA1509_56269} {RNA1310_22513} {RNA815_11359} | |
| 6. | MligTC455_35099 | 2100 | 43.74 | Mlig455_018503 | Neo: - Age: Down-Down-Up |
FKBP2 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_018503 {REF} {Length: 1379} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=117.7]} {Human: ENSG00000173486, FKBP2, FK506 binding protein 2, [RH, Score=165, Expect=1e-52]} {Mouse: ENSMUSG00000056629, Fkbp2, FK506 binding protein 2, [RH, Score=166, Expect=3e-53]} {Dmel: FBgn0010470, Fkbp14, FK506-binding protein 14, [RH, Score=137, Expect=4e-41]} {Celegans: WBGene00001426, fkb-1, Peptidylprolyl isomerase, [RH, Score=163, Expect=2e-52]} {Smed: dd_Smed_v6_1536_0_1, dd_Smed_v6_1536_0_1, [RH, Score=173, Expect=2e-56]} {RNA1509_27564} {RNA1310_35669.1, RNA1509_27564} {RNA1509_27564, RNA815_16576} |
| 7. | MligTC455_47781 | 1192 | 24.84 | Mlig455_006493, Mlig455_006614 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_006493 {REF} {Length: 1635} {RNA1509_13310} {RNA1310_19450, RNA1509_13310} {RNA1509_13310, RNA815_7765} Mlig455_006614 {REF} {Length: 1632} {TRANSSPLICED} {RNA1509_13310} {RNA1310_19450} {RNA815_7765} |
|
| 8. | MligTC455_11020 | 283 | 5.89 | Mlig455_010350 | Neo: - Age: Up-Down-Up |
SLC12A8 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_010350 {REF} {Length: 3686} {Pfam: Amino acid permease [PF00324.23, score=133.7]; CobD/Cbib protein [PF03186.15, score=19.3]} {Human: ENSG00000221955, SLC12A8, solute carrier family 12 member 8, [RH, Score=333, Expect=9e-104]} {Mouse: ENSMUSG00000035506, Slc12a8, solute carrier family 12 (potassium/chloride transporters), member 8, [RH, Score=317, Expect=5e-98]} {Dmel: FBgn0024365, CG12773, [RH, Score=443, Expect=2e-146]} {Celegans: WBGene00017350, F10E7.9, [RH, Score=338, Expect=3e-107]} {Smed: dd_Smed_v6_8108_0_1, dd_Smed_v6_8108_0_1, [Score=431, Expect=2e-142]} {RNA1509_13545} {RNA1310_9630.1, RNA1509_13545} {RNA1509_13545, RNA815_6334} |
| 9. | MligTC455_43021 | 837 | 17.43 | Mlig455_006334 | Neo: - Age: - Region-enriched R4: 1.971/0.00562 |
RAB35 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_006334 {REF} {Length: 2734} {Pfam: Ras family [PF00071.24, score=200.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.5]; ADP-ribosylation factor family [PF00025.23, score=55.4]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; RsgA GTPase [PF03193.18, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.3]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Dmel: FBgn0031090, Rab35, [RH, Score=236, Expect=3e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=232, Expect=9e-78]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=209, Expect=6e-69]} {RNA1509_19785, RNA1509_46148} {RNA1310_25273, RNA1509_46148} {RNA1509_46148, RNA815_11011.1} |
| 10. | MligTC455_39827 | 59 | 1.23 | Mlig455_069154 | Neo: - Age: Down-Down-Up |
SUFU | 0.961 | - | - | - | 0.961 | - | - | Mlig455_069154 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: Suppressor of fused protein (SUFU) [PF05076.15, score=115.3]; Suppressor of Fused Gli/Ci N terminal binding domain [PF12470.10, score=83.7]} {Human: ENSG00000107882, SUFU, SUFU negative regulator of hedgehog signaling, [RH, Score=229, Expect=4e-70]} {Mouse: ENSMUSG00000025231, Sufu, SUFU negative regulator of hedgehog signaling, [RH, Score=209, Expect=2e-62]} {Dmel: FBgn0005355, Su(fu), Suppressor of fused, [RH, Score=187, Expect=1e-54]} {Smed: dd_Smed_v6_10354_0_1, dd_Smed_v6_10354_0_1, [RH, Score=197, Expect=1e-58]} {RNA1509_14191} {RNA1310_26619} {RNA815_22563} |
| 11. | MligTC455_52337 | 291 | 6.07 | Mlig455_008793 | Neo: - Age: - |
C2orf76 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_008793 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2340) [PF10209.11, score=127.1]} {Human: ENSG00000186132, C2orf76, chromosome 2 open reading frame 76, [RH, Score=97.1, Expect=3e-26]} {Mouse: ENSMUSG00000026388, 3110009E18Rik, RIKEN cDNA 3110009E18 gene, [RH, Score=92.0, Expect=2e-24]} {RNA1509_25259} {RNA1310_9901.1} {RNA815_28452} |
| 12. | MligTC455_35100 | 2141 | 44.6 | Mlig455_065163 | Neo: Int S/G2/M Age: - |
FKBP2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_065163 {REF} {Length: 1620} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=120.9]} {Human: ENSG00000173486, FKBP2, FK506 binding protein 2, [RH, Score=164, Expect=2e-52]} {Mouse: ENSMUSG00000056629, Fkbp2, FK506 binding protein 2, [RH, Score=166, Expect=3e-53]} {Dmel: FBgn0010470, Fkbp14, FK506-binding protein 14, [RH, Score=137, Expect=3e-41]} {Celegans: WBGene00001426, fkb-1, Peptidylprolyl isomerase, [RH, Score=162, Expect=3e-52]} {Smed: dd_Smed_v6_1536_0_1, dd_Smed_v6_1536_0_1, [RH, Score=176, Expect=9e-58]} {RNA1509_46806, RNA1509_5393} {RNA1310_35669.1, RNA1509_46806, RNA1509_5393} {RNA1509_46806, RNA1509_5393, RNA815_16576} |
| 13. | MligTC455_43022 | 1772 | 36.91 | Mlig455_006338, Mlig455_061233 | Neo: - Age: - Region-enriched R5: 1.963/0.00031 |
RAB35 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_006338 {REF} {Length: 3641} {Pfam: Ras family [PF00071.24, score=201.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=55.1]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; RsgA GTPase [PF03193.18, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.3]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Dmel: FBgn0031090, Rab35, [RH, Score=236, Expect=3e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=233, Expect=6e-78]} {Smed: dd_Smed_v6_854_0_8, dd_Smed_v6_854_0_8, [Score=211, Expect=1e-69]} {RNA1509_17024, RNA1509_19785} {RNA1310_25273, RNA1509_17024} {RNA1509_17024, RNA815_11011.1} Mlig455_061233 {REF} {Length: 3852} {Pfam: Ras family [PF00071.24, score=187.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=106.1]; ADP-ribosylation factor family [PF00025.23, score=47.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.9]; 50S ribosome-binding GTPase [PF01926.25, score=20.1]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=222, Expect=1e-73]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [Score=222, Expect=7e-74]} {Dmel: FBgn0031090, Rab35, [RH, Score=210, Expect=2e-69]} {Celegans: WBGene00004284, rab-35, RAB family, [Score=203, Expect=1e-66]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=188, Expect=6e-61]} {RNA1509_19785} {RNA1310_25273} {RNA815_11011.1} |
| 14. | MligTC455_53615 | 230 | 4.8 | Mlig455_024582 | Neo: - Age: - |
SLC25A42 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_024582 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=229.7]; Mitochondrial SLC25 homolog [PF18405.3, score=18.0]} {Human: ENSG00000181035, SLC25A42, solute carrier family 25 member 42, [RH, Score=286, Expect=8e-95]} {Mouse: ENSMUSG00000002346, Slc25a42, solute carrier family 25, member 42, [RH, Score=287, Expect=1e-95]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [RH, Score=284, Expect=9e-94]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [RH, Score=270, Expect=2e-89]} {Smed: dd_Smed_v6_11616_0_1, dd_Smed_v6_11616_0_1, [RH, Score=284, Expect=9e-95]} {RNA1509_14364, RNA1509_32699, RNA1509_47354, RNA1509_51821} {RNA1310_16060, RNA1509_14364, RNA1509_32699, RNA1509_47354, RNA1509_51821} {RNA1509_14364, RNA1509_32699, RNA1509_47354, RNA1509_51821, RNA815_8391} |
Berezikov Lab - 2020-2021 © ERIBA