Data search


search
Exact
Search

Results for MligTC455_41256

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41256 1276 26.59 Mlig455_024227

Neo: -

Age: logFC(26M/2M)=0.191

SLC25A20 Mlig455_024227 {REF} {Length: 2430} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=240.6]} {Human: ENSG00000178537, SLC25A20, solute carrier family 25 member 20, [RH, Score=385, Expect=1e-134]} {Mouse: ENSMUSG00000032602, Slc25a20, solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20, [RH, Score=385, Expect=8e-135]} {Dmel: FBgn0019830, colt, congested-like trachea, [RH, Score=359, Expect=2e-124]} {Celegans: WBGene00000996, dif-1, [RH, Score=336, Expect=1e-115]} {Smed: dd_Smed_v6_1823_0_1, dd_Smed_v6_1823_0_1, [RH, Score=231, Expect=1e-76]} {RNA1509_23654, RNA1509_38096, RNA1509_59495} {RNA1310_13735.2, RNA1509_23654, RNA1509_38096, RNA1509_59495} {RNA1509_23654, RNA1509_38096, RNA1509_59495, RNA815_12369}

Cumulative graph for MligTC455_41256

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.18 4.916 0.79816 1.00000
RegionR2 0.177 4.916 0.66927 0.99752
RegionR3 0.636 4.916 0.04173 0.35642
RegionR4 -0.263 4.916 0.47084 0.79894
RegionR5 0.06 4.916 0.83953 1.00000
RegionR6 0.181 4.916 0.58314 1.00000
RegionR7 -0.542 4.916 0.19561 0.80193
RegionR8 -0.068 4.916 0.88782 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.344 4.916 0.34947 1.00000
RegenerationR2 -0.085 4.916 0.82999 0.99786
RegenerationR3 0.115 4.916 0.77379 0.97294
RegenerationR4 0.442 4.916 0.26239 0.71011
RegenerationR5 0.488 4.916 0.19549 0.62707
RegenerationR6 0.531 4.916 0.18704 0.52370
RegenerationBL -0.649 4.916 0.23950 0.59318
RegenerationTP 0.428 4.916 0.39469 0.82555


Genes with expression patterns similar to MligTC455_41256

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41256 1276 26.59 Mlig455_024227

Neo: -

Age: logFC(26M/2M)=0.191

SLC25A20 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024227 {REF} {Length: 2430} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=240.6]} {Human: ENSG00000178537, SLC25A20, solute carrier family 25 member 20, [RH, Score=385, Expect=1e-134]} {Mouse: ENSMUSG00000032602, Slc25a20, solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20, [RH, Score=385, Expect=8e-135]} {Dmel: FBgn0019830, colt, congested-like trachea, [RH, Score=359, Expect=2e-124]} {Celegans: WBGene00000996, dif-1, [RH, Score=336, Expect=1e-115]} {Smed: dd_Smed_v6_1823_0_1, dd_Smed_v6_1823_0_1, [RH, Score=231, Expect=1e-76]} {RNA1509_23654, RNA1509_38096, RNA1509_59495} {RNA1310_13735.2, RNA1509_23654, RNA1509_38096, RNA1509_59495} {RNA1509_23654, RNA1509_38096, RNA1509_59495, RNA815_12369}
2. MligTC455_44799 1254 26.12 Mlig455_063760

Neo: -

Age: -

MEST 1.826 - - - 0.955 - 0.871 Mlig455_063760 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=48.4]; alpha/beta hydrolase fold [PF00561.22, score=44.8]; Serine aminopeptidase, S33 [PF12146.10, score=32.6]} {Human: ENSG00000106484, MEST, mesoderm specific transcript, [RH, Score=113, Expect=4e-28]} {Mouse: ENSMUSG00000051855, Mest, mesoderm specific transcript, [RH, Score=114, Expect=2e-28]} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1310_16921, RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916} {RNA1509_17233, RNA1509_29667, RNA1509_51421, RNA1509_59650, RNA1509_9916, RNA815_7250.1}
3. MligTC455_50759 478 9.97 Mlig455_057899

Neo: -

Age: -

1.72 - - 0.757 0.963 - - Mlig455_057899 {REF} {Length: 535} {RNA1509_29040} {RNA1310_42952} {RNA815_48443}
4. MligTC455_46211 479 9.98 Mlig455_014662

Neo: -

Age: -

Region-enriched R4: 2.073/0.02650
Region-enriched R3: 2.057/0.02308

FAIM 0.964 - - - 0.964 - - Mlig455_014662 {REF} {Length: 1340} {TRANSSPLICED} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=184.7]} {Human: ENSG00000158234, FAIM, Fas apoptotic inhibitory molecule, [Score=156, Expect=7e-48]} {Mouse: ENSMUSG00000032463, Faim, Fas apoptotic inhibitory molecule, [Score=155, Expect=2e-47]} {Dmel: FBgn0033985, CG10257, [Score=104, Expect=1e-27]} {Celegans: WBGene00016633, C44B11.1, [Score=143, Expect=5e-43]} {Smed: dd_Smed_v6_9854_0_1, dd_Smed_v6_9854_0_1, [Score=127, Expect=1e-36]} {RNA1509_37986} {RNA1310_24319} {RNA815_17408.1}
5. MligTC455_48797 154 3.21 Mlig455_054068

Neo: -

Age: -

0.961 - - - 0.961 - - Mlig455_054068 {REF} {Length: 3150} {Dmel: FBgn0051195, CG31195, [Score=164, Expect=5e-43]} {Smed: dd_Smed_v6_2407_0_1, dd_Smed_v6_2407_0_1, [Score=264, Expect=4e-78]} {RNA1509_26475} {RNA1310_2842} {RNA815_1220.1}
6. MligTC455_43555 488 10.16 Mlig455_019847

Neo: -

Age: logFC(26M/2M)=0.284

Region-enriched R5: 1.886/0.00001
Region-enriched R4: 1.842/0.00087

CHPT1 0.959 - - - 0.959 - - Mlig455_019847 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: CDP-alcohol phosphatidyltransferase [PF01066.23, score=64.6]} {Human: ENSG00000111666, CHPT1, choline phosphotransferase 1, [RH, Score=291, Expect=4e-95]; ENSG00000134255, CEPT1, choline/ethanolamine phosphotransferase 1, [RH, Score=285, Expect=1e-92]} {Mouse: ENSMUSG00000040774, Cept1, choline/ethanolaminephosphotransferase 1, [RH, Score=285, Expect=1e-92]; ENSMUSG00000060002, Chpt1, choline phosphotransferase 1, [RH, Score=281, Expect=2e-91]} {Dmel: FBgn0033844, bbc, bb in a boxcar, [RH, Score=276, Expect=4e-89]} {Celegans: WBGene00013024, cept-2, Choline/EthanolaminePhosphoTransferase, [RH, Score=268, Expect=3e-86]} {Smed: dd_Smed_v6_7722_0_1, dd_Smed_v6_7722_0_1, [RH, Score=315, Expect=9e-105]} {RNA1509_16795, RNA1509_26545, RNA1509_45062, RNA1509_9172} {RNA1310_15705, RNA1509_16795, RNA1509_26545, RNA1509_45062} {RNA1509_16795, RNA1509_26545, RNA1509_45062, RNA815_5861}
7. MligTC455_48310 634 13.21 Mlig455_016365

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.863/0.00506

KDELR2 0.951 - - - 0.951 - - Mlig455_016365 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: ER lumen protein retaining receptor [PF00810.20, score=184.8]} {Human: ENSG00000136240, KDELR2, KDEL endoplasmic reticulum protein retention receptor 2, [Score=301, Expect=2e-104]} {Mouse: ENSMUSG00000079111, Kdelr2, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2, [Score=303, Expect=1e-105]} {Dmel: FBgn0267330, KdelR, KDEL receptor, [Score=305, Expect=2e-106]} {Celegans: WBGene00001331, erd-2, ER lumen protein-retaining receptor, [Score=278, Expect=5e-96]} {Smed: dd_Smed_v6_1592_0_1, dd_Smed_v6_1592_0_1, [Score=315, Expect=1e-110]} {RNA1509_9853} {RNA1310_24680.1, RNA1509_9853} {RNA1509_9853, RNA815_11582}
8. MligTC455_48966 1196 24.92 Mlig455_011970

Neo: -

Age: logFC(26M/2M)=0.730

Region-enriched R4: 2.185/0.00002
Region-enriched R5: 1.169/0.00499

0.95 - - - 0.950 - - Mlig455_011970 {REF} {Length: 667} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.6]} {RNA1509_11772} {RNA1310_19739.1} {RNA815_20380}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA