TomoSeq data search

Data search

Results for MligTC455_41274

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41274	594	12.38	Mlig455_038971	Neo: - Age: logFC(26M/2M)=0.421 Region-enriched R5: 1.221/0.04294	SPSB1	Mlig455_038971 {REF} {Length: 3730} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=57.5]; SOCS box [PF07525.18, score=32.1]} {Human: ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=328, Expect=4e-111]; ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=318, Expect=3e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=324, Expect=7e-110]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=319, Expect=5e-108]} {Dmel: FBgn0026238, gus, gustavus, [RH, Score=316, Expect=7e-107]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=268, Expect=4e-86]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [RH, Score=232, Expect=1e-73]} {RNA1509_35289, RNA1509_35426, RNA1509_7590} {RNA1310_13209.1, RNA1509_35289, RNA1509_35426} {RNA1509_35289, RNA1509_35426, RNA815_1061.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41274

594

12.38

Mlig455_038971

Neo: -

Age: logFC(26M/2M)=0.421

Region-enriched R5: 1.221/0.04294

SPSB1

Mlig455_038971 {REF} {Length: 3730} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=57.5]; SOCS box [PF07525.18, score=32.1]} {Human: ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=328, Expect=4e-111]; ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=318, Expect=3e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=324, Expect=7e-110]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=319, Expect=5e-108]} {Dmel: FBgn0026238, gus, gustavus, [RH, Score=316, Expect=7e-107]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=268, Expect=4e-86]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [RH, Score=232, Expect=1e-73]} {RNA1509_35289, RNA1509_35426, RNA1509_7590} {RNA1310_13209.1, RNA1509_35289, RNA1509_35426} {RNA1509_35289, RNA1509_35426, RNA815_1061.1}

Cumulative graph for MligTC455_41274

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.765	3.904	0.22019	0.86378
RegionR2	0.654	3.904	0.29232	0.68072
RegionR3	0.318	3.904	0.55491	1.00000
RegionR4	-0.119	3.904	0.84206	1.00000
RegionR5	1.221	3.904	0.00665	0.04294
RegionR6	0.575	3.904	0.26661	0.85472
RegionR7	-0.547	3.904	0.43666	1.00000
RegionR8	-0.337	3.904	0.66894	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.712	3.904	0.27671	0.97801
RegenerationR2	0.679	3.904	0.17834	0.62019
RegenerationR3	1.208	3.904	0.03083	0.31413
RegenerationR4	1.044	3.904	0.07880	0.44544
RegenerationR5	0.398	3.904	0.43772	0.82297
RegenerationR6	0.18	3.904	0.75422	0.95426
RegenerationBL	1.378	3.904	0.01615	0.13453
RegenerationTP	1.048	3.904	0.13077	0.54412

Genes with expression patterns similar to MligTC455_41274

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41274	594	12.38	Mlig455_038971	Neo: - Age: logFC(26M/2M)=0.421 Region-enriched R5: 1.221/0.04294	SPSB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038971 {REF} {Length: 3730} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=57.5]; SOCS box [PF07525.18, score=32.1]} {Human: ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=328, Expect=4e-111]; ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=318, Expect=3e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [RH, Score=324, Expect=7e-110]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [RH, Score=319, Expect=5e-108]} {Dmel: FBgn0026238, gus, gustavus, [RH, Score=316, Expect=7e-107]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=268, Expect=4e-86]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [RH, Score=232, Expect=1e-73]} {RNA1509_35289, RNA1509_35426, RNA1509_7590} {RNA1310_13209.1, RNA1509_35289, RNA1509_35426} {RNA1509_35289, RNA1509_35426, RNA815_1061.1}
2.	MligTC455_49244	649	13.52	Mlig455_033302	Neo: - Age: -	PNN	0.951	-	-	-	-	0.951	-	Mlig455_033302 {REF} {Length: 1963} {Pfam: pinin/SDK/memA/ protein conserved region [PF04696.15, score=72.9]} {Human: ENSG00000100941, PNN, pinin, desmosome associated protein, [RH, Score=65.1, Expect=6e-11]} {Mouse: ENSMUSG00000020994, Pnn, pinin, [RH, Score=65.5, Expect=3e-11]} {Dmel: FBgn0037737, Pnn, Pinin, [RH, Score=68.2, Expect=1e-12]} {RNA1509_10723, RNA1509_39412, RNA1509_55218} {RNA1310_18913, RNA1509_10723, RNA1509_39412, RNA1509_55218} {RNA1509_10723, RNA1509_39412, RNA1509_55218, RNA815_16023}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41274

594

12.38

Mlig455_038971

Neo: -

Age: logFC(26M/2M)=0.421

Region-enriched R5: 1.221/0.04294

SPSB1

1.000

MligTC455_49244

649

13.52

Mlig455_033302

Neo: -

Age: -

PNN

0.951

Mlig455_033302 {REF} {Length: 1963} {Pfam: pinin/SDK/memA/ protein conserved region [PF04696.15, score=72.9]} {Human: ENSG00000100941, PNN, pinin, desmosome associated protein, [RH, Score=65.1, Expect=6e-11]} {Mouse: ENSMUSG00000020994, Pnn, pinin, [RH, Score=65.5, Expect=3e-11]} {Dmel: FBgn0037737, Pnn, Pinin, [RH, Score=68.2, Expect=1e-12]} {RNA1509_10723, RNA1509_39412, RNA1509_55218} {RNA1310_18913, RNA1509_10723, RNA1509_39412, RNA1509_55218} {RNA1509_10723, RNA1509_39412, RNA1509_55218, RNA815_16023}