TomoSeq data search

Data search

Results for MligTC455_41276

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41276

8

0.18

Mlig455_032579

Neo: -

Age: -

Mlig455_032579 {REF} {Length: 4288} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=162.2]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=57.8, Expect=3e-08]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=67.8, Expect=1e-11]} {RNA1509_50860} {RNA1310_22749} {RNA815_18495}

Cumulative graph for MligTC455_41276

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_41276

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41276	8	0.18	Mlig455_032579	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_032579 {REF} {Length: 4288} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=162.2]} {Celegans: WBGene00022815, asic-1, Degenerin-like protein asic-1, [Score=57.8, Expect=3e-08]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=67.8, Expect=1e-11]} {RNA1509_50860} {RNA1310_22749} {RNA815_18495}
2.	MligTC455_29120	76	1.58	Mlig455_006747	Neo: - Age: Down-Up-Down	ARL16	0.981	-	-	-	-	0.981	-	Mlig455_006747 {REF} {Length: 1571} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.8]; G-protein alpha subunit [PF00503.22, score=34.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=31.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=28.1]; Ras family [PF00071.24, score=27.8]; 50S ribosome-binding GTPase [PF01926.25, score=24.1]; RsgA GTPase [PF03193.18, score=23.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.7]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=18.8]} {Human: ENSG00000214087, ARL16, ADP ribosylation factor like GTPase 16, [RH, Score=119, Expect=5e-34]} {Mouse: ENSMUSG00000057594, Arl16, ADP-ribosylation factor-like 16, [RH, Score=117, Expect=2e-33]} {Dmel: FBgn0031254, CG13692, [RH, Score=101, Expect=4e-27]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=66.2, Expect=6e-14]} {Smed: dd_Smed_v6_5801_0_1, dd_Smed_v6_5801_0_1, [Score=115, Expect=4e-33]} {RNA1509_21320} {RNA1310_41928} {RNA815_20468}
3.	MligTC455_01928	4	0.08	Mlig455_041104	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_041104 {REF} {Length: 820} {Pfam: Protein of unknown function (DUF3894) [PF13033.8, score=23.2]}
4.	MligTC455_10104	12	0.25	Mlig455_001753	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_001753 {REF} {Length: 477} {NoTransDecoderORF} {RNA1310_58661} {RNA815_42046}
5.	MligTC455_15109	5	0.1	Mlig455_017072, Mlig455_017073	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_017072 {REF} {Length: 202} {NoTransDecoderORF} Mlig455_017073 {REF} {Length: 181} {NoTransDecoderORF}
6.	MligTC455_42362	36	0.74	Mlig455_023214	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_023214 {REF} {Length: 442} {NoTransDecoderORF} {RNA1509_14659} {RNA1310_8408.1} {RNA815_14343.7}
7.	MligTC455_01900	12	0.25	Mlig455_048119	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_048119 {REF} {Length: 580} {NoTransDecoderORF} {RNA1310_83385}
8.	MligTC455_28879	85	1.77	Mlig455_006586	Neo: - Age: -	ARL16	0.962	-	-	-	-	0.962	-	Mlig455_006586 {REF} {Length: 1743} {Pfam: ADP-ribosylation factor family [PF00025.23, score=71.0]; G-protein alpha subunit [PF00503.22, score=33.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=31.6]; Signal recognition particle receptor beta subunit [PF09439.12, score=27.9]; Ras family [PF00071.24, score=27.1]; RsgA GTPase [PF03193.18, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=19.0]} {Human: ENSG00000214087, ARL16, ADP ribosylation factor like GTPase 16, [RH, Score=123, Expect=8e-36]} {Mouse: ENSMUSG00000057594, Arl16, ADP-ribosylation factor-like 16, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0031254, CG13692, [RH, Score=102, Expect=1e-27]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=65.1, Expect=1e-13]} {Smed: dd_Smed_v6_5801_0_1, dd_Smed_v6_5801_0_1, [RH, Score=122, Expect=1e-35]} {RNA1509_21320} {RNA1310_48678} {RNA815_20468}
9.	MligTC455_19815	81	1.68	Mlig455_043273, Mlig455_043299	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_043273 {REF} {Length: 575} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1} Mlig455_043299 {REF} {Length: 581} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1}
10.	MligTC455_15108	4	0.09	Mlig455_064079	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_064079 {REF} {Length: 619} {RNA1310_19334.2} {RNA815_27448}
11.	MligTC455_22559	3	0.06	Mlig455_013158, Mlig455_032624	Neo: - Age: -	PIF1	0.957	-	-	-	-	0.957	-	Mlig455_013158 {REF} {Length: 1645} {Pfam: PIF1-like helicase [PF05970.16, score=301.0]; AAA domain [PF13604.8, score=52.1]; OB-fold nucleic acid binding domain [PF01336.27, score=24.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=92.8, Expect=4e-19]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=96.3, Expect=1e-20]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=97.4, Expect=5e-21]} {Celegans: WBGene00021577, Y46B2A.2, [Score=231, Expect=2e-65]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=86.7, Expect=9e-18]} {RNA1509_33821} {RNA1310_22845} {RNA815_21067} Mlig455_032624 {REF} {Length: 5438} {Pfam: PIF1-like helicase [PF05970.16, score=182.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=181.1]; Replication protein A OB domain [PF16900.7, score=43.1]; OB-fold nucleic acid binding domain [PF01336.27, score=39.7]; Telomeric single stranded DNA binding POT1/CDC13 [PF02765.19, score=19.3]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=65.9, Expect=5e-10]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=70.1, Expect=2e-11]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=60.1, Expect=1e-08]} {Celegans: WBGene00019136, F59H6.5, [Score=451, Expect=1e-132]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=84.3, Expect=4e-19]} {RNA1509_33821} {RNA1310_27045.1} {RNA815_21067}
12.	MligTC455_01182	8	0.17	Mlig455_019244	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_019244 {REF} {Length: 349} {NoTransDecoderORF} {RNA1310_96403}
13.	MligTC455_03406	13	0.28	Mlig455_043883	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_043883 {REF} {Length: 725} {RNA1310_32915}
14.	MligTC455_04151	10	0.21	Mlig455_045297	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_045297 {REF} {Length: 1865} {RNA1310_83510}
15.	MligTC455_11055	13	0.27	Mlig455_021220	Neo: - Age: -	ZFP36L1	0.954	-	-	-	-	0.954	-	Mlig455_021220 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=58.8]; Zinc finger domain [PF18345.3, score=35.7]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.0]; CCCH-type zinc finger [PF18044.3, score=28.1]} {Human: ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=67.8, Expect=2e-14]; ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=66.2, Expect=9e-14]} {Mouse: ENSMUSG00000059334, Zfp36l3, zinc finger protein 36, C3H type-like 3, [Score=69.7, Expect=4e-15]; ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=68.6, Expect=7e-15]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=69.3, Expect=4e-15]} {Celegans: WBGene00007961, C35D6.4, [RH, Score=66.6, Expect=6e-15]} {RNA1310_91211} {RNA815_52611}

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