TomoSeq data search

Data search

Results for MligTC455_41278

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41278	1129	23.53	Mlig455_017268	Neo: - Age: -	RDH14	Mlig455_017268 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=111.5]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=79.7]; KR domain [PF08659.12, score=28.4]; NAD dependent epimerase/dehydratase family [PF01370.23, score=18.5]} {Human: ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=131, Expect=3e-35]; ENSG00000186153, WWOX, WW domain containing oxidoreductase, [Score=128, Expect=2e-33]; ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=127, Expect=1e-33]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=128, Expect=2e-34]; ENSMUSG00000004637, Wwox, WW domain-containing oxidoreductase, [Score=123, Expect=8e-32]} {Dmel: FBgn0038610, CG7675, [RH, Score=140, Expect=2e-39]} {Celegans: WBGene00000985, dhs-22, DeHydrogenases, Short chain, [Score=115, Expect=1e-29]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=125, Expect=9e-34]} {RNA1509_17866} {RNA1310_24964.2, RNA1509_17866} {RNA1509_17866, RNA815_15051}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41278

1129

23.53

Mlig455_017268

Neo: -

Age: -

RDH14

Mlig455_017268 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=111.5]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=79.7]; KR domain [PF08659.12, score=28.4]; NAD dependent epimerase/dehydratase family [PF01370.23, score=18.5]} {Human: ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=131, Expect=3e-35]; ENSG00000186153, WWOX, WW domain containing oxidoreductase, [Score=128, Expect=2e-33]; ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=127, Expect=1e-33]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=128, Expect=2e-34]; ENSMUSG00000004637, Wwox, WW domain-containing oxidoreductase, [Score=123, Expect=8e-32]} {Dmel: FBgn0038610, CG7675, [RH, Score=140, Expect=2e-39]} {Celegans: WBGene00000985, dhs-22, DeHydrogenases, Short chain, [Score=115, Expect=1e-29]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=125, Expect=9e-34]} {RNA1509_17866} {RNA1310_24964.2, RNA1509_17866} {RNA1509_17866, RNA815_15051}

Cumulative graph for MligTC455_41278

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.69	4.81	0.41496	1.00000
RegionR2	-0.676	4.81	0.04019	0.23286
RegionR3	-0.037	4.81	0.88970	1.00000
RegionR4	0.531	4.81	0.08068	0.26648
RegionR5	0.629	4.81	0.00659	0.04266
RegionR6	0.174	4.81	0.51293	1.00000
RegionR7	-0.327	4.81	0.38031	1.00000
RegionR8	0.395	4.81	0.33021	0.96326

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.567	4.81	0.04183	0.67581
RegenerationR2	0.395	4.81	0.12769	0.55197
RegenerationR3	-0.106	4.81	0.70759	0.95073
RegenerationR4	-0.098	4.81	0.73248	0.96503
RegenerationR5	-0.394	4.81	0.11965	0.51851
RegenerationR6	-0.412	4.81	0.16326	0.49254
RegenerationBL	-0.537	4.81	0.15034	0.46311
RegenerationTP	-0.146	4.81	0.70113	1.00000

Genes with expression patterns similar to MligTC455_41278

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41278	1129	23.53	Mlig455_017268	Neo: - Age: -	RDH14	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017268 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=111.5]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=79.7]; KR domain [PF08659.12, score=28.4]; NAD dependent epimerase/dehydratase family [PF01370.23, score=18.5]} {Human: ENSG00000240857, RDH14, retinol dehydrogenase 14, [Score=131, Expect=3e-35]; ENSG00000186153, WWOX, WW domain containing oxidoreductase, [Score=128, Expect=2e-33]; ENSG00000139988, RDH12, retinol dehydrogenase 12, [Score=127, Expect=1e-33]} {Mouse: ENSMUSG00000020621, Rdh14, retinol dehydrogenase 14 (all-trans and 9-cis), [Score=128, Expect=2e-34]; ENSMUSG00000004637, Wwox, WW domain-containing oxidoreductase, [Score=123, Expect=8e-32]} {Dmel: FBgn0038610, CG7675, [RH, Score=140, Expect=2e-39]} {Celegans: WBGene00000985, dhs-22, DeHydrogenases, Short chain, [Score=115, Expect=1e-29]} {Smed: dd_Smed_v6_2096_0_1, dd_Smed_v6_2096_0_1, [Score=125, Expect=9e-34]} {RNA1509_17866} {RNA1310_24964.2, RNA1509_17866} {RNA1509_17866, RNA815_15051}
2.	MligTC455_31535	324	6.75	Mlig455_059558	Neo: - Age: Up-Down-Up		1.723	-	-	-	-	0.952	0.771	Mlig455_059558 {REF} {Length: 2663} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.0]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.9]; RmlD substrate binding domain [PF04321.19, score=19.7]; NAD(P)H-binding [PF13460.8, score=18.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=17.7]} {RNA1509_36496} {RNA1310_5934} {RNA815_37379}
3.	MligTC455_27805	674	14.03	Mlig455_011409	Neo: - Age: - Region-enriched R5: 1.698/0.03334		0.962	-	-	-	-	0.962	-	Mlig455_011409 {REF} {Length: 9920} {Pfam: Dynamin family [PF00350.25, score=35.5]} {Smed: dd_Smed_v6_8986_0_1, dd_Smed_v6_8986_0_1, [Score=62.4, Expect=1e-09]} {RNA1509_56405} {RNA1310_2471} {RNA815_743}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts