Data search
Results for MligTC455_41303
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41303 | 515 | 10.73 | Mlig455_027176 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.272/0.00286 |
Mlig455_027176 {REF} {Length: 3866} {RNA1509_40792} {RNA1310_4859} {RNA815_1523.1} |
Cumulative graph for MligTC455_41303
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.391 | 3.727 | 0.79100 | 1.00000 | |
| RegionR2 | -0.301 | 3.727 | 0.57725 | 0.93431 | |
| RegionR3 | -0.312 | 3.727 | 0.48490 | 0.98508 | |
| RegionR4 | 0.157 | 3.727 | 0.75914 | 1.00000 | |
| RegionR5 | 1.272 | 3.727 | 0.00020 | 0.00286 | |
| RegionR6 | 0.542 | 3.727 | 0.18346 | 0.74785 | |
| RegionR7 | -0.673 | 3.727 | 0.31494 | 0.94964 | |
| RegionR8 | -0.294 | 3.727 | 0.70707 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.082 | 3.727 | 0.96820 | 1.00000 | |
| RegenerationR2 | 0.383 | 3.727 | 0.33460 | 0.77038 | |
| RegenerationR3 | 0.146 | 3.727 | 0.75157 | 0.96514 | |
| RegenerationR4 | 0.248 | 3.727 | 0.59346 | 0.91014 | |
| RegenerationR5 | -0.149 | 3.727 | 0.68648 | 0.94633 | |
| RegenerationR6 | 0.47 | 3.727 | 0.27139 | 0.62168 | |
| RegenerationBL | 0.82 | 3.727 | 0.13346 | 0.43521 | |
| RegenerationTP | 0.627 | 3.727 | 0.34365 | 0.78648 |
Genes with expression patterns similar to MligTC455_41303
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41303 | 515 | 10.73 | Mlig455_027176 | Neo: - Age: Down-Up-Down Region-enriched R5: 1.272/0.00286 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027176 {REF} {Length: 3866} {RNA1509_40792} {RNA1310_4859} {RNA815_1523.1} | |
| 2. | MligTC455_41302 | 500 | 10.42 | Mlig455_015217 | Neo: - Age: - Region-enriched R5: 1.184/0.00692 |
PHLDB1 | 5.809 | 0.983 | 0.981 | 0.937 | 0.966 | 0.988 | 0.954 | Mlig455_015217 {REF} {Length: 4040} {Pfam: PH domain [PF00169.31, score=35.7]; Pleckstrin homology domain [PF15409.8, score=19.2]} {Human: ENSG00000019144, PHLDB1, pleckstrin homology like domain family B member 1, [RH, Score=156, Expect=4e-39]; ENSG00000144824, PHLDB2, pleckstrin homology like domain family B member 2, [RH, Score=154, Expect=5e-38]} {Mouse: ENSMUSG00000048537, Phldb1, pleckstrin homology like domain, family B, member 1, [RH, Score=157, Expect=1e-39]; ENSMUSG00000033149, Phldb2, pleckstrin homology like domain, family B, member 2, [RH, Score=152, Expect=2e-38]} {Dmel: FBgn0260748, CG5004, [RH, Score=126, Expect=3e-29]} {Smed: dd_Smed_v6_7833_0_1, dd_Smed_v6_7833_0_1, [Score=100, Expect=3e-22]} {RNA1509_10118, RNA1509_40792} {RNA1310_1799.2, RNA1509_10118, RNA1509_40792} {RNA1509_10118, RNA1509_40792, RNA815_1523.1} |
| 3. | MligTC455_44490 | 1470 | 30.62 | Mlig455_062156, Mlig455_062187 | Neo: - Age: - Region-enriched R5: 1.172/0.00492 |
DVL2, DVL3 | 1.731 | 0.779 | - | - | - | - | 0.952 | Mlig455_062156 {REF} {Length: 4519} {Pfam: Dishevelled specific domain [PF02377.17, score=83.8]; PDZ domain [PF00595.26, score=56.6]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=51.5]; DIX domain [PF00778.19, score=27.6]; PDZ domain [PF17820.3, score=24.1]} {Human: ENSG00000161202, DVL3, dishevelled segment polarity protein 3, [Score=346, Expect=2e-109]} {Mouse: ENSMUSG00000020888, Dvl2, dishevelled segment polarity protein 2, [RH, Score=345, Expect=4e-109]} {Dmel: FBgn0000499, dsh, dishevelled, [Score=282, Expect=2e-86]} {Celegans: WBGene00001101, dsh-1, DiSHevelled related, [RH, Score=244, Expect=4e-70]} {Smed: dd_Smed_v6_8730_0_1, dd_Smed_v6_8730_0_1, [Score=426, Expect=3e-140]} {RNA1509_27589, RNA1509_7983} {RNA1310_2405.1, RNA1509_27589} {RNA1509_27589, RNA815_999} Mlig455_062187 {REF} {Length: 5205} {Pfam: Dishevelled specific domain [PF02377.17, score=83.7]; DIX domain [PF00778.19, score=68.5]; PDZ domain [PF00595.26, score=57.1]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=51.4]; PDZ domain [PF17820.3, score=21.8]} {Human: ENSG00000004975, DVL2, dishevelled segment polarity protein 2, [RH, Score=369, Expect=7e-118]} {Mouse: ENSMUSG00000020888, Dvl2, dishevelled segment polarity protein 2, [RH, Score=372, Expect=7e-119]} {Dmel: FBgn0000499, dsh, dishevelled, [Score=283, Expect=1e-86]} {Celegans: WBGene00001101, dsh-1, DiSHevelled related, [Score=261, Expect=4e-78]} {Smed: dd_Smed_v6_8730_0_1, dd_Smed_v6_8730_0_1, [Score=453, Expect=4e-150]} {RNA1509_7983} {RNA1310_2405.1, RNA1509_7983} {RNA1509_7983, RNA815_999} |
| 4. | MligTC455_39283 | 352 | 7.34 | Mlig455_021710 | Neo: - Age: Down-Down-Up |
MAP2K5 | 1.668 | - | - | - | 0.703 | 0.965 | - | Mlig455_021710 {REF} {Length: 1858} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=201.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=133.0]; ABC1 atypical kinase-like domain [PF03109.18, score=31.9]; Fungal protein kinase [PF17667.3, score=24.6]; Kinase-like [PF14531.8, score=21.2]; PB1 domain [PF00564.26, score=20.6]} {Human: ENSG00000137764, MAP2K5, mitogen-activated protein kinase kinase 5, [RH, Score=282, Expect=6e-91]} {Mouse: ENSMUSG00000058444, Map2k5, mitogen-activated protein kinase kinase 5, [RH, Score=281, Expect=2e-90]} {Dmel: FBgn0010269, Dsor1, Downstream of raf1, [Score=197, Expect=9e-59]} {Celegans: WBGene00003186, mek-2, Dual specificity mitogen-activated protein kinase kinase mek-2, [Score=187, Expect=3e-55]} {Smed: dd_Smed_v6_8370_0_1, dd_Smed_v6_8370_0_1, [RH, Score=215, Expect=5e-65]} {RNA1509_17880} {RNA1310_15631} {RNA815_5851.1} |
| 5. | MligTC455_29524 | 363 | 7.57 | Mlig455_051259 | Neo: - Age: logFC(26M/2M)=-0.309 |
R3HCC1 | 1.664 | - | 0.711 | - | - | 0.953 | - | Mlig455_051259 {REF} {Length: 3258} {Human: ENSG00000104679, R3HCC1, R3H domain and coiled-coil containing 1, [RH, Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000034194, R3hcc1, R3H domain and coiled-coil containing 1, [RH, Score=57.4, Expect=4e-08]} {RNA1509_28279, RNA1509_51631} {RNA1310_928.1, RNA1509_28279} {RNA1509_28279, RNA815_529.1} |
| 6. | MligTC455_30496 | 506 | 10.54 | Mlig455_026882 | Neo: - Age: logFC(26M/2M)=0.358 Region-enriched R4: 2.152/0.01690 |
MYO6 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_026882 {REF} {Length: 5927} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=758.2]; Myosin VI cargo binding domain [PF16521.7, score=129.6]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.1]} {Human: ENSG00000196586, MYO6, myosin VI, [Score=910, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [Score=896, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [Score=881, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [Score=775, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [Score=844, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546} |
| 7. | MligTC455_16118 | 1091 | 22.74 | Mlig455_028642 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.243 Region-enriched R5: 1.259/0.00011 |
0.95 | 0.950 | - | - | - | - | - | Mlig455_028642 {REF} {Length: 1076} {TRANSSPLICED} {RNA1509_18638, RNA1509_19492, RNA1509_20788, RNA1509_36000} {RNA1310_29810, RNA1509_18638, RNA1509_19492, RNA1509_20788, RNA1509_36000} {RNA1509_18638, RNA1509_19492, RNA1509_20788, RNA1509_36000, RNA815_14686} |
Berezikov Lab - 2020-2021 © ERIBA