TomoSeq data search

Data search

Results for MligTC455_41332

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41332	1751	36.48	Mlig455_017845, Mlig455_047864	Neo: - Age: -	URM1	Mlig455_017845 {REF} {Length: 916} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225} Mlig455_047864 {REF} {Length: 915} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41332

1751

36.48

Mlig455_017845, Mlig455_047864

Neo: -

Age: -

URM1

Mlig455_017845 {REF} {Length: 916} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225}

Mlig455_047864 {REF} {Length: 915} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225}

Cumulative graph for MligTC455_41332

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.422	5.436	0.04963	0.52782
RegionR2	0.393	5.436	0.30755	0.69839
RegionR3	0.641	5.436	0.03892	0.34319
RegionR4	-0.477	5.436	0.19149	0.46724
RegionR5	0.627	5.436	0.02594	0.11674
RegionR6	0.346	5.436	0.26611	0.85405
RegionR7	0.086	5.436	0.80363	1.00000
RegionR8	-0.193	5.436	0.64389	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.066	5.436	0.06200	0.73428
RegenerationR2	-0.899	5.436	0.02207	0.24436
RegenerationR3	-0.848	5.436	0.03418	0.32798
RegenerationR4	-0.158	5.436	0.69676	0.95242
RegenerationR5	-1.182	5.436	0.00187	0.07422
RegenerationR6	-0.158	5.436	0.69072	0.91937
RegenerationBL	-0.673	5.436	0.14192	0.44917
RegenerationTP	-0.08	5.436	0.86142	1.00000

Genes with expression patterns similar to MligTC455_41332

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41332	1751	36.48	Mlig455_017845, Mlig455_047864	Neo: - Age: -	URM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_017845 {REF} {Length: 916} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225} Mlig455_047864 {REF} {Length: 915} {TRANSSPLICED} {Pfam: Urm1 (Ubiquitin related modifier) [PF09138.13, score=124.2]; ThiS family [PF02597.22, score=27.8]} {Human: ENSG00000167118, URM1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Mouse: ENSMUSG00000069020, Urm1, ubiquitin related modifier 1, [RH, Score=127, Expect=2e-39]} {Dmel: FBgn0053276, Urm1, Ubiquitin-related modifier 1, [RH, Score=135, Expect=1e-42]} {Celegans: WBGene00185048, urm-1, Ubiquitin-related modifier 1 homolog, [RH, Score=59.7, Expect=5e-13]} {Smed: dd_Smed_v6_3731_0_1, dd_Smed_v6_3731_0_1, [RH, Score=95.9, Expect=9e-28]} {RNA1509_33641} {RNA1310_7904.1} {RNA815_20225}
2.	MligTC455_21252	1122	23.38	Mlig455_058260	Neo: - Age: logFC(26M/2M)=-0.346	SEC63	0.953	-	-	-	-	-	0.953	Mlig455_058260 {REF} {Length: 3747} {Pfam: Sec63 Brl domain [PF02889.18, score=75.8]; DnaJ domain [PF00226.33, score=59.3]} {Human: ENSG00000025796, SEC63, SEC63 homolog, protein translocation regulator, [Score=531, Expect=1e-177]} {Mouse: ENSMUSG00000019802, Sec63, SEC63-like (S. cerevisiae), [Score=451, Expect=4e-147]} {Dmel: FBgn0035771, Sec63, Secretory 63, [RH, Score=131, Expect=3e-31]} {Celegans: WBGene00001047, dnj-29, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=449, Expect=1e-146]} {Smed: dd_Smed_v6_5466_0_1, dd_Smed_v6_5466_0_1, [Score=680, Expect=0.0]} {RNA1509_2737, RNA1509_30389, RNA1509_44718} {RNA1310_4242.1, RNA1509_2737, RNA1509_30389, RNA1509_44718} {RNA1509_2737, RNA1509_30389, RNA1509_44718, RNA815_2406}
3.	MligTC455_34113	1984	41.33	Mlig455_017524	Neo: - Age: -	EIF4B	0.953	-	-	-	-	-	0.953	Mlig455_017524 {REF} {Length: 4615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.1]} {Human: ENSG00000063046, EIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=3e-18]} {Mouse: ENSMUSG00000058655, Eif4b, eukaryotic translation initiation factor 4B, [RH, Score=90.5, Expect=2e-18]} {Dmel: FBgn0020660, eIF4B, eukaryotic translation initiation factor 4B, [RH, Score=90.1, Expect=7e-19]} {Smed: dd_Smed_v6_3282_1_1, dd_Smed_v6_3282_1_1, [Score=54.3, Expect=2e-07]} {RNA1509_29122} {RNA1310_2611} {RNA815_2592.1}
4.	MligTC455_23709	555	11.56	Mlig455_022629	Neo: - Age: -	MTMR12	0.95	-	-	-	-	-	0.950	Mlig455_022629 {REF} {Length: 5128} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=109.7]} {Human: ENSG00000150712, MTMR12, myotubularin related protein 12, [RH, Score=122, Expect=4e-28]} {Mouse: ENSMUSG00000039458, Mtmr12, myotubularin related protein 12, [RH, Score=119, Expect=2e-27]} {Dmel: FBgn0030582, CG14411, [Score=105, Expect=6e-23]} {Celegans: WBGene00021683, Y48G1C.10, [Score=74.3, Expect=2e-13]} {Smed: dd_Smed_v6_5322_0_1, dd_Smed_v6_5322_0_1, [Score=77.0, Expect=1e-14]} {RNA1509_10479} {RNA1310_7056, RNA1509_10479} {RNA1509_10479, RNA815_5460}