Data search


search
Exact
Search

Results for MligTC455_41341

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_41341 283 5.89 Mlig455_005049

Neo: -

Age: -

Mlig455_005049 {REF} {Length: 990} {RNA1509_878} {RNA1310_1011.1} {RNA815_289.1}

Cumulative graph for MligTC455_41341

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.517 3 0.09229 0.65207
RegionR2 -0.284 3 0.67886 1.00000
RegionR3 0.113 3 0.82564 1.00000
RegionR4 -1.394 3 0.08449 0.27494
RegionR5 -1.905 3 0.00184 0.01637
RegionR6 0.398 3 0.45631 1.00000
RegionR7 1.6 3 0.00911 0.16205
RegionR8 -1.044 3 0.38849 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.733 3 0.06385 0.73912
RegenerationR2 0.402 3 0.49382 0.86879
RegenerationR3 0.732 3 0.24198 0.67665
RegenerationR4 0.778 3 0.30369 0.74527
RegenerationR5 0.574 3 0.41725 0.81006
RegenerationR6 -0.23 3 0.70277 0.92598
RegenerationBL -0.454 3 0.60702 0.95308
RegenerationTP -0.027 3 0.98004 1.00000


Genes with expression patterns similar to MligTC455_41341

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_41341 283 5.89 Mlig455_005049

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_005049 {REF} {Length: 990} {RNA1509_878} {RNA1310_1011.1} {RNA815_289.1}
2. MligTC455_09045 28 0.58 Mlig455_030695

Neo: -

Age: -

Region-enriched R3: 3.801/0.03726

0.964 - - - - 0.964 - Mlig455_030695 {REF} {Length: 163} {NoTransDecoderORF}
3. MligTC455_30231 346 7.21 Mlig455_045544, Mlig455_052638, Mlig455_065708

Neo: -

Age: Up-Down-Up

BOLL 0.961 - - - - - 0.961

Mlig455_045544 {REF} {Length: 1980} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.0]; RNA recognition motif [PF16367.7, score=19.1]} {Human: ENSG00000152430, BOLL, boule homolog, RNA binding protein, [Score=100, Expect=1e-24]} {Mouse: ENSMUSG00000025977, Boll, boule homolog, RNA binding protein, [RH, Score=99.4, Expect=7e-26]} {Dmel: FBgn0011206, bol, boule, [Score=94.7, Expect=1e-23]} {Celegans: WBGene00000935, daz-1, DAZ protein 1, [Score=87.8, Expect=1e-19]} {Smed: dd_Smed_v6_10611_0_2, dd_Smed_v6_10611_0_2, [Score=104, Expect=7e-28]} {RNA1310_26111} {RNA815_42271}

Mlig455_052638 {REF} {Length: 7042} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.0]; RNA recognition motif [PF16367.7, score=19.1]} {Human: ENSG00000152430, BOLL, boule homolog, RNA binding protein, [Score=100, Expect=1e-24]} {Mouse: ENSMUSG00000025977, Boll, boule homolog, RNA binding protein, [RH, Score=99.4, Expect=7e-26]} {Dmel: FBgn0011206, bol, boule, [Score=94.7, Expect=1e-23]} {Celegans: WBGene00000935, daz-1, DAZ protein 1, [Score=87.8, Expect=1e-19]} {Smed: dd_Smed_v6_10611_0_2, dd_Smed_v6_10611_0_2, [Score=104, Expect=7e-28]} {RNA1509_26340} {RNA1310_26111} {RNA815_2054.1}

Mlig455_065708 {REF} {Length: 1990} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.0]; RNA recognition motif [PF16367.7, score=19.1]} {Human: ENSG00000152430, BOLL, boule homolog, RNA binding protein, [Score=100, Expect=2e-24]} {Mouse: ENSMUSG00000025977, Boll, boule homolog, RNA binding protein, [RH, Score=99.4, Expect=7e-26]} {Dmel: FBgn0011206, bol, boule, [Score=94.4, Expect=2e-23]} {Celegans: WBGene00000935, daz-1, DAZ protein 1, [Score=90.9, Expect=1e-20]} {Smed: dd_Smed_v6_10611_0_1, dd_Smed_v6_10611_0_1, [RH, Score=104, Expect=6e-28]} {RNA1310_26111} {RNA815_42271}
4. MligTC455_44963 18 0.38 Mlig455_070386

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_070386 {REF} {Length: 1852} {Pfam: Glycine rich protein [PF12810.9, score=22.8]} {RNA1310_33363.2} {RNA815_25152}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA