TomoSeq data search

Data search

Results for MligTC455_41432

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41432	6290	131.03	Mlig455_059289, Mlig455_065206	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.247	LSM3	Mlig455_059289 {REF} {Length: 683} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.9]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=4e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=3e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=7e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1310_29372.2, RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223, RNA815_14268.3} Mlig455_065206 {REF} {Length: 684} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.8]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=3e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=2e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=8e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_40068, RNA1509_9959} {RNA1310_29372.2, RNA1509_9959} {RNA1509_9959, RNA815_14268.3}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41432

6290

131.03

Mlig455_059289, Mlig455_065206

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.247

LSM3

Mlig455_059289 {REF} {Length: 683} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.9]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=4e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=3e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=7e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1310_29372.2, RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223, RNA815_14268.3}

Mlig455_065206 {REF} {Length: 684} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.8]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=3e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=2e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=8e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_40068, RNA1509_9959} {RNA1310_29372.2, RNA1509_9959} {RNA1509_9959, RNA815_14268.3}

Cumulative graph for MligTC455_41432

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.907	7.187	0.00043	0.06988
RegionR2	-0.155	7.187	0.62703	0.96845
RegionR3	0.239	7.187	0.36457	0.89898
RegionR4	0.911	7.187	0.00168	0.01566
RegionR5	0.996	7.187	0.00004	0.00084
RegionR6	0.563	7.187	0.03046	0.32297
RegionR7	-0.204	7.187	0.47651	1.00000
RegionR8	-0.443	7.187	0.17782	0.75836

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.056	7.187	0.94172	1.00000
RegenerationR2	-0.127	7.187	0.69137	0.95337
RegenerationR3	0.178	7.187	0.59405	0.90538
RegenerationR4	0.067	7.187	0.84176	1.00000
RegenerationR5	0.025	7.187	0.93859	1.00000
RegenerationR6	-0.237	7.187	0.47132	0.78543
RegenerationBL	0.398	7.187	0.17721	0.50520
RegenerationTP	0.706	7.187	0.03002	0.29129

Genes with expression patterns similar to MligTC455_41432

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41432	6290	131.03	Mlig455_059289, Mlig455_065206	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.247	LSM3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_059289 {REF} {Length: 683} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.9]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=4e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=152, Expect=3e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=7e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1310_29372.2, RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223} {RNA1509_12965, RNA1509_24120, RNA1509_40068, RNA1509_57223, RNA815_14268.3} Mlig455_065206 {REF} {Length: 684} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=69.8]} {Human: ENSG00000170860, LSM3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=3e-49]} {Mouse: ENSMUSG00000034192, Lsm3, LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=153, Expect=2e-49]} {Dmel: FBgn0051184, LSm3, Like Sm 3, [RH, Score=154, Expect=4e-50]} {Celegans: WBGene00003077, lsm-3, LSM Sm-like protein, [RH, Score=143, Expect=8e-46]} {Smed: dd_Smed_v6_1641_0_1, dd_Smed_v6_1641_0_1, [RH, Score=144, Expect=4e-46]} {RNA1509_40068, RNA1509_9959} {RNA1310_29372.2, RNA1509_9959} {RNA1509_9959, RNA815_14268.3}
2.	MligTC455_49700	5285	110.11	Mlig455_056895, Mlig455_056930	Neo: - Age: -	NECAP1	1.659	-	-	-	0.951	-	0.708	Mlig455_056895 {REF} {Length: 1453} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1681) [PF07933.16, score=184.1]} {Human: ENSG00000089818, NECAP1, NECAP endocytosis associated 1, [Score=243, Expect=1e-80]; ENSG00000157191, NECAP2, NECAP endocytosis associated 2, [Score=236, Expect=8e-78]} {Mouse: ENSMUSG00000030327, Necap1, NECAP endocytosis associated 1, [Score=244, Expect=3e-81]; ENSMUSG00000028923, Necap2, NECAP endocytosis associated 2, [Score=236, Expect=1e-77]} {Dmel: FBgn0030791, CG9132, [Score=214, Expect=1e-69]} {Celegans: WBGene00022453, ncap-1, NeCAP (NECAP) endocytosis associated protein homolog, [RH, Score=197, Expect=3e-63]} {Smed: dd_Smed_v6_4328_0_1, dd_Smed_v6_4328_0_1, [Score=224, Expect=3e-74]} {RNA1509_38206, RNA1509_6589} {RNA1310_21895, RNA1509_38206, RNA1509_6589} {RNA1509_38206, RNA1509_6589, RNA815_22017.1} Mlig455_056930 {REF} {Length: 1468} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1681) [PF07933.16, score=182.8]} {Human: ENSG00000089818, NECAP1, NECAP endocytosis associated 1, [Score=243, Expect=6e-81]; ENSG00000157191, NECAP2, NECAP endocytosis associated 2, [Score=237, Expect=4e-78]} {Mouse: ENSMUSG00000030327, Necap1, NECAP endocytosis associated 1, [Score=241, Expect=5e-80]; ENSMUSG00000028923, Necap2, NECAP endocytosis associated 2, [Score=236, Expect=5e-78]} {Dmel: FBgn0030791, CG9132, [Score=212, Expect=6e-69]} {Celegans: WBGene00022453, ncap-1, NeCAP (NECAP) endocytosis associated protein homolog, [RH, Score=196, Expect=4e-63]} {Smed: dd_Smed_v6_4328_0_1, dd_Smed_v6_4328_0_1, [Score=226, Expect=7e-75]} {RNA1509_24651, RNA1509_38713, RNA1509_48207, RNA1509_6589} {RNA1310_21895, RNA1509_24651, RNA1509_38713, RNA1509_48207} {RNA1509_24651, RNA1509_38713, RNA1509_48207, RNA815_22017.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_41432

6290

131.03

Mlig455_059289, Mlig455_065206

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.247

LSM3

1.000

MligTC455_49700

5285

110.11

Mlig455_056895, Mlig455_056930

Neo: -

Age: -

NECAP1

1.659

0.951

0.708

Mlig455_056895 {REF} {Length: 1453} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1681) [PF07933.16, score=184.1]} {Human: ENSG00000089818, NECAP1, NECAP endocytosis associated 1, [Score=243, Expect=1e-80]; ENSG00000157191, NECAP2, NECAP endocytosis associated 2, [Score=236, Expect=8e-78]} {Mouse: ENSMUSG00000030327, Necap1, NECAP endocytosis associated 1, [Score=244, Expect=3e-81]; ENSMUSG00000028923, Necap2, NECAP endocytosis associated 2, [Score=236, Expect=1e-77]} {Dmel: FBgn0030791, CG9132, [Score=214, Expect=1e-69]} {Celegans: WBGene00022453, ncap-1, NeCAP (NECAP) endocytosis associated protein homolog, [RH, Score=197, Expect=3e-63]} {Smed: dd_Smed_v6_4328_0_1, dd_Smed_v6_4328_0_1, [Score=224, Expect=3e-74]} {RNA1509_38206, RNA1509_6589} {RNA1310_21895, RNA1509_38206, RNA1509_6589} {RNA1509_38206, RNA1509_6589, RNA815_22017.1}

Mlig455_056930 {REF} {Length: 1468} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1681) [PF07933.16, score=182.8]} {Human: ENSG00000089818, NECAP1, NECAP endocytosis associated 1, [Score=243, Expect=6e-81]; ENSG00000157191, NECAP2, NECAP endocytosis associated 2, [Score=237, Expect=4e-78]} {Mouse: ENSMUSG00000030327, Necap1, NECAP endocytosis associated 1, [Score=241, Expect=5e-80]; ENSMUSG00000028923, Necap2, NECAP endocytosis associated 2, [Score=236, Expect=5e-78]} {Dmel: FBgn0030791, CG9132, [Score=212, Expect=6e-69]} {Celegans: WBGene00022453, ncap-1, NeCAP (NECAP) endocytosis associated protein homolog, [RH, Score=196, Expect=4e-63]} {Smed: dd_Smed_v6_4328_0_1, dd_Smed_v6_4328_0_1, [Score=226, Expect=7e-75]} {RNA1509_24651, RNA1509_38713, RNA1509_48207, RNA1509_6589} {RNA1310_21895, RNA1509_24651, RNA1509_38713, RNA1509_48207} {RNA1509_24651, RNA1509_38713, RNA1509_48207, RNA815_22017.1}