Data search
Results for MligTC455_41459
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41459 | 502 | 10.47 | Mlig455_029630 | Neo: - Age: - |
FEZ2 | Mlig455_029630 {REF} {Length: 3406} {TRANSSPLICED} {Pfam: FEZ-like protein [PF07763.15, score=82.0]} {Human: ENSG00000171055, FEZ2, fasciculation and elongation protein zeta 2, [RH, Score=70.9, Expect=4e-13]; ENSG00000149557, FEZ1, fasciculation and elongation protein zeta 1, [RH, Score=68.2, Expect=3e-12]} {Mouse: ENSMUSG00000032118, Fez1, fasciculation and elongation protein zeta 1 (zygin I), [RH, Score=68.6, Expect=2e-12]} {Dmel: FBgn0040395, Unc-76, [RH, Score=97.4, Expect=3e-22]} {Celegans: WBGene00006808, unc-76, UNC-76, [RH, Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_10575_0_1, dd_Smed_v6_10575_0_1, [Score=52.8, Expect=1e-07]} {RNA1509_35362, RNA1509_39958, RNA1509_49236} {RNA1310_14555, RNA1509_35362, RNA1509_39958, RNA1509_49236} {RNA1509_35362, RNA1509_39958, RNA1509_49236, RNA815_7055.1} |
Cumulative graph for MligTC455_41459
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.584 | 3.752 | 0.01732 | 0.36749 | |
| RegionR2 | 1.661 | 3.752 | 0.03375 | 0.21019 | |
| RegionR3 | 0.64 | 3.752 | 0.46436 | 0.97296 | |
| RegionR4 | 0.095 | 3.752 | 0.81207 | 1.00000 | |
| RegionR5 | 1.511 | 3.752 | 0.01276 | 0.06907 | |
| RegionR6 | 1.305 | 3.752 | 0.06925 | 0.49095 | |
| RegionR7 | 1.166 | 3.752 | 0.18553 | 0.78658 | |
| RegionR8 | 1.205 | 3.752 | 0.22837 | 0.83986 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.878 | 3.752 | 0.99991 | 1.00000 | |
| RegenerationR2 | 0.587 | 3.752 | 0.17311 | 0.61307 | |
| RegenerationR3 | 0.153 | 3.752 | 0.77205 | 0.97230 | |
| RegenerationR4 | 0.361 | 3.752 | 0.47997 | 0.85863 | |
| RegenerationR5 | -0.161 | 3.752 | 0.71891 | 0.95891 | |
| RegenerationR6 | 0.224 | 3.752 | 0.65115 | 0.89906 | |
| RegenerationBL | 1.436 | 3.752 | 0.00404 | 0.05701 | |
| RegenerationTP | 0.968 | 3.752 | 0.09989 | 0.49180 |
Genes with expression patterns similar to MligTC455_41459
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41459 | 502 | 10.47 | Mlig455_029630 | Neo: - Age: - |
FEZ2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_029630 {REF} {Length: 3406} {TRANSSPLICED} {Pfam: FEZ-like protein [PF07763.15, score=82.0]} {Human: ENSG00000171055, FEZ2, fasciculation and elongation protein zeta 2, [RH, Score=70.9, Expect=4e-13]; ENSG00000149557, FEZ1, fasciculation and elongation protein zeta 1, [RH, Score=68.2, Expect=3e-12]} {Mouse: ENSMUSG00000032118, Fez1, fasciculation and elongation protein zeta 1 (zygin I), [RH, Score=68.6, Expect=2e-12]} {Dmel: FBgn0040395, Unc-76, [RH, Score=97.4, Expect=3e-22]} {Celegans: WBGene00006808, unc-76, UNC-76, [RH, Score=77.8, Expect=4e-16]} {Smed: dd_Smed_v6_10575_0_1, dd_Smed_v6_10575_0_1, [Score=52.8, Expect=1e-07]} {RNA1509_35362, RNA1509_39958, RNA1509_49236} {RNA1310_14555, RNA1509_35362, RNA1509_39958, RNA1509_49236} {RNA1509_35362, RNA1509_39958, RNA1509_49236, RNA815_7055.1} |
| 2. | MligTC455_33607 | 482 | 10.03 | Mlig455_064683 | Neo: Int S/G2/M Age: - |
KDM1A | 2.573 | - | - | - | 0.954 | 0.805 | 0.814 | Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019} |
| 3. | MligTC455_46474 | 870 | 18.12 | Mlig455_015932, Mlig455_059696 | Neo: - Age: Down-Up-Down |
2.509 | - | 0.728 | 0.822 | - | - | 0.959 | Mlig455_015932 {REF} {Length: 2442} {TRANSSPLICED} {RNA1509_28238, RNA1509_53688} {RNA1310_20972, RNA1509_28238, RNA1509_53688} {RNA1509_28238, RNA1509_53688, RNA815_8774} Mlig455_059696 {REF} {Length: 2441} {TRANSSPLICED} {RNA1509_28238} {RNA1310_20972} {RNA815_8774} |
|
| 4. | MligTC455_33606 | 491 | 10.23 | Mlig455_064651 | Neo: - Age: - |
KDM1A | 1.819 | - | - | - | 0.953 | 0.866 | - | Mlig455_064651 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=193.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=58.0]; FAD dependent oxidoreductase [PF01266.26, score=29.7]; FAD binding domain [PF00890.26, score=28.8]; Thi4 family [PF01946.19, score=27.9]; FAD binding domain [PF01494.21, score=25.8]; FAD dependent oxidoreductase [PF12831.9, score=23.4]; HI0933-like protein [PF03486.16, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=19.8]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=112, Expect=2e-25]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=2e-136]} {RNA1509_26570} {RNA1310_9348, RNA1509_26570} {RNA1509_26570, RNA815_2019} |
| 5. | MligTC455_42790 | 860 | 17.92 | Mlig455_001416 | Neo: - Age: - |
WDR5 | 1.738 | - | - | - | 0.950 | - | 0.788 | Mlig455_001416 {REF} {Length: 1676} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=206.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=84.4]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=48.2]; Nucleoporin Nup120/160 [PF11715.10, score=46.4]; WD40-like domain [PF17005.7, score=26.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=24.5]} {Human: ENSG00000196363, WDR5, WD repeat domain 5, [RH, Score=581, Expect=0.0]} {Mouse: ENSMUSG00000026917, Wdr5, WD repeat domain 5, [RH, Score=581, Expect=0.0]} {Dmel: FBgn0040066, wds, will die slowly, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006474, wdr-5.1, WD repeat-containing protein wdr-5.1, [RH, Score=460, Expect=5e-163]} {Smed: dd_Smed_v6_2866_0_1, dd_Smed_v6_2866_0_1, [RH, Score=541, Expect=0.0]} {RNA1509_14300, RNA1509_46519} {RNA1310_18453, RNA1509_14300, RNA1509_46519} {RNA1509_14300, RNA1509_46519, RNA815_7409} |
| 6. | MligTC455_47663 | 596 | 12.43 | Mlig455_021670, Mlig455_021718 | Neo: - Age: - |
PCDH11X | 1.698 | - | - | - | 0.951 | - | 0.747 | Mlig455_021670 {REF} {Length: 3779} {Pfam: Cadherin domain [PF00028.19, score=254.9]; Cadherin-like [PF08266.14, score=48.8]; Cadherin-like [PF16184.7, score=19.2]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=259, Expect=2e-70]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=259, Expect=2e-70]; ENSG00000156453, PCDH1, protocadherin 1, [Score=251, Expect=2e-68]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=254, Expect=2e-69]} {Dmel: FBgn0284247, ds, dachsous, [Score=229, Expect=1e-60]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=157, Expect=3e-38]} {Smed: dd_Smed_v6_11605_0_1, dd_Smed_v6_11605_0_1, [RH, Score=333, Expect=6e-97]} {RNA1509_22718} {RNA1310_3245} {RNA815_7122} Mlig455_021718 {REF} {Length: 3958} {Pfam: Cadherin domain [PF00028.19, score=259.1]; Cadherin-like [PF08266.14, score=51.8]; Cadherin-like [PF16184.7, score=21.2]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=259, Expect=1e-71]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=258, Expect=5e-72]; ENSG00000156453, PCDH1, protocadherin 1, [Score=251, Expect=7e-70]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=256, Expect=1e-71]} {Dmel: FBgn0284247, ds, dachsous, [Score=231, Expect=1e-62]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=155, Expect=2e-38]} {Smed: dd_Smed_v6_13155_0_1, dd_Smed_v6_13155_0_1, [RH, Score=318, Expect=1e-94]} {RNA1509_22718} {RNA1310_3245} {RNA815_7122} |
| 7. | MligTC455_40070 | 543 | 11.32 | Mlig455_016433 | Neo: - Age: Down-Up-Up |
0.969 | - | - | - | 0.969 | - | - | Mlig455_016433 {REF} {Length: 976} {TRANSSPLICED} {Pfam: CHD5-like protein [PF04420.16, score=26.4]} {RNA1509_34703, RNA1509_38656} {RNA1310_37016.1, RNA1509_34703, RNA1509_38656} {RNA1509_34703, RNA1509_38656, RNA815_17409} | |
| 8. | MligTC455_19780 | 3124 | 65.08 | Mlig455_029145 | Neo: Irradiation Age: Down-Up-Down Regeneration-upregulated BL: 2.116 Regeneration-enriched BL: 2.116 |
CPEB4 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_029145 {REF} {Length: 3447} {TRANSSPLICED} {Pfam: RNA recognition motif [PF16367.7, score=105.6]; Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=68.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=45.9]} {Human: ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [Score=354, Expect=9e-115]; ENSG00000107864, CPEB3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=2e-109]; ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=2e-109]} {Mouse: ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [Score=355, Expect=2e-115]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=353, Expect=1e-114]; ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [Score=347, Expect=1e-110]} {Dmel: FBgn0264307, orb2, [Score=341, Expect=5e-112]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [Score=234, Expect=7e-71]} {Smed: dd_Smed_v6_8889_0_2, dd_Smed_v6_8889_0_2, [Score=362, Expect=8e-123]} {RNA1509_10206, RNA1509_27985, RNA1509_46969} {RNA1310_3643.1, RNA1509_27985, RNA1509_46969} {RNA1509_27985, RNA1509_46969, RNA815_9479} |
| 9. | MligTC455_43280 | 200 | 4.16 | Mlig455_013642 | Neo: - |
APCDD1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_013642 {REF} {Length: 2548} {Pfam: Adenomatosis polyposis coli down-regulated 1 [PF14921.8, score=196.3]} {Human: ENSG00000154856, APCDD1, APC down-regulated 1, [Score=180, Expect=3e-50]} {Mouse: ENSMUSG00000071847, Apcdd1, adenomatosis polyposis coli down-regulated 1, [Score=186, Expect=2e-52]} {RNA1509_39073} {RNA1310_8576} {RNA815_5973} |
| 10. | MligTC455_39153 | 43 | 0.9 | Mlig455_041661 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_041661 {REF} {Length: 1670} {RNA1509_56316} {RNA1310_3607.1, RNA1509_56316} {RNA1509_56316, RNA815_31436} | |
| 11. | MligTC455_28718 | 705 | 14.7 | Mlig455_064406 | Neo: - Age: Up-Down-Down |
NBEA | 0.953 | - | - | - | 0.953 | - | - | Mlig455_064406 {REF} {Length: 5538} {Pfam: Beige/BEACH domain [PF02138.20, score=402.3]; PH domain associated with Beige/BEACH [PF14844.8, score=61.1]; WD domain, G-beta repeat [PF00400.34, score=43.3]} {Human: ENSG00000172915, NBEA, neurobeachin, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000027799, Nbea, neurobeachin, [Score=915, Expect=0.0]} {Dmel: FBgn0266098, rg, rugose, [Score=1054, Expect=0.0]} {Celegans: WBGene00004760, sel-2, Putative neurobeachin homolog, [Score=825, Expect=0.0]} {Smed: dd_Smed_v6_3880_0_1, dd_Smed_v6_3880_0_1, [Score=1006, Expect=0.0]} {RNA1509_10508, RNA1509_49991} {RNA1310_12428, RNA1509_49991} {RNA1509_49991, RNA815_4322} |
| 12. | MligTC455_46007 | 1095 | 22.82 | Mlig455_015551 | Neo: - Age: - Regeneration-upregulated BL: 1.762 Regeneration-enriched BL: 1.762 |
RBMS3 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_015551 {REF} {Length: 2417} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.0]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [RH, Score=114, Expect=3e-27]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [RH, Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [RH, Score=115, Expect=8e-28]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [RH, Score=113, Expect=5e-27]} {Dmel: FBgn0052423, shep, alan shepard, [Score=100, Expect=4e-22]} {Celegans: WBGene00006331, sup-26, SUPpressor, [RH, Score=118, Expect=9e-29]} {Smed: dd_Smed_v6_2612_0_1, dd_Smed_v6_2612_0_1, [RH, Score=109, Expect=2e-25]} {RNA1509_18229} {RNA1310_2231} {RNA815_12809} |
| 13. | MligTC455_42448 | 849 | 17.69 | Mlig455_031562 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_031562 {REF} {Length: 2282} {RNA1509_30650} {RNA1310_36875.1} {RNA815_12020} | |
| 14. | MligTC455_46367 | 535 | 11.15 | Mlig455_066511 | Neo: - Age: logFC(26M/2M)=-0.381 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_066511 {REF} {Length: 4295} {RNA1509_38263, RNA1509_51270} {RNA1310_46161.1, RNA1509_51270} {RNA1509_51270, RNA815_23835} | |
| 15. | MligTC455_53492 | 4379 | 91.23 | Mlig455_019974 | Neo: - Age: - Regeneration-upregulated BL: 1.552 Regeneration-enriched BL: 1.552 |
JUP | 0.952 | - | - | - | 0.952 | - | - | Mlig455_019974 {REF} {Length: 3954} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=81.6]; Domain of unknown function (DUF3361) [PF11841.10, score=25.6]; Adaptin N terminal region [PF01602.22, score=20.7]; Spinocerebellar ataxia type 10 protein domain [PF09759.11, score=20.1]} {Human: ENSG00000173801, JUP, junction plakoglobin, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000001552, Jup, junction plakoglobin, [RH, Score=442, Expect=1e-143]} {Dmel: FBgn0000117, arm, armadillo, [Score=456, Expect=2e-149]} {Celegans: WBGene00001979, hmp-2, Beta-catenin-like protein hmp-2, [RH, Score=225, Expect=4e-63]} {Smed: dd_Smed_v6_2688_0_1, dd_Smed_v6_2688_0_1, [RH, Score=407, Expect=3e-128]} {RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628} {RNA1310_2400.1, RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628} {RNA1509_17882, RNA1509_29435, RNA1509_30595, RNA1509_3591, RNA1509_6062, RNA1509_7628, RNA815_2793} |
| 16. | MligTC455_42133 | 321 | 6.69 | Mlig455_022186 | Neo: - Age: - |
ZNF207 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_022186 {REF} {Length: 2559} {TRANSSPLICED} {Human: ENSG00000010244, ZNF207, zinc finger protein 207, [RH, Score=182, Expect=6e-53]} {Mouse: ENSMUSG00000017421, Zfp207, zinc finger protein 207, [RH, Score=182, Expect=6e-53]} {Dmel: FBgn0032600, BuGZ, Bub3 interacting GLEBS and Zinc finger domain protein, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00007105, B0035.1, [RH, Score=159, Expect=3e-46]} {Smed: dd_Smed_v6_4303_0_1, dd_Smed_v6_4303_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_46140, RNA1509_53527} {RNA1310_10471, RNA1509_46140, RNA1509_53527} {RNA1509_46140, RNA1509_53527, RNA815_7461} |
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