Data search
Results for MligTC455_41465
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41465 | 1246 | 25.95 | Mlig455_065387 | Neo: - Age: Down-Up-Up |
EIF2B1 | Mlig455_065387 {REF} {Length: 1110} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=187.7]} {Human: ENSG00000111361, EIF2B1, eukaryotic translation initiation factor 2B subunit alpha, [RH, Score=219, Expect=1e-69]} {Mouse: ENSMUSG00000029388, Eif2b1, eukaryotic translation initiation factor 2B, subunit 1 (alpha), [RH, Score=225, Expect=6e-72]} {Dmel: FBgn0039726, eIF2Balpha, eukaryotic translation initiation factor 2B subunit alpha, [RH, Score=234, Expect=1e-75]} {Celegans: WBGene00014221, eif-2Balpha, Probable translation initiation factor eIF-2B subunit alpha, [RH, Score=203, Expect=7e-64]} {Smed: dd_Smed_v6_4682_0_1, dd_Smed_v6_4682_0_1, [RH, Score=154, Expect=9e-45]} {RNA1509_10109, RNA1509_33320} {RNA1310_29342.1, RNA1509_10109, RNA1509_33320} {RNA1509_10109, RNA1509_33320, RNA815_5181} |
Cumulative graph for MligTC455_41465
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.711 | 4.852 | 0.33986 | 0.98504 | |
| RegionR2 | -0.545 | 4.852 | 0.14907 | 0.48215 | |
| RegionR3 | -0.319 | 4.852 | 0.31327 | 0.85257 | |
| RegionR4 | 0.401 | 4.852 | 0.25930 | 0.56137 | |
| RegionR5 | 0.818 | 4.852 | 0.00249 | 0.02057 | |
| RegionR6 | 0.201 | 4.852 | 0.51037 | 1.00000 | |
| RegionR7 | -0.098 | 4.852 | 0.80889 | 1.00000 | |
| RegionR8 | -1.168 | 4.852 | 0.04574 | 0.41931 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.656 | 4.852 | 0.50779 | 1.00000 | |
| RegenerationR2 | 0.094 | 4.852 | 0.78156 | 0.98373 | |
| RegenerationR3 | 0.466 | 4.852 | 0.19699 | 0.63203 | |
| RegenerationR4 | 0.253 | 4.852 | 0.47861 | 0.85798 | |
| RegenerationR5 | -0.533 | 4.852 | 0.09834 | 0.47911 | |
| RegenerationR6 | 0.089 | 4.852 | 0.80539 | 0.98010 | |
| RegenerationBL | 0.407 | 4.852 | 0.33645 | 0.70303 | |
| RegenerationTP | 1.028 | 4.852 | 0.02657 | 0.27451 |
Genes with expression patterns similar to MligTC455_41465
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41465 | 1246 | 25.95 | Mlig455_065387 | Neo: - Age: Down-Up-Up |
EIF2B1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065387 {REF} {Length: 1110} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=187.7]} {Human: ENSG00000111361, EIF2B1, eukaryotic translation initiation factor 2B subunit alpha, [RH, Score=219, Expect=1e-69]} {Mouse: ENSMUSG00000029388, Eif2b1, eukaryotic translation initiation factor 2B, subunit 1 (alpha), [RH, Score=225, Expect=6e-72]} {Dmel: FBgn0039726, eIF2Balpha, eukaryotic translation initiation factor 2B subunit alpha, [RH, Score=234, Expect=1e-75]} {Celegans: WBGene00014221, eif-2Balpha, Probable translation initiation factor eIF-2B subunit alpha, [RH, Score=203, Expect=7e-64]} {Smed: dd_Smed_v6_4682_0_1, dd_Smed_v6_4682_0_1, [RH, Score=154, Expect=9e-45]} {RNA1509_10109, RNA1509_33320} {RNA1310_29342.1, RNA1509_10109, RNA1509_33320} {RNA1509_10109, RNA1509_33320, RNA815_5181} |
| 2. | MligTC455_27605 | 24706 | 514.71 | Mlig455_011159 | Neo: Int S/G2/M Age: - |
RPS27A | 0.954 | - | - | - | 0.954 | - | - | Mlig455_011159 {REF} {Length: 658} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=116.0]; Ribosomal protein S27a [PF01599.21, score=81.1]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=59.9]; Ubiquitin-like domain [PF14560.8, score=26.4]; Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=20.8]} {Human: ENSG00000143947, RPS27A, ribosomal protein S27a, [RH, Score=242, Expect=7e-83]; ENSG00000231767, AL136454.1, novel protein similar to ribosomal protein S27a RPS27A, [RH, Score=232, Expect=6e-79]} {Mouse: ENSMUSG00000020460, Rps27a, ribosomal protein S27A, [RH, Score=239, Expect=4e-82]} {Dmel: FBgn0003942, RpS27A, Ribosomal protein S27A, [RH, Score=248, Expect=2e-85]} {Celegans: WBGene00006725, ubl-1, Ubiquitin-like protein 1-40S ribosomal protein S27a Ubiquitin-like protein 1 40S ribosomal protein S27a, [RH, Score=152, Expect=1e-47]} {Smed: dd_Smed_v6_121_0_1, dd_Smed_v6_121_0_1, [RH, Score=213, Expect=3e-72]} {RNA1509_13546, RNA1509_29899, RNA1509_413, RNA1509_7014, RNA1509_9838} {RNA1310_34350.2, RNA1509_13546, RNA1509_29899, RNA1509_413, RNA1509_7014, RNA1509_9838} {RNA1509_13546, RNA1509_29899, RNA1509_413, RNA1509_7014, RNA1509_9838, RNA815_25604.2} |
| 3. | MligTC455_24724 | 1230 | 25.63 | Mlig455_053763 | Neo: - Age: - |
APEH | 0.952 | - | - | - | - | - | 0.952 | Mlig455_053763 {REF} {Length: 3196} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=101.4]; Acylamino-acid-releasing enzyme, N-terminal domain [PF19283.1, score=59.6]; Serine aminopeptidase, S33 [PF12146.10, score=34.8]; alpha/beta hydrolase fold [PF00561.22, score=25.0]; X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=18.3]} {Human: ENSG00000164062, APEH, acylaminoacyl-peptide hydrolase, [Score=413, Expect=3e-131]} {Mouse: ENSMUSG00000032590, Apeh, acylpeptide hydrolase, [Score=431, Expect=3e-138]} {Celegans: WBGene00001058, dpf-5, Dipeptidyl Peptidase Four (IV) family, [Score=315, Expect=8e-95]} {Smed: dd_Smed_v6_8116_0_1, dd_Smed_v6_8116_0_1, [Score=420, Expect=8e-135]} {RNA1509_5695} {RNA1310_6241} {RNA815_2430} |
Berezikov Lab - 2020-2021 © ERIBA